Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385987

Identifier: 119385987

GI number: 119385987

Start: 432650

End: 434680

Strand: Direct

Name: 119385987

Synonym: Pden_3268

Alternate gene names: NA

Gene position: 432650-434680 (Clockwise)

Preceding gene: 119385986

Following gene: 119385988

Centisome position: 25.01

GC content: 63.61

Gene sequence:

>2031_bases
ATGGAATTTCTTCAAGACTCCGTGATTCTCTCCGCCGCGGGCGATGCGCTCGGCCTCATTCTGCAGCCAGAGCGCATCAT
GTTCCTGTGGCTTGGCGTGATCGTGGGACTGGCGATCGGGCTGCTGCCCGGCGTGGGCGGGCTGACGGGCTTTGCGATCC
TGGTGCCCTTTACCTACACGATGGACCCTTATTCGGCGTTTGCCATGCTGCTTGGGATGGCGGCGGTCACGACAACCTCG
GACACCATTCCCGCGGTGCTCTTTGGTGCCGCCGCGCAAGCGACAGTGCTTGACGGCCTGCCCATGACCAAGCGGGGCGA
AGCCGGGCGCGCGCTCAGCGCAAGCTACCTCGCCAACATGATGGGCGGCTTGATAGGCGCGATTATCCTGGCGGTTTCGC
TGCCCGTGGTGCGCCCCTTCGTGCTGGCCATAGCCACCCCCGAACTGTTGGCGATGACCATTCTGGGGATCGCGATGGTA
GCGACGCTCTCTGGAAAATCGCCGCTGAAGGGCTTGGTCGTCGCCTGCTTCGGCATTCTGGTCGGGATGGTCGGCACCGA
TACGCAGACGGGTCAGATGCGCTGGACGGGCGGGCTGCTATATCTGCAAGACGGCCTGCCGATGCTGCCGATCCTGCTGG
GCCTTTTTGCGCTGCCCGAGCTTTGCGATCTTGCCATCCAGCGGACCTCCATCGCCCAGGACATGAAGTTCAGCCCGCGT
CAGGGCATGCTTCAGGGCATCAAGGATGTCGCGCGGAACTGGTTTCTCGTCCTGCGCTGCAGCAGCCTCGGCGCGGTCCT
GGGCGCGATTCCCGGCATGACCGGCTCGGTCGTGGACTGGATCGCCTATGGCCATGCGCTCCAGACCGAAAAGGGCGCGA
AAGAGAGCTTTACCAAGGGGGACGTGCGGGGCGTCATCGCGCCGGAATCGGCCAACAACGCCCGCGACGGCGGCAGTCTT
GTGCCGATGCTGGCTTTTGGCGTGCCGGGCGGTGCAGCGCAGGCGATCCTGCTCGGGGCGCTGATGGTGCACGGTTTCAC
GCCAGGCCCTGACATGCTGACGAAGAATCTGGATCTGACCTATTCGATGGTGTGGTCCATTGCGCTTGCCAACATCTTCG
GGGCCGGCACCTGCTTCCTGCTCAGCGGTCAGTTCGCCAGGATCTCGACCCTGCGCTACACATTGGTCCTGCCGATCATC
ATGTCCATCGTCTATGTCGGCGCCTTCCAGGGCTCGCGGAGCTGGGGTGACATGTATGTGCTGCTGATCTTCGGCCTGAT
CGGATGGAGCATGAAGCGGCTGAGATGGCCTCGTCCGCCCCTGATCCTGGGGCTCGTTCTGGGCGCGTTGATCGAGCGGT
ACATGTCGATCTCGTTCCTTCGCTACGGTATGGACTGGGCGCTGCGTCCGGGGGTCATGGTGCTTTTGGCTTGCGCGGCC
CTCATCATGTTCAGCCCGGTACTGCGGCTGCTTCGCAAGGAGAACCGGGCGGGCGTCGTGCTTCGTCGCCGTCCCTATCT
GGGGCTCGACGATCTGGCCTATGGGCTTTTCATCGCGATCGGCGTCTACGTGCTCGTCACCTCGCGGGACTGGCTCTTCA
ACGCGCGGATCGGGCCTGTGGTCGTTGCCTCGACGATGGTCATCGCTGGCGGGCTGAGCCTGATTCACAAGACCTTCTTC
AAGGAGGTCCGGGCGGCCGCAACGAACGGCGTTCACATGGACATCGGCGGCGACCCCGAGGAGGAGCTGCCCAGGCGGCT
GGTGCTCGTCAGGGCGGCGCGGTTCTACGGTTGGTTCGTGCTGTTTCTGTTGTCGATGGCGGTGATCGGTCTGCTTCCGA
CCGTGCCGCTGGTCATCATGGCCTTCATGCGGATCGAGGGGCGGGAACCCTGGCGTCTCAGCGCGATCCTCGCGGCATCG
GTGACACTGCTTCTCTATATCGTGTTCCACCGGATCATTCACGTGCCCTGGCCCACCAGCCTTATGGGAGACTGGTTCCC
GATCCTGCGGGAGGTGGTTCCCTCGATGTAG

Upstream 100 bases:

>100_bases
TATGCTGGCCAACCAAGGCACAGCGCGGCCCTGCACTTCCGAAGACCGGAGGGCGGCGCAATGACAGGCGGCGATCAGGC
CGTGAAGGCAGGGCTGTAGC

Downstream 100 bases:

>100_bases
GCCCGCTCCAGAGAAAATCACGGGAAATGCCAATGGCGGGCTTACGGGTCCGCCATCATGTTTTGGTCCGGTTCAAACTT
CTATCGCCCGGGCAACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MEFLQDSVILSAAGDALGLILQPERIMFLWLGVIVGLAIGLLPGVGGLTGFAILVPFTYTMDPYSAFAMLLGMAAVTTTS
DTIPAVLFGAAAQATVLDGLPMTKRGEAGRALSASYLANMMGGLIGAIILAVSLPVVRPFVLAIATPELLAMTILGIAMV
ATLSGKSPLKGLVVACFGILVGMVGTDTQTGQMRWTGGLLYLQDGLPMLPILLGLFALPELCDLAIQRTSIAQDMKFSPR
QGMLQGIKDVARNWFLVLRCSSLGAVLGAIPGMTGSVVDWIAYGHALQTEKGAKESFTKGDVRGVIAPESANNARDGGSL
VPMLAFGVPGGAAQAILLGALMVHGFTPGPDMLTKNLDLTYSMVWSIALANIFGAGTCFLLSGQFARISTLRYTLVLPII
MSIVYVGAFQGSRSWGDMYVLLIFGLIGWSMKRLRWPRPPLILGLVLGALIERYMSISFLRYGMDWALRPGVMVLLACAA
LIMFSPVLRLLRKENRAGVVLRRRPYLGLDDLAYGLFIAIGVYVLVTSRDWLFNARIGPVVVASTMVIAGGLSLIHKTFF
KEVRAAATNGVHMDIGGDPEEELPRRLVLVRAARFYGWFVLFLLSMAVIGLLPTVPLVIMAFMRIEGREPWRLSAILAAS
VTLLLYIVFHRIIHVPWPTSLMGDWFPILREVVPSM

Sequences:

>Translated_676_residues
MEFLQDSVILSAAGDALGLILQPERIMFLWLGVIVGLAIGLLPGVGGLTGFAILVPFTYTMDPYSAFAMLLGMAAVTTTS
DTIPAVLFGAAAQATVLDGLPMTKRGEAGRALSASYLANMMGGLIGAIILAVSLPVVRPFVLAIATPELLAMTILGIAMV
ATLSGKSPLKGLVVACFGILVGMVGTDTQTGQMRWTGGLLYLQDGLPMLPILLGLFALPELCDLAIQRTSIAQDMKFSPR
QGMLQGIKDVARNWFLVLRCSSLGAVLGAIPGMTGSVVDWIAYGHALQTEKGAKESFTKGDVRGVIAPESANNARDGGSL
VPMLAFGVPGGAAQAILLGALMVHGFTPGPDMLTKNLDLTYSMVWSIALANIFGAGTCFLLSGQFARISTLRYTLVLPII
MSIVYVGAFQGSRSWGDMYVLLIFGLIGWSMKRLRWPRPPLILGLVLGALIERYMSISFLRYGMDWALRPGVMVLLACAA
LIMFSPVLRLLRKENRAGVVLRRRPYLGLDDLAYGLFIAIGVYVLVTSRDWLFNARIGPVVVASTMVIAGGLSLIHKTFF
KEVRAAATNGVHMDIGGDPEEELPRRLVLVRAARFYGWFVLFLLSMAVIGLLPTVPLVIMAFMRIEGREPWRLSAILAAS
VTLLLYIVFHRIIHVPWPTSLMGDWFPILREVVPSM
>Mature_676_residues
MEFLQDSVILSAAGDALGLILQPERIMFLWLGVIVGLAIGLLPGVGGLTGFAILVPFTYTMDPYSAFAMLLGMAAVTTTS
DTIPAVLFGAAAQATVLDGLPMTKRGEAGRALSASYLANMMGGLIGAIILAVSLPVVRPFVLAIATPELLAMTILGIAMV
ATLSGKSPLKGLVVACFGILVGMVGTDTQTGQMRWTGGLLYLQDGLPMLPILLGLFALPELCDLAIQRTSIAQDMKFSPR
QGMLQGIKDVARNWFLVLRCSSLGAVLGAIPGMTGSVVDWIAYGHALQTEKGAKESFTKGDVRGVIAPESANNARDGGSL
VPMLAFGVPGGAAQAILLGALMVHGFTPGPDMLTKNLDLTYSMVWSIALANIFGAGTCFLLSGQFARISTLRYTLVLPII
MSIVYVGAFQGSRSWGDMYVLLIFGLIGWSMKRLRWPRPPLILGLVLGALIERYMSISFLRYGMDWALRPGVMVLLACAA
LIMFSPVLRLLRKENRAGVVLRRRPYLGLDDLAYGLFIAIGVYVLVTSRDWLFNARIGPVVVASTMVIAGGLSLIHKTFF
KEVRAAATNGVHMDIGGDPEEELPRRLVLVRAARFYGWFVLFLLSMAVIGLLPTVPLVIMAFMRIEGREPWRLSAILAAS
VTLLLYIVFHRIIHVPWPTSLMGDWFPILREVVPSM

