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The map label for this gene is ywmD [H]

Identifier: 119386037

GI number: 119386037

Start: 480701

End: 483268

Strand: Direct

Name: ywmD [H]

Synonym: Pden_3320

Alternate gene names: 119386037

Gene position: 480701-483268 (Clockwise)

Preceding gene: 119386036

Following gene: 119386038

Centisome position: 27.78

GC content: 65.26

Gene sequence:

>2568_bases
ATGAGATCTCTTGTGACCGCCGGGCTTATCGCCCTGACATCCGCCCTTGCGCCGGCGGCGCTTGCCCAGGAGCGCCCCAG
CACGATCCTTGTTTTGGACGCCTCGGGGTCGATGTGGGGGCAGATCGATGGGATAAACAAAATCACCATCGCGCGCGATG
TCGTCGGGGACATTGTGTCGGATTTCCCCGCCGATCAGAATCTCGGTTTCGTCACCTATGGCCATCGCGAGCGCGGGCAA
TGCGCGGATATCGAAACCTTGGTCGAACCCGCGCCCGGCACTGCGGCAGAGATCGCCGGCATCGTTGAAGGGTTGAACCC
GCGGGGCATGACCCCGATGACCGATGCCGTCGTCACCGCGGCTCAGGCGTTGCGCCACACCGAACAGGCGGCGACGGTGA
TCCTGGTTTCCGATGGGATCGAGACCTGCAATCCTGATCCCTGCGCCGCCGCCCGCGCATTGGAAGAAGCGGGCGTAGAT
TTTACCGCCCATGTCATTGGCTTCGATGTGCGGGGCGAAGCCGACGCCCTGTTGCAGATGCAATGCATCGCCGAGGAAAC
CGGCGGCCGCTTCCTGACTGCCGACAATGCCCAGGAACTCAACGAGGCCTTGCGCGAGGTCACTGCCGCGCCTGCCTCAG
GGAGTTTCACCTTCACCGCAAATCTCGGAGGCGAGGAGATCGGCGACGAGACCGTCTGGGAGCGGCCAGCAGCGCCACCG
GAGCTTCCGCTTCTGTCCGGCGAGGTGATCTGGGAGATATCGGATACTTCGTTCAACATGGTGCAGACCGGCACCGCGAA
CCCCTTCACCACGGACCTTCCGTTCGGCGACTATATCGTGACGGTCCATTCGACGGCGCAGGACGACTTCTCGCAGACCG
AGGCCAGTTTGGCGTTGGACAGCGCGCGCAATGTCCACGCCATTTTCCCGCCCATCACGTCGCAACAGCCCGCCGCCCAG
GTATTCGGCCCGGCACAAACCTTGGTTGGCTCCGCGTTTACGGTGAGCTGGGAAGGTGAGGGTCTGGCTCCGCGTGATTA
TGTGACAATTGTCCCCGCCGACGCCGAAGACGGAGCCTATGCGGACTATGACCGGCTGGAGAACCGTACCGAAGGCGAGC
TTCGTGCACCTGCCGAGCCCGGTCTCTACGAAGTGCGTCTGCAATTGGACGCGGGGAACCGCGTGCTCGCCCGCACCCCG
GTCGAGGTGGTTGATGCCGACGTCACGGTCTCCGCACCCGCCCAGGTCGTTGTCGGGTCGGCATTCCCGGTCACCTGGCA
GGGCGAGGGCCTGCACCCGCGCGACTACGTGACAATCGTTCCCGCCGGTTCGGCGGACGGCACCTATGCCGACTACGATC
GCACGCAAGGTCGGAGCGAGGGCGAGCTGCGGGCGCCTGCCGAGCCTGGCCTCTACGAAGTGCGCCTGCAATTGGACGTG
GGGGACCGCGTGCTCGCCCGCACCCCGGTCGAGGTGGTCGATGCCGAGGTTGCTGTCTCCGCGCCGGCTCAGGTCGTTGT
CGGGTCGGCTTTCCCGGTCACCTGGCAGGGTGAGGGCCTGCACCCGCGCGACTACGTGACGATCGTTCCCGCCGGCTCGG
CGGACGGCACCTATGCCGATTACGATCGCATGCAAGGTCGGAGCGAGGGCGAGCTTCGCGCGCCTGCCGAGCCCGGCCTC
TACGAGGTGCGCCTGCAATTGGACGCGGGGGACCGCGTGCTCGCCCGCACCCCGGTCGAGGTGGTCGATGCAGAGGTCAC
GGTTTCCGCGTCGGCCCAGGTCGTTGTCGGTTCGGCGTTCCCGGTCACCTGGCAGGGTGAGGGCCTGCACCCGCGCGACT
ACGTCACGATCGTTCCCGCCGGCTCGGCGGACGGCACCTATGCCGACTACGATCGCATGCAAGATCGGAGCGAAGGCGAG
CTTCGCGCGCCTGCCGAGCCTGGCCTCTATGAGGTGCGCCTGCAATTGGACGCGGGGGATCGCGTGCTCGCCCGCACCCC
GGTCGAGGTGATGGATGGTAATGTTTCGCTTGACGGACCGGACAGGGCGCGGGCCGGCGCCGAGATCACGCTATCCTGGA
CCGGTGCCATACATCCGCGCGACTACATAGCCATCGTTCCCGGCGGCACACCGGACGGCGAGCAAAGTGGCTATCGCCGT
ATTCAGGACGAAGATCAGGCCACGTTCACTGCACCCGCGGAGCCTGGTGCCTATGAAATCCGCTACCATTTGGACCGCGG
CGATCGGGTCATGGCCCGGCGACCGCTCGAGGTGCTGGCGGCGGATGCGCCGATAGACGAGGGTGCCGGGCTTATGGTTC
CTGGTACAGCAAGGCCGGGCGATATCGTTACAGTTTCGTGGACAATCGAAGCTGGCGATGCCGACCGGCGCGTGGCGCTG
GCACGAGCTGATGCGCCCGACTTTACCTGGATTACAGTCGATCACGTGGGCGACGAAACCGAAACGGTAATCAAGCTCCC
GGACGAGCCGGGACAATACGAAGTGCGGTTTCTCGACCTTCAAAGCCAGAGCGTTCTCGGACGCGCGATGATCACGCTCG
GCGAATGA

Upstream 100 bases:

>100_bases
CTGAGTGGGATGCGCGGCTGGAGCAGATGTCCTCACATTTCCGCAAGCTGAAAGAGCGCGCCGATGCCCGCTTCGGGACA
GCGCGCGATGGAGAAGCCGC

Downstream 100 bases:

>100_bases
ACTACGACAATTTCAAAGAATCGGGAGCACTCACGACCATGCTCAGATCAGCCATCGCTGCATTTGGCTTTCTCGCCCTT
GTCGTACCCGTCATCGCTGC

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 855; Mature: 855

Protein sequence:

>855_residues
MRSLVTAGLIALTSALAPAALAQERPSTILVLDASGSMWGQIDGINKITIARDVVGDIVSDFPADQNLGFVTYGHRERGQ
CADIETLVEPAPGTAAEIAGIVEGLNPRGMTPMTDAVVTAAQALRHTEQAATVILVSDGIETCNPDPCAAARALEEAGVD
FTAHVIGFDVRGEADALLQMQCIAEETGGRFLTADNAQELNEALREVTAAPASGSFTFTANLGGEEIGDETVWERPAAPP
ELPLLSGEVIWEISDTSFNMVQTGTANPFTTDLPFGDYIVTVHSTAQDDFSQTEASLALDSARNVHAIFPPITSQQPAAQ
VFGPAQTLVGSAFTVSWEGEGLAPRDYVTIVPADAEDGAYADYDRLENRTEGELRAPAEPGLYEVRLQLDAGNRVLARTP
VEVVDADVTVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRTQGRSEGELRAPAEPGLYEVRLQLDV
GDRVLARTPVEVVDAEVAVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQGRSEGELRAPAEPGL
YEVRLQLDAGDRVLARTPVEVVDAEVTVSASAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQDRSEGE
LRAPAEPGLYEVRLQLDAGDRVLARTPVEVMDGNVSLDGPDRARAGAEITLSWTGAIHPRDYIAIVPGGTPDGEQSGYRR
IQDEDQATFTAPAEPGAYEIRYHLDRGDRVMARRPLEVLAADAPIDEGAGLMVPGTARPGDIVTVSWTIEAGDADRRVAL
ARADAPDFTWITVDHVGDETETVIKLPDEPGQYEVRFLDLQSQSVLGRAMITLGE

Sequences:

>Translated_855_residues
MRSLVTAGLIALTSALAPAALAQERPSTILVLDASGSMWGQIDGINKITIARDVVGDIVSDFPADQNLGFVTYGHRERGQ
CADIETLVEPAPGTAAEIAGIVEGLNPRGMTPMTDAVVTAAQALRHTEQAATVILVSDGIETCNPDPCAAARALEEAGVD
FTAHVIGFDVRGEADALLQMQCIAEETGGRFLTADNAQELNEALREVTAAPASGSFTFTANLGGEEIGDETVWERPAAPP
ELPLLSGEVIWEISDTSFNMVQTGTANPFTTDLPFGDYIVTVHSTAQDDFSQTEASLALDSARNVHAIFPPITSQQPAAQ
VFGPAQTLVGSAFTVSWEGEGLAPRDYVTIVPADAEDGAYADYDRLENRTEGELRAPAEPGLYEVRLQLDAGNRVLARTP
VEVVDADVTVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRTQGRSEGELRAPAEPGLYEVRLQLDV
GDRVLARTPVEVVDAEVAVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQGRSEGELRAPAEPGL
YEVRLQLDAGDRVLARTPVEVVDAEVTVSASAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQDRSEGE
LRAPAEPGLYEVRLQLDAGDRVLARTPVEVMDGNVSLDGPDRARAGAEITLSWTGAIHPRDYIAIVPGGTPDGEQSGYRR
IQDEDQATFTAPAEPGAYEIRYHLDRGDRVMARRPLEVLAADAPIDEGAGLMVPGTARPGDIVTVSWTIEAGDADRRVAL
ARADAPDFTWITVDHVGDETETVIKLPDEPGQYEVRFLDLQSQSVLGRAMITLGE
>Mature_855_residues
MRSLVTAGLIALTSALAPAALAQERPSTILVLDASGSMWGQIDGINKITIARDVVGDIVSDFPADQNLGFVTYGHRERGQ
CADIETLVEPAPGTAAEIAGIVEGLNPRGMTPMTDAVVTAAQALRHTEQAATVILVSDGIETCNPDPCAAARALEEAGVD
FTAHVIGFDVRGEADALLQMQCIAEETGGRFLTADNAQELNEALREVTAAPASGSFTFTANLGGEEIGDETVWERPAAPP
ELPLLSGEVIWEISDTSFNMVQTGTANPFTTDLPFGDYIVTVHSTAQDDFSQTEASLALDSARNVHAIFPPITSQQPAAQ
VFGPAQTLVGSAFTVSWEGEGLAPRDYVTIVPADAEDGAYADYDRLENRTEGELRAPAEPGLYEVRLQLDAGNRVLARTP
VEVVDADVTVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRTQGRSEGELRAPAEPGLYEVRLQLDV
GDRVLARTPVEVVDAEVAVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQGRSEGELRAPAEPGL
YEVRLQLDAGDRVLARTPVEVVDAEVTVSASAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQDRSEGE
LRAPAEPGLYEVRLQLDAGDRVLARTPVEVMDGNVSLDGPDRARAGAEITLSWTGAIHPRDYIAIVPGGTPDGEQSGYRR
IQDEDQATFTAPAEPGAYEIRYHLDRGDRVMARRPLEVLAADAPIDEGAGLMVPGTARPGDIVTVSWTIEAGDADRRVAL
ARADAPDFTWITVDHVGDETETVIKLPDEPGQYEVRFLDLQSQSVLGRAMITLGE

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 91000; Mature: 91000

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLVTAGLIALTSALAPAALAQERPSTILVLDASGSMWGQIDGINKITIARDVVGDIVS
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCEEEEHHHHHHHHHH
DFPADQNLGFVTYGHRERGQCADIETLVEPAPGTAAEIAGIVEGLNPRGMTPMTDAVVTA
HCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
AQALRHTEQAATVILVSDGIETCNPDPCAAARALEEAGVDFTAHVIGFDVRGEADALLQM
HHHHHHHCHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHEEE
QCIAEETGGRFLTADNAQELNEALREVTAAPASGSFTFTANLGGEEIGDETVWERPAAPP
EEHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCC
ELPLLSGEVIWEISDTSFNMVQTGTANPFTTDLPFGDYIVTVHSTAQDDFSQTEASLALD
CCCEECCEEEEEECCCCEEEEECCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHH
SARNVHAIFPPITSQQPAAQVFGPAQTLVGSAFTVSWEGEGLAPRDYVTIVPADAEDGAY
CCCCEEEEECCCCCCCCHHHHCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCC
ADYDRLENRTEGELRAPAEPGLYEVRLQLDAGNRVLARTPVEVVDADVTVSAPAQVVVGS
CCHHHHCCCCCCCEECCCCCCEEEEEEEECCCCEEEEECCHHHEECCEEECCCCEEEECC
AFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRTQGRSEGELRAPAEPGLYEVRLQLDV
CCEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCEECCCCCCEEEEEEEEEC
GDRVLARTPVEVVDAEVAVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYAD
CCEEECCCCHHHCCCEEEECCCCEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC
YDRMQGRSEGELRAPAEPGLYEVRLQLDAGDRVLARTPVEVVDAEVTVSASAQVVVGSAF
HHHHCCCCCCCEECCCCCCEEEEEEEECCCCEEEEECCHHHEEEEEEEECCCEEEEECCC
PVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQDRSEGELRAPAEPGLYEVRLQLDAGD
EEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCEECCCCCCEEEEEEEECCCC
RVLARTPVEVMDGNVSLDGPDRARAGAEITLSWTGAIHPRDYIAIVPGGTPDGEQSGYRR
EEEEECCHHHCCCCEEECCCHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
IQDEDQATFTAPAEPGAYEIRYHLDRGDRVMARRPLEVLAADAPIDEGAGLMVPGTARPG
CCCCCCEEEECCCCCCEEEEEEEECCCCEEECCCCHHHEEECCCCCCCCCEEECCCCCCC
DIVTVSWTIEAGDADRRVALARADAPDFTWITVDHVGDETETVIKLPDEPGQYEVRFLDL
CEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEE
QSQSVLGRAMITLGE
CCCHHHCEEEEEECC
>Mature Secondary Structure
MRSLVTAGLIALTSALAPAALAQERPSTILVLDASGSMWGQIDGINKITIARDVVGDIVS
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCEEEEHHHHHHHHHH
DFPADQNLGFVTYGHRERGQCADIETLVEPAPGTAAEIAGIVEGLNPRGMTPMTDAVVTA
HCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
AQALRHTEQAATVILVSDGIETCNPDPCAAARALEEAGVDFTAHVIGFDVRGEADALLQM
HHHHHHHCHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHEEE
QCIAEETGGRFLTADNAQELNEALREVTAAPASGSFTFTANLGGEEIGDETVWERPAAPP
EEHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCC
ELPLLSGEVIWEISDTSFNMVQTGTANPFTTDLPFGDYIVTVHSTAQDDFSQTEASLALD
CCCEECCEEEEEECCCCEEEEECCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHH
SARNVHAIFPPITSQQPAAQVFGPAQTLVGSAFTVSWEGEGLAPRDYVTIVPADAEDGAY
CCCCEEEEECCCCCCCCHHHHCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCC
ADYDRLENRTEGELRAPAEPGLYEVRLQLDAGNRVLARTPVEVVDADVTVSAPAQVVVGS
CCHHHHCCCCCCCEECCCCCCEEEEEEEECCCCEEEEECCHHHEECCEEECCCCEEEECC
AFPVTWQGEGLHPRDYVTIVPAGSADGTYADYDRTQGRSEGELRAPAEPGLYEVRLQLDV
CCEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCEECCCCCCEEEEEEEEEC
GDRVLARTPVEVVDAEVAVSAPAQVVVGSAFPVTWQGEGLHPRDYVTIVPAGSADGTYAD
CCEEECCCCHHHCCCEEEECCCCEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC
YDRMQGRSEGELRAPAEPGLYEVRLQLDAGDRVLARTPVEVVDAEVTVSASAQVVVGSAF
HHHHCCCCCCCEECCCCCCEEEEEEEECCCCEEEEECCHHHEEEEEEEECCCEEEEECCC
PVTWQGEGLHPRDYVTIVPAGSADGTYADYDRMQDRSEGELRAPAEPGLYEVRLQLDAGD
EEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCEECCCCCCEEEEEEEECCCC
RVLARTPVEVMDGNVSLDGPDRARAGAEITLSWTGAIHPRDYIAIVPGGTPDGEQSGYRR
EEEEECCHHHCCCCEEECCCHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
IQDEDQATFTAPAEPGAYEIRYHLDRGDRVMARRPLEVLAADAPIDEGAGLMVPGTARPG
CCCCCCEEEECCCCCCEEEEEEEECCCCEEECCCCHHHEEECCCCCCCCCEEECCCCCCC
DIVTVSWTIEAGDADRRVALARADAPDFTWITVDHVGDETETVIKLPDEPGQYEVRFLDL
CEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEE
QSQSVLGRAMITLGE
CCCHHHCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]