| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is 119385986
Identifier: 119385986
GI number: 119385986
Start: 431624
End: 432613
Strand: Direct
Name: 119385986
Synonym: Pden_3267
Alternate gene names: NA
Gene position: 431624-432613 (Clockwise)
Preceding gene: 119385985
Following gene: 119385987
Centisome position: 24.95
GC content: 62.53
Gene sequence:
>990_bases ATGGTTCTGAACGGCCTGGCATACCAAGACCGTCTGCGGGCGCCTGATGCGTCGCGCCATCCGTCCTGTTTCCAAGGTAA GACCGACATGACCTACGAAATCATCGACATTCATCCGCACATCATCTCGACCGATACCGGGAAATACCCCATCGCGCCGC AGGCCGGACATCGTTCGAAATGGTCGGCCTCGCGCCCGGCCGATTTTGACCAGTTGGTGGCGGCGATGGACGAGGCGGGG ATCGCCAAGGCCGCGATCGTTCATTCCTCCACGACCTACGGGCATGACAATTCCTATGTCGCGGATTCGGTGGCCTCGCA GCCGGATCGCTTCACCGGTGTATTCTCCTTCGACCTGCTGGCCCGGGACGCGCTGGCGACTTTCGATTATTGGCTGGGCC GGGGGATGGGGGGTATCCGGCTTTTCACCGGGGGCGCGACCCATCAGACCGACGGCAGCTGGCTCGTCGACCCGGCGACC TTTCCGGTCTGGGAACGCTGCGCCGAGAACGATCTGACCATGGTGATTCAGACGACACCTGCGGGGTTGGGGATGGTCGC GGACCTCGCCCACCGCTTTCCATCGGTCCGCATCGCTCTTGATCATTGCGCCCGCCCGGTCCTTGCAGGCGGCCCGCCCT ATGACGCCTGTGCAGAACTGTTCGAGCTTGCGCGTTTCGAGAATGTCTATCTGAAGATCACGCCGAAGACCTTCGATCTG GCGCAGGCTGCCCCCGGTGGGGCCGAGGCATTCTTCCCGCATCTGGTCGCGGTCTTCGGTGCGGACCACCTTGCCTTCGG CTCGAACTACCCGGCCTCTGCCGGTTCGCTGACTGAATTGATCGCTCAGGGAAATAAATGTTTCGAAAGCCTCGGCGATA AGGACCGGGCGTGGATCTGGGGGCGCACGGCAAAGGTTCTCTATCCTATGCTGGCCAACCAAGGCACAGCGCGGCCCTGC ACTTCCGAAGACCGGAGGGCGGCGCAATGA
Upstream 100 bases:
>100_bases TGGCCGAGATCGTCGCAACGCTGTTCGCTACGCCCGAGACGGAACTCGAGGCCGTACGCAAGATCCTGAAACCCTGAATC TGACGAAAACTGGCGCGGGC
Downstream 100 bases:
>100_bases CAGGCGGCGATCAGGCCGTGAAGGCAGGGCTGTAGCATGGAATTTCTTCAAGACTCCGTGATTCTCTCCGCCGCGGGCGA TGCGCTCGGCCTCATTCTGC
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSKWSASRPADFDQLVAAMDEAG IAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLLARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPAT FPVWERCAENDLTMVIQTTPAGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIWGRTAKVLYPMLANQGTARPC TSEDRRAAQ
Sequences:
>Translated_329_residues MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSKWSASRPADFDQLVAAMDEAG IAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLLARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPAT FPVWERCAENDLTMVIQTTPAGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIWGRTAKVLYPMLANQGTARPC TSEDRRAAQ >Mature_329_residues MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSKWSASRPADFDQLVAAMDEAG IAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLLARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPAT FPVWERCAENDLTMVIQTTPAGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIWGRTAKVLYPMLANQGTARPC TSEDRRAAQ
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35655; Mature: 35655
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSK CCCCCCCHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCC WSASRPADFDQLVAAMDEAGIAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLL CCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEHHHH ARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPATFPVWERCAENDLTMVIQTTP HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCCEEEEEEECC AGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL CCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHH AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIW HHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCEEEE GRTAKVLYPMLANQGTARPCTSEDRRAAQ CCHHHHHHHHHHCCCCCCCCCCCHHHCCC >Mature Secondary Structure MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSK CCCCCCCHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCC WSASRPADFDQLVAAMDEAGIAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLL CCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEHHHH ARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPATFPVWERCAENDLTMVIQTTP HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCCEEEEEEECC AGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL CCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHH AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIW HHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCEEEE GRTAKVLYPMLANQGTARPCTSEDRRAAQ CCHHHHHHHHHHCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA