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The map label for this gene is yqhC [C]

Identifier: 119386095

GI number: 119386095

Start: 526818

End: 527030

Strand: Direct

Name: yqhC [C]

Synonym: Pden_3381

Alternate gene names: 119386095

Gene position: 526818-527030 (Clockwise)

Preceding gene: 119386093

Following gene: 119386103

Centisome position: 30.45

GC content: 64.79

Gene sequence:

>213_bases
ATGACGCCGGTTCAGTACCAGAAACAGCTTCGGCTGCAGGAGGCGCGCCGCCTGCTGCTCTCAGACGACGCCGATGTCGC
CCGGATCGGCTACGCCATCGGCTATGAGAGCCCGTCGCAGTTCAGCCGGGAATATCGCCGCCTGTTCGGATCACCGCCGG
GACGGGATGGGCAGCAGATCCGAAGAAGCCTCACCTCGCAGGTAGAGGGCTGA

Upstream 100 bases:

>100_bases
TTGTGCCCACGCTTCGATCTGGCCAACAATCGGCTGACCAGCCTGCACAACATCCGCGAGCCCCGCGACCTTCCACCGCC
ATTTCAAGGTGGTCACGGCG

Downstream 100 bases:

>100_bases
GGGGGGCGGCGACATGTCAGGCGGGAAGCGGGCCTTCGCTGCGGAGGGGACGAACGACCACACCCGCCCCAGCAAACCCT
GATCGACAGAGAAGGTCGAG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: AraC-Like Transcriptional Regulator; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MTPVQYQKQLRLQEARRLLLSDDADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQQIRRSLTSQVEG

Sequences:

>Translated_70_residues
MTPVQYQKQLRLQEARRLLLSDDADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQQIRRSLTSQVEG
>Mature_69_residues
TPVQYQKQLRLQEARRLLLSDDADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQQIRRSLTSQVEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082197, Length=60, Percent_Identity=43.3333333333333, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8044; Mature: 7913

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVQYQKQLRLQEARRLLLSDDADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQQI
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH
RRSLTSQVEG
HHHHHHHCCC
>Mature Secondary Structure 
TPVQYQKQLRLQEARRLLLSDDADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQQI
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH
RRSLTSQVEG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA