| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385993
Identifier: 119385993
GI number: 119385993
Start: 440299
End: 441330
Strand: Direct
Name: 119385993
Synonym: Pden_3274
Alternate gene names: NA
Gene position: 440299-441330 (Clockwise)
Preceding gene: 119385990
Following gene: 119385994
Centisome position: 25.45
GC content: 62.21
Gene sequence:
>1032_bases ATGATTATCGACTGCCACGGTCATTTCACCACCGTCCCGGGTTATTTCCGCGACTATCGCAATGCCCAGATCGCCGATTT CAAGGCCGGCAAGACCTCGGATTTCTCGCCCGCCCCGCAAATCTCGGATGAGGAACTGTGCGAAGGGCTGGAGAAGAACC AGATCCGCCTGCAGAAGGAACGCGGGATCGACATGACGCTGTTTTCGCCCATCGCCGGGCTGATGGGACATCACCACGGC AATGAGGCGCTGAGCAGGCATTGGTCGCGCACCTGCAACGACCTGATCCATCGGGTCAGCACCCTTTACCCGGACCGGTT TGTTCCCATCTGCCAGCTGCCGCAGAGCCCGGGCGCAGACCCGCGCGGCTGCATCGAGGAACTGGAGCGTTGCGTCCTCG AGCTGGGCTTTGTCGGCTGCAACCTCAATCCCGATCCGACCGACGGCTACTGGACCGACCCGCCGGTGACGGACAAATGG TGGTATCCGCTTTACGAGAAGCTGGTCGAGCTGGACGTGCCGGCCATGATTCACGTCTCGGGCTCGTGCAACCCGAACTT CCACGGAACGGGGGCGCATTATCTGAACGGCGACACCTCGGTCTTCATGCAGCTTCTGCTGTCGGATCTGTTCAAGGATT TTCCGACCTTGCGGATGGTAATCCCGCATGGCGGCGGTGCGGTGCCTTACCATTGGGGCCGCTATCGCGGCCTTGCGAAT GACCTTGGCCGGCCGCCGCTGGCCGAAGCGCTGATGAACAACGTCTTCTTCGACACCTGCGTCTATCACCAGCCAGGCAT TGATCTGCTGACCGAGGTGATCCCGGTCCGGAACGTACTCTTCGGTTCGGAAATGGTGGGCGCGGTGCGCTCGATCGACC CCGAGACCGGCCATGCCTTCGACGACACCCGCCGCTATGTCGAGGCGCTGGAGCTTTCGCCCGAGGACCGGCACGCGATC TTCGAAGGCAATGTGCGCCGCGTCTATCCGCGCCTCGACGCGCGGCTGAAGGCGATGGGAAAAGCGGCATGA
Upstream 100 bases:
>100_bases CGGCACGAATTCCAATTGGCACCCTGAAGCCCGCCTAGGCTAGGCAGTTGGCAGGGAACGATGACGTTCCACGAACTTCC CTTTCAGAGGTGCTGCCGAC
Downstream 100 bases:
>100_bases AGGGGCCGCGCACTGCCGCCCGCATCCTCGTCGACCAGCTGTTGCTGCAAGGTGTGGACCGCGTCTTCTGCGTGCCGGGC GAAAGCTTCCTCGCCGTTCT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Aminocarboxymuconate-Semialdehyde Decarboxylase; FLDW Protein; LOW QUALITY PROTEIN 4-Oxalomesaconate Hydratase; Amidohydrolase Family
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKERGIDMTLFSPIAGLMGHHHG NEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGADPRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKW WYPLYEKLVELDVPAMIHVSGSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAFDDTRRYVEALELSPEDRHAI FEGNVRRVYPRLDARLKAMGKAA
Sequences:
>Translated_343_residues MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKERGIDMTLFSPIAGLMGHHHG NEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGADPRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKW WYPLYEKLVELDVPAMIHVSGSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAFDDTRRYVEALELSPEDRHAI FEGNVRRVYPRLDARLKAMGKAA >Mature_343_residues MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKERGIDMTLFSPIAGLMGHHHG NEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGADPRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKW WYPLYEKLVELDVPAMIHVSGSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAFDDTRRYVEALELSPEDRHAI FEGNVRRVYPRLDARLKAMGKAA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38578; Mature: 38578
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKE CEEECCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH RGIDMTLFSPIAGLMGHHHGNEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGAD CCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC PRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKWWYPLYEKLVELDVPAMIHVS HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC GSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCHHH DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAF HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH DDTRRYVEALELSPEDRHAIFEGNVRRVYPRLDARLKAMGKAA HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIIDCHGHFTTVPGYFRDYRNAQIADFKAGKTSDFSPAPQISDEELCEGLEKNQIRLQKE CEEECCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH RGIDMTLFSPIAGLMGHHHGNEALSRHWSRTCNDLIHRVSTLYPDRFVPICQLPQSPGAD CCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC PRGCIEELERCVLELGFVGCNLNPDPTDGYWTDPPVTDKWWYPLYEKLVELDVPAMIHVS HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC GSCNPNFHGTGAHYLNGDTSVFMQLLLSDLFKDFPTLRMVIPHGGGAVPYHWGRYRGLAN CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCHHH DLGRPPLAEALMNNVFFDTCVYHQPGIDLLTEVIPVRNVLFGSEMVGAVRSIDPETGHAF HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH DDTRRYVEALELSPEDRHAIFEGNVRRVYPRLDARLKAMGKAA HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA