Click here to switch to the map view.

The map label for this gene is 119386107

Identifier: 119386107

GI number: 119386107

Start: 540885

End: 541514

Strand: Direct

Name: 119386107

Synonym: Pden_3395

Alternate gene names: NA

Gene position: 540885-541514 (Clockwise)

Preceding gene: 119386103

Following gene: 119386109

Centisome position: 31.26

GC content: 64.76

Gene sequence:

>630_bases
GTGACCCGGTCCAAGCTGGAGATCGCTGACATCTTCCGACGATACGGCCCCGCGTGGCGGCGGGCCAATGCCGGGCATGT
CAGCCTGACCCAGCTGAAGGTGATGTCGGCCATCGAGGCCTGCCGGATCGAGGCGCTTGGCGGGCATGTGGCTGCCTGCG
GCAAGTGCGGCCACCACCATATTGCCTATAACAGCTGCAAGAACCGGCATTGCCCGAAGTGTCAGGCACCGGCAGCGCGT
GACTGGATGGAGGCGCGCGCCGATGACCTGCTGCCCGTCGAGTATTTCCACGTCGTCTTTACCCTGCCGGCCAGGATCGC
GCAGATCGCCTTCTGGAACAAGAGGGCGGTGTGTAGGCTGCTGTTCAAGGGTGAGGGCATGACTGCCATCGGTCCGAAGG
AATGCCCGAACGCGGAAACGGTGACGACCATCGCCGCCGATCCAAAGCGGTTGGGTGCGCGGATCGGCATGACGGCGGTG
CTGCACACCTGGGGATCGGCGCTGACACATCATCCGCACACCCTGCGCGAACCATGTCCTTGCTGCGGCGGCCCGATGCG
CATCGTCGAGATCTTCCGTCGCGGGCAAAAACCCTCATCCCGCGATCCGCCCCGGGAGAAAGCCGCATGA

Upstream 100 bases:

>100_bases
CGCCACCAAGACGATCCGCGATACCGTCAGCCCTTACGAGATGCTGGCCAAGTTGCAGGATCAGACGGTGAAGCGAAGCC
TGGAGTGACCGTCGCCGGGC

Downstream 100 bases:

>100_bases
CGAGACGCTCGTCACTGTCGAAAGAAATGTCCCGGGGCTTGACCGCAAGCCGGATCACCTCCGGCTTGCCCGCTGCCGCG
ATCGGCCCGAAAATGCATCG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTRSKLEIADIFRRYGPAWRRANAGHVSLTQLKVMSAIEACRIEALGGHVAACGKCGHHHIAYNSCKNRHCPKCQAPAAR
DWMEARADDLLPVEYFHVVFTLPARIAQIAFWNKRAVCRLLFKGEGMTAIGPKECPNAETVTTIAADPKRLGARIGMTAV
LHTWGSALTHHPHTLREPCPCCGGPMRIVEIFRRGQKPSSRDPPREKAA

Sequences:

>Translated_209_residues
MTRSKLEIADIFRRYGPAWRRANAGHVSLTQLKVMSAIEACRIEALGGHVAACGKCGHHHIAYNSCKNRHCPKCQAPAAR
DWMEARADDLLPVEYFHVVFTLPARIAQIAFWNKRAVCRLLFKGEGMTAIGPKECPNAETVTTIAADPKRLGARIGMTAV
LHTWGSALTHHPHTLREPCPCCGGPMRIVEIFRRGQKPSSRDPPREKAA
>Mature_208_residues
TRSKLEIADIFRRYGPAWRRANAGHVSLTQLKVMSAIEACRIEALGGHVAACGKCGHHHIAYNSCKNRHCPKCQAPAARD
WMEARADDLLPVEYFHVVFTLPARIAQIAFWNKRAVCRLLFKGEGMTAIGPKECPNAETVTTIAADPKRLGARIGMTAVL
HTWGSALTHHPHTLREPCPCCGGPMRIVEIFRRGQKPSSRDPPREKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 23138; Mature: 23007

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSKLEIADIFRRYGPAWRRANAGHVSLTQLKVMSAIEACRIEALGGHVAACGKCGHHH
CCCCHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
IAYNSCKNRHCPKCQAPAARDWMEARADDLLPVEYFHVVFTLPARIAQIAFWNKRAVCRL
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LFKGEGMTAIGPKECPNAETVTTIAADPKRLGARIGMTAVLHTWGSALTHHPHTLREPCP
HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
CCGGPMRIVEIFRRGQKPSSRDPPREKAA
CCCCHHHHHHHHHCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
TRSKLEIADIFRRYGPAWRRANAGHVSLTQLKVMSAIEACRIEALGGHVAACGKCGHHH
CCCHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
IAYNSCKNRHCPKCQAPAARDWMEARADDLLPVEYFHVVFTLPARIAQIAFWNKRAVCRL
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LFKGEGMTAIGPKECPNAETVTTIAADPKRLGARIGMTAVLHTWGSALTHHPHTLREPCP
HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
CCGGPMRIVEIFRRGQKPSSRDPPREKAA
CCCCHHHHHHHHHCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]