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 72776; Mature: 72776

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLQDSVILSAAGDALGLILQPERIMFLWLGVIVGLAIGLLPGVGGLTGFAILVPFTYT
CCCHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
MDPYSAFAMLLGMAAVTTTSDTIPAVLFGAAAQATVLDGLPMTKRGEAGRALSASYLANM
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
MGGLIGAIILAVSLPVVRPFVLAIATPELLAMTILGIAMVATLSGKSPLKGLVVACFGIL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VGMVGTDTQTGQMRWTGGLLYLQDGLPMLPILLGLFALPELCDLAIQRTSIAQDMKFSPR
HHHCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QGMLQGIKDVARNWFLVLRCSSLGAVLGAIPGMTGSVVDWIAYGHALQTEKGAKESFTKG
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCHHCCCCC
DVRGVIAPESANNARDGGSLVPMLAFGVPGGAAQAILLGALMVHGFTPGPDMLTKNLDLT
CCCEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCHH
YSMVWSIALANIFGAGTCFLLSGQFARISTLRYTLVLPIIMSIVYVGAFQGSRSWGDMYV
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLIFGLIGWSMKRLRWPRPPLILGLVLGALIERYMSISFLRYGMDWALRPGVMVLLACAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHH
LIMFSPVLRLLRKENRAGVVLRRRPYLGLDDLAYGLFIAIGVYVLVTSRDWLFNARIGPV
HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEECCCCHH
VVASTMVIAGGLSLIHKTFFKEVRAAATNGVHMDIGGDPEEELPRRLVLVRAARFYGWFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LFLLSMAVIGLLPTVPLVIMAFMRIEGREPWRLSAILAASVTLLLYIVFHRIIHVPWPTS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LMGDWFPILREVVPSM
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFLQDSVILSAAGDALGLILQPERIMFLWLGVIVGLAIGLLPGVGGLTGFAILVPFTYT
CCCHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
MDPYSAFAMLLGMAAVTTTSDTIPAVLFGAAAQATVLDGLPMTKRGEAGRALSASYLANM
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
MGGLIGAIILAVSLPVVRPFVLAIATPELLAMTILGIAMVATLSGKSPLKGLVVACFGIL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VGMVGTDTQTGQMRWTGGLLYLQDGLPMLPILLGLFALPELCDLAIQRTSIAQDMKFSPR
HHHCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QGMLQGIKDVARNWFLVLRCSSLGAVLGAIPGMTGSVVDWIAYGHALQTEKGAKESFTKG
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCHHCCCCC
DVRGVIAPESANNARDGGSLVPMLAFGVPGGAAQAILLGALMVHGFTPGPDMLTKNLDLT
CCCEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCHH
YSMVWSIALANIFGAGTCFLLSGQFARISTLRYTLVLPIIMSIVYVGAFQGSRSWGDMYV
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLIFGLIGWSMKRLRWPRPPLILGLVLGALIERYMSISFLRYGMDWALRPGVMVLLACAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHH
LIMFSPVLRLLRKENRAGVVLRRRPYLGLDDLAYGLFIAIGVYVLVTSRDWLFNARIGPV
HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEECCCCHH
VVASTMVIAGGLSLIHKTFFKEVRAAATNGVHMDIGGDPEEELPRRLVLVRAARFYGWFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LFLLSMAVIGLLPTVPLVIMAFMRIEGREPWRLSAILAASVTLLLYIVFHRIIHVPWPTS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LMGDWFPILREVVPSM
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]