Click here to switch to the map view.

The map label for this gene is 119386093

Identifier: 119386093

GI number: 119386093

Start: 525917

End: 526351

Strand: Direct

Name: 119386093

Synonym: Pden_3379

Alternate gene names: NA

Gene position: 525917-526351 (Clockwise)

Preceding gene: 119386092

Following gene: 119386095

Centisome position: 30.4

GC content: 65.52

Gene sequence:

>435_bases
TTGTATTTGCTCGACACCAATATTCTCTCGGCCTTCGCGCCGACGCGGCGTGATGCCGATGCCGAGGCTCTTGCCGCCTG
GATGCGCGCCCAGAGCGACCGGCTCTATCTCTCGGCCATCTCCATCGCCGAGATCGAGGCCGGCATTGCCCGCGCAATCA
GGATCGGCGCGAGTACCAAGGCCCCGGCGTTGCGCCGCTGGCTGGCCGCCGTCGAGCATTTCTATGCCAGCCGGATCCTG
CCTTTCGGCATTGAGGAAGCGCGTCATGCCGGCGCGATCCTCGACCGGGCGCGCGCCCATGATCCGGGTTTCGAGGATAT
TGCTATCGCCGCCACGGCCGCCGCGCATGGCCTGACGGTGATGACCGCCAACGAACGGCATTTCGCACCGCTGGGGGTGC
CTTACGTCAACCCACTGAAGGAACTGCCCGCATAG

Upstream 100 bases:

>100_bases
TTTCGCCGATCTGCTGCTGGCCTTCCCCGGCGATGCGGAGGACATCCCCGAACGCGCCCGCAAGCCTGCGCGGGCGCTGC
GGGATCCGGGCCTCTGAAGC

Downstream 100 bases:

>100_bases
CGGCAGGGGGTGCGGGGAAGACACCGCTTGATGACAGTCGGGAAACCGGAGAGCAGCGCTCAACGAAACCGGGTATGACC
AGCGGGGCGGCTATGCGGGA

Product: PilT domain-containing protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MYLLDTNILSAFAPTRRDADAEALAAWMRAQSDRLYLSAISIAEIEAGIARAIRIGASTKAPALRRWLAAVEHFYASRIL
PFGIEEARHAGAILDRARAHDPGFEDIAIAATAAAHGLTVMTANERHFAPLGVPYVNPLKELPA

Sequences:

>Translated_144_residues
MYLLDTNILSAFAPTRRDADAEALAAWMRAQSDRLYLSAISIAEIEAGIARAIRIGASTKAPALRRWLAAVEHFYASRIL
PFGIEEARHAGAILDRARAHDPGFEDIAIAATAAAHGLTVMTANERHFAPLGVPYVNPLKELPA
>Mature_144_residues
MYLLDTNILSAFAPTRRDADAEALAAWMRAQSDRLYLSAISIAEIEAGIARAIRIGASTKAPALRRWLAAVEHFYASRIL
PFGIEEARHAGAILDRARAHDPGFEDIAIAATAAAHGLTVMTANERHFAPLGVPYVNPLKELPA

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15573; Mature: 15573

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLLDTNILSAFAPTRRDADAEALAAWMRAQSDRLYLSAISIAEIEAGIARAIRIGASTK
CEEECCHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC
APALRRWLAAVEHFYASRILPFGIEEARHAGAILDRARAHDPGFEDIAIAATAAAHGLTV
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEE
MTANERHFAPLGVPYVNPLKELPA
EECCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MYLLDTNILSAFAPTRRDADAEALAAWMRAQSDRLYLSAISIAEIEAGIARAIRIGASTK
CEEECCHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC
APALRRWLAAVEHFYASRILPFGIEEARHAGAILDRARAHDPGFEDIAIAATAAAHGLTV
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEE
MTANERHFAPLGVPYVNPLKELPA
EECCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA