| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385957
Identifier: 119385957
GI number: 119385957
Start: 401247
End: 402308
Strand: Direct
Name: 119385957
Synonym: Pden_3235
Alternate gene names: NA
Gene position: 401247-402308 (Clockwise)
Preceding gene: 119385953
Following gene: 119385958
Centisome position: 23.19
GC content: 64.97
Gene sequence:
>1062_bases ATGAACTTTCTGGGGGCATGTATGGTCTCGACCGGTATTCTCGCGGCTGCCAGTGCCTCGGCGCAGCAGGCCGAGCCGCT TGTGATCAGCGAGCAAGGCAGCTTCTTCGCGGGCGGCTCGGTCGTCACCACGCCAGGCACCTACAACAACAATGTGCCGA CCGCCGAGGGGCAGAGCATCCACGGCGATCACCTCTACACCTTCTACCAGATTCCGCAGGATGCGAAGTCCACGCCTATC GTGATGCTGCATGGCCACATGCAATCGGCGCGCAGTTGGGAGACGACGCCGGACGGGCGCGAGGGCTTCCAGACCCTGTT CCTGCGCAAGGGCTATCCGGTCTATCTGGTCGATCAGCCGCGCCGGGGCCGGGCCGGCAACAGCCTTGAGGCCGCGACCA TCGAGCCGACACCGCTCGATCAGTTGTTCTTCGACCAGTTTCGCCTGGGCATTTGGCCCGATTATTTCGAGGGCGTCCAG GTCGACCAGAGCCCGGAGACGCTGGAGCAGTTCCTGCGCTGGATCACCCCGAACACCGGCCCCTATGATCCGAATGTAGT CGCGGATGCGATGTCGGCGCTGGTCGACAGGACCGGCCCGGCGATCCTGTTCACCCATTCGCAGGGCGGCGGCCCCGGCT GGCTGACGGCGATCAGGAACGAGGACATTCGAGCAATCGTCTCCTACGAGCCGGGCAGCGGCTTCGTCTTCCCCGAAGGG GAGGTGCCGGAGACCATGCCGAGCGCGGGCGGGCCGCTGGCGGCGGAAGCCGTGCCGCTGGAGGATTTCCAGAAGCTGAC CCGCTTCCCGATCCTGATCTACTATGGCGACAACTTCCCCACCGAGCCGACCGAGCGCCGCGGCGAGGACATCTGGCGCG TGCGGCTGGACATGGCGAAGCTGTGGGTCGAGGCGGTCAACCGTCATGGCGGCGACGTCACGCTGGTTCACCTGCCCGAG ATCGGCATCACCGGGAACACGCATTTCCCGTTCTCGGACCTGAACAACGTCGAGATCGCCGATCACACCGCGCAGTTCCT GGCTGAGAAAGGTCTGGACTGA
Upstream 100 bases:
>100_bases GGCTTTATCGAATCGCGCCGGCTTATCGGCTGGTCCGTTCCGGCCTAGCTTTGTCCGGACGGCATACAGATGATGGAGAG GGGAAAAATTGAGGTTTTCT
Downstream 100 bases:
>100_bases CTTTCGGACAGGGCCACGTCATCGGCGTGGCCTGTTCATCGGACGCAGCTTGTGGCCGGGTTCGATGATCGACCCGGCCG CAATCCTTTCAGGGGAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSIHGDHLYTFYQIPQDAKSTPI VMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQPRRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQ VDQSPETLEQFLRWITPNTGPYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAKLWVEAVNRHGGDVTLVHLPE IGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD
Sequences:
>Translated_353_residues MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSIHGDHLYTFYQIPQDAKSTPI VMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQPRRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQ VDQSPETLEQFLRWITPNTGPYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAKLWVEAVNRHGGDVTLVHLPE IGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD >Mature_353_residues MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSIHGDHLYTFYQIPQDAKSTPI VMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQPRRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQ VDQSPETLEQFLRWITPNTGPYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAKLWVEAVNRHGGDVTLVHLPE IGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38727; Mature: 38727
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSI CCHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCEEECCEEEECCCCCCCCCCCCCCCCC HGDHLYTFYQIPQDAKSTPIVMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQP CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC RRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQVDQSPETLEQFLRWITPNTG CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCC PYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCEECCCC EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAK CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHH LWVEAVNRHGGDVTLVHLPEIGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCC >Mature Secondary Structure MNFLGACMVSTGILAAASASAQQAEPLVISEQGSFFAGGSVVTTPGTYNNNVPTAEGQSI CCHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCEEECCEEEECCCCCCCCCCCCCCCCC HGDHLYTFYQIPQDAKSTPIVMLHGHMQSARSWETTPDGREGFQTLFLRKGYPVYLVDQP CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC RRGRAGNSLEAATIEPTPLDQLFFDQFRLGIWPDYFEGVQVDQSPETLEQFLRWITPNTG CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCC PYDPNVVADAMSALVDRTGPAILFTHSQGGGPGWLTAIRNEDIRAIVSYEPGSGFVFPEG CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCEECCCC EVPETMPSAGGPLAAEAVPLEDFQKLTRFPILIYYGDNFPTEPTERRGEDIWRVRLDMAK CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHH LWVEAVNRHGGDVTLVHLPEIGITGNTHFPFSDLNNVEIADHTAQFLAEKGLD HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA