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The map label for this gene is 119386084

Identifier: 119386084

GI number: 119386084

Start: 518095

End: 518964

Strand: Direct

Name: 119386084

Synonym: Pden_3370

Alternate gene names: NA

Gene position: 518095-518964 (Clockwise)

Preceding gene: 119386083

Following gene: 119386085

Centisome position: 29.95

GC content: 67.36

Gene sequence:

>870_bases
GTGAGTTCCCCCATTTCCGCGCGCCGCATCTGCGGCGGCCGGCAGATGGAACTGTTCCGGCCGGTCGCCAGCGACATTGC
CGCCCGCGATTCCCGCGATCTGATGTCCTGGCCGTTCTTTTCGTTGGCCAAGTCCCGCCGCGTTGTGCCGATCGATTTCC
ACATGGGGCCGGTGTCGATCCGCGTGGAGGCGACGCCGGAACATGGCATGGCCACGATCTGGGATGCCGACATCCTGATC
TGGGCGGCCAGCCAGATCGTCGAGGCCCGCAACCAGGGCTTGCGGACCTCGCGTCTGATGGCCGCGACGCCCTACGAGAT
CCTCACCTTCATCCGGCGCGGCGATTCCGCCCGCAGCTACCTGCGGCTCAAGGCCGCCCTCGACCGCTTGCAATCGACGA
CGGTCGCCACCTCGATCCGCCAGCCGGCGGAACGGCGGCGGCACCGGTTTTCCTGGATCAACGAATGGAAGGAACTGCTC
GACGATCAACGCAGGCCGCTCGGGATCGAACTGATCCTGCCCGACTGGTTCTATGCCGGGGTGATGGACGATGCGCTGGT
CCTGACCATCGACCGCGCTTATTTCGACCTCAAGGGCGGGCTGGAGCGCTGGCTCTACCGTCTGGTGCGCCGCCACGGCG
GCCGCCAGCCCGGTGGCTGGAGTTTCGATCTCCGGCACCTGCACCTGAAATCCGGCAGCCTGTCGCCCTTTAAGCGCTTC
GCCTTCGAAGTCCGGGCCATCGTCCAAAGACAGCCGCTGCCCGGCTATCGCCTGTCGCTGGCCGTCGGTTCCGACGGGCT
GCCGCGGCTGTGTTTCCAACCAGCCCCCGCCAATCCCTTCGCCGCCGCGCCTCGCGCCGCGCGTCGGTGA

Upstream 100 bases:

>100_bases
GCGCCTGGATCGAAGGCTCGGCGCGGCAATCTACTTCGGAAATGGCAAAGATCGCCCGCAAGCCCGACCGGACGCTGGCC
GAAGCGAGGAGGGCAGGGCG

Downstream 100 bases:

>100_bases
ACGGCCAACCTGTGAACAAGCTGTGGACAGAGCCGTGCTATCAGGAACCGACCGACCCGTGCTATCCGGAACCCGACTCC
CGTGCTATCGGGAACCGAAA

Product: putative replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSSPISARRICGGRQMELFRPVASDIAARDSRDLMSWPFFSLAKSRRVVPIDFHMGPVSIRVEATPEHGMATIWDADILI
WAASQIVEARNQGLRTSRLMAATPYEILTFIRRGDSARSYLRLKAALDRLQSTTVATSIRQPAERRRHRFSWINEWKELL
DDQRRPLGIELILPDWFYAGVMDDALVLTIDRAYFDLKGGLERWLYRLVRRHGGRQPGGWSFDLRHLHLKSGSLSPFKRF
AFEVRAIVQRQPLPGYRLSLAVGSDGLPRLCFQPAPANPFAAAPRAARR

Sequences:

>Translated_289_residues
MSSPISARRICGGRQMELFRPVASDIAARDSRDLMSWPFFSLAKSRRVVPIDFHMGPVSIRVEATPEHGMATIWDADILI
WAASQIVEARNQGLRTSRLMAATPYEILTFIRRGDSARSYLRLKAALDRLQSTTVATSIRQPAERRRHRFSWINEWKELL
DDQRRPLGIELILPDWFYAGVMDDALVLTIDRAYFDLKGGLERWLYRLVRRHGGRQPGGWSFDLRHLHLKSGSLSPFKRF
AFEVRAIVQRQPLPGYRLSLAVGSDGLPRLCFQPAPANPFAAAPRAARR
>Mature_288_residues
SSPISARRICGGRQMELFRPVASDIAARDSRDLMSWPFFSLAKSRRVVPIDFHMGPVSIRVEATPEHGMATIWDADILIW
AASQIVEARNQGLRTSRLMAATPYEILTFIRRGDSARSYLRLKAALDRLQSTTVATSIRQPAERRRHRFSWINEWKELLD
DQRRPLGIELILPDWFYAGVMDDALVLTIDRAYFDLKGGLERWLYRLVRRHGGRQPGGWSFDLRHLHLKSGSLSPFKRFA
FEVRAIVQRQPLPGYRLSLAVGSDGLPRLCFQPAPANPFAAAPRAARR

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 32978; Mature: 32846

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPISARRICGGRQMELFRPVASDIAARDSRDLMSWPFFSLAKSRRVVPIDFHMGPVSI
CCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCEEEEEECCCCEEE
RVEATPEHGMATIWDADILIWAASQIVEARNQGLRTSRLMAATPYEILTFIRRGDSARSY
EEEECCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCHHHH
LRLKAALDRLQSTTVATSIRQPAERRRHRFSWINEWKELLDDQRRPLGIELILPDWFYAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
VMDDALVLTIDRAYFDLKGGLERWLYRLVRRHGGRQPGGWSFDLRHLHLKSGSLSPFKRF
HHCCEEEEEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHH
AFEVRAIVQRQPLPGYRLSLAVGSDGLPRLCFQPAPANPFAAAPRAARR
HHHHHHHHHCCCCCCEEEEEEECCCCCCHHEECCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SSPISARRICGGRQMELFRPVASDIAARDSRDLMSWPFFSLAKSRRVVPIDFHMGPVSI
CCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCEEEEEECCCCEEE
RVEATPEHGMATIWDADILIWAASQIVEARNQGLRTSRLMAATPYEILTFIRRGDSARSY
EEEECCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCHHHH
LRLKAALDRLQSTTVATSIRQPAERRRHRFSWINEWKELLDDQRRPLGIELILPDWFYAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
VMDDALVLTIDRAYFDLKGGLERWLYRLVRRHGGRQPGGWSFDLRHLHLKSGSLSPFKRF
HHCCEEEEEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHH
AFEVRAIVQRQPLPGYRLSLAVGSDGLPRLCFQPAPANPFAAAPRAARR
HHHHHHHHHCCCCCCEEEEEEECCCCCCHHEECCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]