Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385957

Identifier: 119385957

GI number: 119385957

Start: 401247

End: 402308

Strand: Direct

Name: 119385957

Synonym: Pden_3235

Alternate gene names: NA

Gene position: 401247-402308 (Clockwise)

Preceding gene: 119385953

Following gene: 119385958

Centisome position: 23.19

GC content: 64.97

Gene sequence:

>1062_bases
ATGAACTTTCTGGGGGCATGTATGGTCTCGACCGGTATTCTCGCGGCTGCCAGTGCCTCGGCGCAGCAGGCCGAGCCGCT
TGTGATCAGCGAGCAAGGCAGCTTCTTCGCGGGCGGCTCGGTCGTCACCACGCCAGGCACCTACAACAACAATGTGCCGA
CCGCCGAGGGGCAGAGCATCCACGGCGATCACCTCTACACCTTCTACCAGATTCCGCAGGATGCGAAGTCCACGCCTATC
GTGATGCTGCATGGCCACATGCAATCGGCGCGCAGTTGGGAGACGACGCCGGACGGGCGCGAGGGCTTCCAGACCCTGTT
CCTGCGCAAGGGCTATCCGGTCTATCTGGTCGATCAGCCGCGCCGGGGCCGGGCCGGCAACAGCCTTGAGGCCGCGACCA
TCGAGCCGACACCGCTCGATCAGTTGTTCTTCGACCAGTTTCGCCTGGGCATTTGGCCCGATTATTTCGAGGGCGTCCAG
GTCGACCAGAGCCCGGAGACGCTGGAGCAGTTCCTGCGCTGGATCACCCCGAACACCGGCCCCTATGATCCGAATGTAGT
CGCGGATGCGATGTCGGCGCTGGTCGACAGGACCGGCCCGGCGATCCTGTTCACCCATTCGCAGGGCGGCGGCCCCGGCT
GGCTGACGGCGATCAGGAACGAGGACATTCGAGCAATCGTCTCCTACGAGCCGGGCAGCGGCTTCGTCTTCCCCGAAGGG
GAGGTGCCGGAGACCATGCCGAGCGCGGGCGGGCCGCTGGCGGCGGAAGCCGTGCCGCTGGAGGATTTCCAGAAGCTGAC
CCGCTTCCCGATCCTGATCTACTATGGCGACAACTTCCCCACCGAGCCGACCGAGCGCCGCGGCGAGGACATCTGGCGCG
TGCGGCTGGACATGGCGAAGCTGTGGGTCGAGGCGGTCAACCGTCATGGCGGCGACGTCACGCTGGTTCACCTGCCCGAG
ATCGGCATCACCGGGAACACGCATTTCCCGTTCTCGGACCTGAACAACGTCGAGATCGCCGATCACACCGCGCAGTTCCT
GGCTGAGAAAGGTCTGGACTGA

Upstream 100 bases:

>100_bases
GGCTTTATCGAATCGCGCCGGCTTATCGGCTGGTCCGTTCCGGCCTAGCTTTGTCCGGACGGCATACAGATGATGGAGAG
GGGAAAAATTGAGGTTTTCT

Downstream 100 bases:

>100_bases
CTTTCGGACAGGGCCACGTCATCGGCGTGGCCTGTTCATCGGACGCAGCTTGTGGCCGGGTTCGATGATCGACCCGGCCG
CAATCCTTTCAGGGGAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSIHGDHLYTFYQIPQDAKSTPI
VMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQPRRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQ
VDQSPETLEQFLRWITPNTGPYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG
EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAKLWVEAVNRHGGDVTLVHLPE
IGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD

Sequences:

>Translated_353_residues
MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSIHGDHLYTFYQIPQDAKSTPI
VMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQPRRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQ
VDQSPETLEQFLRWITPNTGPYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG
EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAKLWVEAVNRHGGDVTLVHLPE
IGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD
>Mature_353_residues
MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSIHGDHLYTFYQIPQDAKSTPI
VMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQPRRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQ
VDQSPETLEQFLRWITPNTGPYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG
EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAKLWVEAVNRHGGDVTLVHLPE
IGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38727; Mature: 38727

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSI
CCHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCEEECCEEEECCCCCCCCCCCCCCCCC
HGDHLYTFYQIPQDAKSTPIVMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQP
CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC
RRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQVDQSPETLEQFLRWITPNTG
CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCEECCCC
EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHH
LWVEAVNRHGGDVTLVHLPEIGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSI
CCHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCEEECCEEEECCCCCCCCCCCCCCCCC
HGDHLYTFYQIPQDAKSTPIVMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQP
CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC
RRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQVDQSPETLEQFLRWITPNTG
CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCEECCCC
EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHH
LWVEAVNRHGGDVTLVHLPEIGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA