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The map label for this gene is 119385918

Identifier: 119385918

GI number: 119385918

Start: 360343

End: 360624

Strand: Direct

Name: 119385918

Synonym: Pden_3196

Alternate gene names: NA

Gene position: 360343-360624 (Clockwise)

Preceding gene: 119385917

Following gene: 119385919

Centisome position: 20.83

GC content: 68.79

Gene sequence:

>282_bases
ATGTCCGCAGGTTTCGAGCAGCTTTCCGAGGTTCCGGGCTTTTCGGTCCCGGTGCATCGCGCCCTGAACGAGCCGATCCT
GCTCGGCGGCGCGCCGAGGAGCATCGCCATCCTGAACGGCACGCTGGCCGGCGCGGTCGGCCTCGGGTTGCAGCTTTGGC
TGGCCGGTATCCTGATCTGGGCCGTTGGCCATCTCGCCACCGTCTGGGCTGCGAAACGCGATCCGCTCTTCGTCGAGGTC
GGGCGGCGGCATCTGCGTCTCCCCGGCCACCTCGCGGTCTGA

Upstream 100 bases:

>100_bases
TTCGTCGGCTGATCCAGATCGTCTTCGGCATCTCCATCGCCTTCGCGGCCAGTTCCTTCTTCCTGTCCTTCTTCAGCTTC
GGCGGCGGAGCGCTGGTGTA

Downstream 100 bases:

>100_bases
CGGAGCCCTGCCATGATGAACCTCGCCGAATACCGCGGCAGCGCCTCCCGCCTCGCCGATTTCCTGCCCTGGGCGGCACT
GGTCACGCCGGGCGTGGTGC

Product: conjugal transfer protein TrbB

Products: NA

Alternate protein names: Conjugal Transfer Protein TrbB; Conjugal Transfer Protein; Type IV Secretory Pathway VirB3 Family Protein; Conjugal Transfer TrbD Transmembrane Protein; Conjugal Transfer Trbd Transmembrane Protein; Type IV Secretory Pathway TrbD Component; Type Iv Secretory Pathway Virb3 Family Protein; Conjugal Transfer Protein Trbd; Type IV Secretory Pathway TrbD Component-Like Protein; Conjugative Transfer Protein TrbD; P-Type Conjugative Transfer Protein TrbD

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSAGFEQLSEVPGFSVPVHRALNEPILLGGAPRSIAILNGTLAGAVGLGLQLWLAGILIWAVGHLATVWAAKRDPLFVEV
GRRHLRLPGHLAV

Sequences:

>Translated_93_residues
MSAGFEQLSEVPGFSVPVHRALNEPILLGGAPRSIAILNGTLAGAVGLGLQLWLAGILIWAVGHLATVWAAKRDPLFVEV
GRRHLRLPGHLAV
>Mature_92_residues
SAGFEQLSEVPGFSVPVHRALNEPILLGGAPRSIAILNGTLAGAVGLGLQLWLAGILIWAVGHLATVWAAKRDPLFVEVG
RRHLRLPGHLAV

Specific function: Unknown

COG id: COG5268

COG function: function code NU; Type IV secretory pathway, TrbD component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9819; Mature: 9688

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGFEQLSEVPGFSVPVHRALNEPILLGGAPRSIAILNGTLAGAVGLGLQLWLAGILIW
CCCCHHHHHHCCCCCCCHHHHCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
AVGHLATVWAAKRDPLFVEVGRRHLRLPGHLAV
HHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCC
>Mature Secondary Structure 
SAGFEQLSEVPGFSVPVHRALNEPILLGGAPRSIAILNGTLAGAVGLGLQLWLAGILIW
CCCHHHHHHCCCCCCCHHHHCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
AVGHLATVWAAKRDPLFVEVGRRHLRLPGHLAV
HHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA