Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385920

Identifier: 119385920

GI number: 119385920

Start: 363267

End: 364064

Strand: Direct

Name: 119385920

Synonym: Pden_3198

Alternate gene names: NA

Gene position: 363267-364064 (Clockwise)

Preceding gene: 119385919

Following gene: 119385921

Centisome position: 21.0

GC content: 67.29

Gene sequence:

>798_bases
ATGACGCGCAATACGACCGCTATCCCGCACCCCGTTCGCCGCATCGCCAGCACCACGGCACTCGCCGTCGCGCTCGCCAT
CCCGCTGGCGCTGGCCCCTGTCCTCACGACACCGGCCCATGCCTTCTTCGGTGGTTTTGGGCGGATCGTCTACGACCCGA
CCAACCATGCCGAGAACCTGCTGACCGCCGCCAGGTCGCTGGAGCAGATCAACAACCAGATCGCCTCGCTGCAGAACGAG
GCGCAGATGCTGATCAACCAGGCCCGCGATCTCGCCAGCCTGCCGCATAGCTCGCTGCAGCAATTGCAGCAGAACGTCAC
CCGCACCCAGCAGTTGCTCGACGAGGCCCAGAACATCGCCTTCGAGGTGCAGGAGGTCGATCAGGCTTTCGAGCGGGAAT
ACGGCACGCCGGATCTCTCGACATCCGAGCAGCAACTGCTGGCCGATGCCCGGACGCGCTGGAGCAACACCATGGGCGGG
CTTCAGGACGCCATGCGCGTCCAGTCCGGCGTCACCAACAACATCGAGGCGCAGCGGGCCGAGATGGCCGCGCTGGTCGA
GCAGAGCCAGAATGCTGACGGCGCCTTGCAGGCCAGCCAGGCCGGCAACCAGTTGCTGGCCCTGCAATCGCAGCAACTGT
CCGACCTCACCGCGCTCCTCGCCGCCACCGGCCGGGCCGAGGCACTGAGCGAGGCCGAGCGCTCGGCGGCGGCCGAACAG
GGCCGCATCCAGCGCGAACGGTTTCTGACACCCGGCGCCGGCTACCAGCCCGGCAATGCCCGGATGTTCAACGACTGA

Upstream 100 bases:

>100_bases
ACGGCCCTGCCGGTGACGAGATCGAGCCTGGCGACGCCGAGGCAGCATCCATCCCCGCAGAAGCAGGACCAGAACCAAAC
GCAGACAAGGAGATCGAGCC

Downstream 100 bases:

>100_bases
AAGCCCGAGGAGGCACCATCATGGAGGGCAAGGCGATGGTCCGGCTCATTGCCATCCTGTTCCTGGCGATCGTCATGACC
GTGACGCTGATCCGCATGGA

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTRNTTAIPHPVRRIASTTALAVALAIPLALAPVLTTPAHAFFGGFGRIVYDPTNHAENLLTAARSLEQINNQIASLQNE
AQMLINQARDLASLPHSSLQQLQQNVTRTQQLLDEAQNIAFEVQEVDQAFEREYGTPDLSTSEQQLLADARTRWSNTMGG
LQDAMRVQSGVTNNIEAQRAEMAALVEQSQNADGALQASQAGNQLLALQSQQLSDLTALLAATGRAEALSEAERSAAAEQ
GRIQRERFLTPGAGYQPGNARMFND

Sequences:

>Translated_265_residues
MTRNTTAIPHPVRRIASTTALAVALAIPLALAPVLTTPAHAFFGGFGRIVYDPTNHAENLLTAARSLEQINNQIASLQNE
AQMLINQARDLASLPHSSLQQLQQNVTRTQQLLDEAQNIAFEVQEVDQAFEREYGTPDLSTSEQQLLADARTRWSNTMGG
LQDAMRVQSGVTNNIEAQRAEMAALVEQSQNADGALQASQAGNQLLALQSQQLSDLTALLAATGRAEALSEAERSAAAEQ
GRIQRERFLTPGAGYQPGNARMFND
>Mature_264_residues
TRNTTAIPHPVRRIASTTALAVALAIPLALAPVLTTPAHAFFGGFGRIVYDPTNHAENLLTAARSLEQINNQIASLQNEA
QMLINQARDLASLPHSSLQQLQQNVTRTQQLLDEAQNIAFEVQEVDQAFEREYGTPDLSTSEQQLLADARTRWSNTMGGL
QDAMRVQSGVTNNIEAQRAEMAALVEQSQNADGALQASQAGNQLLALQSQQLSDLTALLAATGRAEALSEAERSAAAEQG
RIQRERFLTPGAGYQPGNARMFND

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28658; Mature: 28527

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNTTAIPHPVRRIASTTALAVALAIPLALAPVLTTPAHAFFGGFGRIVYDPTNHAENL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEECCCHHHHHH
LTAARSLEQINNQIASLQNEAQMLINQARDLASLPHSSLQQLQQNVTRTQQLLDEAQNIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FEVQEVDQAFEREYGTPDLSTSEQQLLADARTRWSNTMGGLQDAMRVQSGVTNNIEAQRA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EMAALVEQSQNADGALQASQAGNQLLALQSQQLSDLTALLAATGRAEALSEAERSAAAEQ
HHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GRIQRERFLTPGAGYQPGNARMFND
HHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRNTTAIPHPVRRIASTTALAVALAIPLALAPVLTTPAHAFFGGFGRIVYDPTNHAENL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEECCCHHHHHH
LTAARSLEQINNQIASLQNEAQMLINQARDLASLPHSSLQQLQQNVTRTQQLLDEAQNIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FEVQEVDQAFEREYGTPDLSTSEQQLLADARTRWSNTMGGLQDAMRVQSGVTNNIEAQRA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EMAALVEQSQNADGALQASQAGNQLLALQSQQLSDLTALLAATGRAEALSEAERSAAAEQ
HHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GRIQRERFLTPGAGYQPGNARMFND
HHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA