Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385986

Identifier: 119385986

GI number: 119385986

Start: 431624

End: 432613

Strand: Direct

Name: 119385986

Synonym: Pden_3267

Alternate gene names: NA

Gene position: 431624-432613 (Clockwise)

Preceding gene: 119385985

Following gene: 119385987

Centisome position: 24.95

GC content: 62.53

Gene sequence:

>990_bases
ATGGTTCTGAACGGCCTGGCATACCAAGACCGTCTGCGGGCGCCTGATGCGTCGCGCCATCCGTCCTGTTTCCAAGGTAA
GACCGACATGACCTACGAAATCATCGACATTCATCCGCACATCATCTCGACCGATACCGGGAAATACCCCATCGCGCCGC
AGGCCGGACATCGTTCGAAATGGTCGGCCTCGCGCCCGGCCGATTTTGACCAGTTGGTGGCGGCGATGGACGAGGCGGGG
ATCGCCAAGGCCGCGATCGTTCATTCCTCCACGACCTACGGGCATGACAATTCCTATGTCGCGGATTCGGTGGCCTCGCA
GCCGGATCGCTTCACCGGTGTATTCTCCTTCGACCTGCTGGCCCGGGACGCGCTGGCGACTTTCGATTATTGGCTGGGCC
GGGGGATGGGGGGTATCCGGCTTTTCACCGGGGGCGCGACCCATCAGACCGACGGCAGCTGGCTCGTCGACCCGGCGACC
TTTCCGGTCTGGGAACGCTGCGCCGAGAACGATCTGACCATGGTGATTCAGACGACACCTGCGGGGTTGGGGATGGTCGC
GGACCTCGCCCACCGCTTTCCATCGGTCCGCATCGCTCTTGATCATTGCGCCCGCCCGGTCCTTGCAGGCGGCCCGCCCT
ATGACGCCTGTGCAGAACTGTTCGAGCTTGCGCGTTTCGAGAATGTCTATCTGAAGATCACGCCGAAGACCTTCGATCTG
GCGCAGGCTGCCCCCGGTGGGGCCGAGGCATTCTTCCCGCATCTGGTCGCGGTCTTCGGTGCGGACCACCTTGCCTTCGG
CTCGAACTACCCGGCCTCTGCCGGTTCGCTGACTGAATTGATCGCTCAGGGAAATAAATGTTTCGAAAGCCTCGGCGATA
AGGACCGGGCGTGGATCTGGGGGCGCACGGCAAAGGTTCTCTATCCTATGCTGGCCAACCAAGGCACAGCGCGGCCCTGC
ACTTCCGAAGACCGGAGGGCGGCGCAATGA

Upstream 100 bases:

>100_bases
TGGCCGAGATCGTCGCAACGCTGTTCGCTACGCCCGAGACGGAACTCGAGGCCGTACGCAAGATCCTGAAACCCTGAATC
TGACGAAAACTGGCGCGGGC

Downstream 100 bases:

>100_bases
CAGGCGGCGATCAGGCCGTGAAGGCAGGGCTGTAGCATGGAATTTCTTCAAGACTCCGTGATTCTCTCCGCCGCGGGCGA
TGCGCTCGGCCTCATTCTGC

Product: amidohydrolase 2

Products: NA

Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSKWSASRPADFDQLVAAMDEAG
IAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLLARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPAT
FPVWERCAENDLTMVIQTTPAGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL
AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIWGRTAKVLYPMLANQGTARPC
TSEDRRAAQ

Sequences:

>Translated_329_residues
MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSKWSASRPADFDQLVAAMDEAG
IAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLLARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPAT
FPVWERCAENDLTMVIQTTPAGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL
AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIWGRTAKVLYPMLANQGTARPC
TSEDRRAAQ
>Mature_329_residues
MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSKWSASRPADFDQLVAAMDEAG
IAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLLARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPAT
FPVWERCAENDLTMVIQTTPAGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL
AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIWGRTAKVLYPMLANQGTARPC
TSEDRRAAQ

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35655; Mature: 35655

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSK
CCCCCCCHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCC
WSASRPADFDQLVAAMDEAGIAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLL
CCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEHHHH
ARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPATFPVWERCAENDLTMVIQTTP
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCCEEEEEEECC
AGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL
CCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHH
AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIW
HHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCEEEE
GRTAKVLYPMLANQGTARPCTSEDRRAAQ
CCHHHHHHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MVLNGLAYQDRLRAPDASRHPSCFQGKTDMTYEIIDIHPHIISTDTGKYPIAPQAGHRSK
CCCCCCCHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCC
WSASRPADFDQLVAAMDEAGIAKAAIVHSSTTYGHDNSYVADSVASQPDRFTGVFSFDLL
CCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEHHHH
ARDALATFDYWLGRGMGGIRLFTGGATHQTDGSWLVDPATFPVWERCAENDLTMVIQTTP
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCHHHHHHCCCCEEEEEEECC
AGLGMVADLAHRFPSVRIALDHCARPVLAGGPPYDACAELFELARFENVYLKITPKTFDL
CCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHH
AQAAPGGAEAFFPHLVAVFGADHLAFGSNYPASAGSLTELIAQGNKCFESLGDKDRAWIW
HHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCEEEE
GRTAKVLYPMLANQGTARPCTSEDRRAAQ
CCHHHHHHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA