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The map label for this gene is 119386091

Identifier: 119386091

GI number: 119386091

Start: 523854

End: 525593

Strand: Direct

Name: 119386091

Synonym: Pden_3377

Alternate gene names: NA

Gene position: 523854-525593 (Clockwise)

Preceding gene: 119386090

Following gene: 119386092

Centisome position: 30.28

GC content: 70.0

Gene sequence:

>1740_bases
ATGAGCAACGAGGACGATTTCCGCATTCGCTCGGGGCGCATCCGCTCCAGCCGCAGCCAGCGTGCCCGGCCTTTCGTGGC
CCAGGCGCTGGCCGCCGCCCAGAAGGCCGGCGGGCGCGTCTCGCGCAGCGGCAGGATCGTGTCGCCGGGTGCCTCGCGCT
TCGGCCGGGGCCGAACTGCTGCCGTCCGCGCCAACAGGCTGATCACCCGCCGCACCCGGCTCTGCACCGTCAAGGTCCGG
GTGGTGCGCAGAATCGGGCAGGCCGCCGCGCTGCCCCGGCATCTGGGCTATCTCGGCCGCGACGGCGTCGCCCGCGACGG
AGAAAAGGCCCACATGTTCGATCCGAGCAGCGACGATGCGGACATCAGGGAATTCGCCGAGCGCAGCGAGGACGACCGCC
ATCATTTCCGCTTCATCGTCTCGCCCGAGGATGCCGCCGACATGGCGGACCTGAAACAGTTCGCCCGGGACCTCATGGCG
CAGGCGGAAAAGGATCTCGGCACCGAACTGGACTGGATCGCCGTCGATCACTGGAACACTGACAATCCCCATGTCCATGT
CATCCTGCGGGGGCGGGCGGATGACGGCAAGGACCTGGTCATCTCCCGCGACTACATCCGGGAAGGCTTGCGCGACCGGG
CGCAGGACCTGATCACCCGGGAACTGGGGCCGCGCCATGACCACGAGATCCGCCGCAGCCTGATGCGGCAGGTCGAGGCG
GAACGCTGGACCGCGCTCGACCGCCAGCTGGTCCGCGACGCCGGCAAGTCCGGCGTCATCGACATGGCGCCGGGCATCGA
CGGTCCGCGCGACGATTTCCTGCCGCAGAAGGTCGGCCGGCTGCGGCATCTGGAACGCCTCGGCCTGGCCGATCGGGTCG
GGCAGGCGCAATGGGTGATCCGGCGCGAGGCCGAGACCGTGCTGCGCGATCTCGGCGAGCGCGGCGACATCATCAAGCGC
ATCCATCGGGCGCTGTCGGGGCAGGGGATCGATCGCGGGGTTTCGGACTACGTCTTCGCCAGCGAGAAGGCCGATGGTCC
GATCCTCGGCCGGCTGGTCGAGCGCGGCCATGACGACGAGTTGAAGGGGACCGCCTATGCGGTGATCGACGGTGTCGATG
GCCGCACCCATCATATCCGGCTGCCGCATTTCGACGCCGCGGGCGACAGCGCGCCCGGCTCCATCGTCGAGCTGCGGTCC
TACGAGGATGCGAAGGGCGTGCGCCGCACCGCCCTGGCTGTCCGCTCCGATCTGGATATCCGCGCCCAGGTGACCGCGAG
CGGCGCCACATGGCTTGATCGCCAGGCGGTCTCTCGCGATCCCGCGGTGCTGTCGGAGGCCGGTTTCGGCGCCGAGGTGC
GCCAGACGATGCAGCGGCGCACGGAACATCTGATCGGGGAGGGTCTGGCCGAACGGCAGGGCAGCCGCATCGTCTTCGCC
CGCCGGCTGCTCGACCGGCTGCGCGAGCGTGAGATCGGCGCGCTGGCCGAGAAGCTTGCCGCCGAGACCGGCCTGTCGTT
CGAGCGCGCGGCCAGGGGCGACACCATTGCGGGCACCTATCGCCGGCGCTTCGCCCTGGCCTCGGGTCGCTTCGCCATGA
TCGACGACGGGCTGGGTTTCAAGCTGGTGCCCTGGACGCCCTCGCTCGAACGCCATCTGGGCCAACACGTCTCCGGGGTC
GTGCGCGGCGATGGCGGCGTGGATTGGAGCTTCGGCCGCAAGCGCGGGCTGGGGTTGTAG

Upstream 100 bases:

>100_bases
TCGAGGCATTTGCGCACCTCGCGGCGCCAAACCGCACCTCGCGGCTTCGCAGATTATGCAGGTTTTTGAACGAATCCCGC
ACCTCGCAGGAGATCGGCCG

Downstream 100 bases:

>100_bases
AGCCGATCACCTTGACGATCAGCGGGACCATCCCATATGACTACAGATAGTCATCGTGAGGATCAGCCATGAAGGAACTC
CAGCTCAGGGATGCGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MSNEDDFRIRSGRIRSSRSQRARPFVAQALAAAQKAGGRVSRSGRIVSPGASRFGRGRTAAVRANRLITRRTRLCTVKVR
VVRRIGQAAALPRHLGYLGRDGVARDGEKAHMFDPSSDDADIREFAERSEDDRHHFRFIVSPEDAADMADLKQFARDLMA
QAEKDLGTELDWIAVDHWNTDNPHVHVILRGRADDGKDLVISRDYIREGLRDRAQDLITRELGPRHDHEIRRSLMRQVEA
ERWTALDRQLVRDAGKSGVIDMAPGIDGPRDDFLPQKVGRLRHLERLGLADRVGQAQWVIRREAETVLRDLGERGDIIKR
IHRALSGQGIDRGVSDYVFASEKADGPILGRLVERGHDDELKGTAYAVIDGVDGRTHHIRLPHFDAAGDSAPGSIVELRS
YEDAKGVRRTALAVRSDLDIRAQVTASGATWLDRQAVSRDPAVLSEAGFGAEVRQTMQRRTEHLIGEGLAERQGSRIVFA
RRLLDRLREREIGALAEKLAAETGLSFERAARGDTIAGTYRRRFALASGRFAMIDDGLGFKLVPWTPSLERHLGQHVSGV
VRGDGGVDWSFGRKRGLGL

Sequences:

>Translated_579_residues
MSNEDDFRIRSGRIRSSRSQRARPFVAQALAAAQKAGGRVSRSGRIVSPGASRFGRGRTAAVRANRLITRRTRLCTVKVR
VVRRIGQAAALPRHLGYLGRDGVARDGEKAHMFDPSSDDADIREFAERSEDDRHHFRFIVSPEDAADMADLKQFARDLMA
QAEKDLGTELDWIAVDHWNTDNPHVHVILRGRADDGKDLVISRDYIREGLRDRAQDLITRELGPRHDHEIRRSLMRQVEA
ERWTALDRQLVRDAGKSGVIDMAPGIDGPRDDFLPQKVGRLRHLERLGLADRVGQAQWVIRREAETVLRDLGERGDIIKR
IHRALSGQGIDRGVSDYVFASEKADGPILGRLVERGHDDELKGTAYAVIDGVDGRTHHIRLPHFDAAGDSAPGSIVELRS
YEDAKGVRRTALAVRSDLDIRAQVTASGATWLDRQAVSRDPAVLSEAGFGAEVRQTMQRRTEHLIGEGLAERQGSRIVFA
RRLLDRLREREIGALAEKLAAETGLSFERAARGDTIAGTYRRRFALASGRFAMIDDGLGFKLVPWTPSLERHLGQHVSGV
VRGDGGVDWSFGRKRGLGL
>Mature_578_residues
SNEDDFRIRSGRIRSSRSQRARPFVAQALAAAQKAGGRVSRSGRIVSPGASRFGRGRTAAVRANRLITRRTRLCTVKVRV
VRRIGQAAALPRHLGYLGRDGVARDGEKAHMFDPSSDDADIREFAERSEDDRHHFRFIVSPEDAADMADLKQFARDLMAQ
AEKDLGTELDWIAVDHWNTDNPHVHVILRGRADDGKDLVISRDYIREGLRDRAQDLITRELGPRHDHEIRRSLMRQVEAE
RWTALDRQLVRDAGKSGVIDMAPGIDGPRDDFLPQKVGRLRHLERLGLADRVGQAQWVIRREAETVLRDLGERGDIIKRI
HRALSGQGIDRGVSDYVFASEKADGPILGRLVERGHDDELKGTAYAVIDGVDGRTHHIRLPHFDAAGDSAPGSIVELRSY
EDAKGVRRTALAVRSDLDIRAQVTASGATWLDRQAVSRDPAVLSEAGFGAEVRQTMQRRTEHLIGEGLAERQGSRIVFAR
RLLDRLREREIGALAEKLAAETGLSFERAARGDTIAGTYRRRFALASGRFAMIDDGLGFKLVPWTPSLERHLGQHVSGVV
RGDGGVDWSFGRKRGLGL

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64490; Mature: 64358

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEDDFRIRSGRIRSSRSQRARPFVAQALAAAQKAGGRVSRSGRIVSPGASRFGRGRTA
CCCCCCCEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCHH
AVRANRLITRRTRLCTVKVRVVRRIGQAAALPRHLGYLGRDGVARDGEKAHMFDPSSDDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
DIREFAERSEDDRHHFRFIVSPEDAADMADLKQFARDLMAQAEKDLGTELDWIAVDHWNT
HHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
DNPHVHVILRGRADDGKDLVISRDYIREGLRDRAQDLITRELGPRHDHEIRRSLMRQVEA
CCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ERWTALDRQLVRDAGKSGVIDMAPGIDGPRDDFLPQKVGRLRHLERLGLADRVGQAQWVI
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCHHHHHH
RREAETVLRDLGERGDIIKRIHRALSGQGIDRGVSDYVFASEKADGPILGRLVERGHDDE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHHCCCCCC
LKGTAYAVIDGVDGRTHHIRLPHFDAAGDSAPGSIVELRSYEDAKGVRRTALAVRSDLDI
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCE
RAQVTASGATWLDRQAVSRDPAVLSEAGFGAEVRQTMQRRTEHLIGEGLAERQGSRIVFA
EEEEEECCCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHH
RRLLDRLREREIGALAEKLAAETGLSFERAARGDTIAGTYRRRFALASGRFAMIDDGLGF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCE
KLVPWTPSLERHLGQHVSGVVRGDGGVDWSFGRKRGLGL
EEECCCCHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNEDDFRIRSGRIRSSRSQRARPFVAQALAAAQKAGGRVSRSGRIVSPGASRFGRGRTA
CCCCCCEEECCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCHH
AVRANRLITRRTRLCTVKVRVVRRIGQAAALPRHLGYLGRDGVARDGEKAHMFDPSSDDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
DIREFAERSEDDRHHFRFIVSPEDAADMADLKQFARDLMAQAEKDLGTELDWIAVDHWNT
HHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
DNPHVHVILRGRADDGKDLVISRDYIREGLRDRAQDLITRELGPRHDHEIRRSLMRQVEA
CCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ERWTALDRQLVRDAGKSGVIDMAPGIDGPRDDFLPQKVGRLRHLERLGLADRVGQAQWVI
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCHHHHHH
RREAETVLRDLGERGDIIKRIHRALSGQGIDRGVSDYVFASEKADGPILGRLVERGHDDE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHHCCCCCC
LKGTAYAVIDGVDGRTHHIRLPHFDAAGDSAPGSIVELRSYEDAKGVRRTALAVRSDLDI
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCE
RAQVTASGATWLDRQAVSRDPAVLSEAGFGAEVRQTMQRRTEHLIGEGLAERQGSRIVFA
EEEEEECCCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHH
RRLLDRLREREIGALAEKLAAETGLSFERAARGDTIAGTYRRRFALASGRFAMIDDGLGF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCE
KLVPWTPSLERHLGQHVSGVVRGDGGVDWSFGRKRGLGL
EEECCCCHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA