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The map label for this gene is 119385909

Identifier: 119385909

GI number: 119385909

Start: 352908

End: 354701

Strand: Direct

Name: 119385909

Synonym: Pden_3187

Alternate gene names: NA

Gene position: 352908-354701 (Clockwise)

Preceding gene: 119385908

Following gene: 119385910

Centisome position: 20.4

GC content: 69.57

Gene sequence:

>1794_bases
ATGAGCGCAGACGATCACGAGTTCCGCATCCGTCCGGGCAGGCCGCGCTCGACCCCGGCGCCACGCAGCGGCAGCTTCGT
CAATCAGGTGCTGCGCGCGGCACGGAAGGCGGGGCCGGTCAGGGCGTGGTCCTCCAAATCGAAAGGGTTTCCCCGCCCCG
GTCACTCCACCTTCGGGCGCGGGCGCGCCGGCTTCGGCCGCTCGCGGCTGTTCTCGCCCCAGCGCCGGGTGGTGGTGAAA
GCGCGGGTGGTCCGGCACAGGGGCCGGTCCTTCCGCTCGGCGCCGATGACGGCGCATCTCAGCTATCTCAAACGCGAGGG
CGTCAGCCGCGACGACAGCGACGGGCTGATGTTCGATGCCACCTCCGACGATGCCGACGATTCCGCCTTCGCCGAACGCT
GCCAGGACGACCGGCACCATTTCCGCTTCATCGTCTCGCCCGAGGATGCGTCCGACATGACCGATCTGCGCGCCTTCACC
CGCGATCTGGTCAGGCAGATGGAGGCCGATCTTGGCACGAAACTGGACTGGATCGCCGCCGATCACTGGAACACCGACAA
TCCGCATGTGCATCTGCTGGTCCGTGGCGTGGATGACGGCGGCAAGGATCTGGTGATTTCGCGCGACTATATCAGCTACG
GCTTGCGCTCCCGCGCCGAGGATCTCGTCTCCATCGAACTCGGCCCCAGGCAGGAACACGAGATCCGCTCGGCCCTGGAA
CGCGAGGTGACGGCGGAACGCTGGACCCGGCTCGATGCGGCGATCCGGCGCCAGGCCGACGATCTGGGATTCATCGATCT
GCGCCCCGATGCGCCAATCCGGGGCGAACCCACCGGGCGGAGTCCCGAACCTCGGCGATTGATGATCGGGCGGCTGCAAC
ATCTGGAGAAGATGGGTCTCGCCACATTGGCCGGTCCCGGCGAATGGATGCTGGGGCTGGAGGCGGAGACCACCCTGCGC
GACCTCGGCCGGCGTGGCGACATCGTCAGCCGGATGCACCGGGCCTTCGCCGCCCGCGACGAGGAACGGGGCGTTCTGGA
CTATGTCACCGACAGCGGCCAGGACGGCGCGTCCGTTATCGGCCGGCTGGTCGATCTGGGCCTGCATGACGAACTGACCG
GCGAGGCCTATGCGGTGATCGACGGCACCGACGGCCGCGCCCATCATATCCGCCTGCGCGGGATCGAGGCCTTCGATCAG
GCCCCGCCGCTCGGCGGCATCGTCGAACTGCGCCGCTTCGGCGGGCCGGAGGATCCGAACCCGACCCTGCGGCTCGCCCA
TCGTTCCGATCTCGATCTGCAAGCCCAGATCGCCGCGCCCGGCGCCACCTGGCTCGATTACCGGCTGGTCGAGCGCAAAC
CGATGCCGCTGGCCATGGGCGGTTTCGGCAAGGAGGTGCGCGAGGCGATGGATGCCCGCGCCGAGCATCTGGTCGGGGAA
GGCCTCGCCCGGCGCGAGGGTGGGCGCATCCTGGTGCGGCGCCATCTGCTCGCAACCCTGCGCCGCCGCGAACTCGATGC
CGTCGGCGCCGATCTCGCCCGGAAAACCGGGCTGCCGCATGTGCAGGCCCGGCCCGGCGATCATGTCGCCGGCACCTGCG
GCCGGCGGATGTCGCTCTCCTCGGGCCGCTTCGCCGTCATCGAGGGTTCCGGACCCGGCGGAGGCCTGGGCTTTCAGCTG
GTGCCCTGGTCGCGGGATCTCGAAGGCCAGCTCGGTCGGCATGTCTCCGGCGTGGCGAAACCCGGCGGCGGCATCGACTG
GTCGCTTGGGCGCAGGCGCGACCTCGGCCTCTGA

Upstream 100 bases:

>100_bases
GCCGGTCGGTCGGCGACGGTGCCGCCTTTTTGGGATTTTCCTGCGATTTAAACGGTGTTTTCGGCACTGTTGCGGAAATC
GCCGGGCAGGGAGGCCCAGG

Downstream 100 bases:

>100_bases
CGAAAGGAGATATTTCCATGTCCGGCACGAAGATCCTCTGGGGCCAGATCGCCGTGGTTTTCCTGATCGTGCTGATCTCG
GTCTGGTCGGGCACGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MSADDHEFRIRPGRPRSTPAPRSGSFVNQVLRAARKAGPVRAWSSKSKGFPRPGHSTFGRGRAGFGRSRLFSPQRRVVVK
ARVVRHRGRSFRSAPMTAHLSYLKREGVSRDDSDGLMFDATSDDADDSAFAERCQDDRHHFRFIVSPEDASDMTDLRAFT
RDLVRQMEADLGTKLDWIAADHWNTDNPHVHLLVRGVDDGGKDLVISRDYISYGLRSRAEDLVSIELGPRQEHEIRSALE
REVTAERWTRLDAAIRRQADDLGFIDLRPDAPIRGEPTGRSPEPRRLMIGRLQHLEKMGLATLAGPGEWMLGLEAETTLR
DLGRRGDIVSRMHRAFAARDEERGVLDYVTDSGQDGASVIGRLVDLGLHDELTGEAYAVIDGTDGRAHHIRLRGIEAFDQ
APPLGGIVELRRFGGPEDPNPTLRLAHRSDLDLQAQIAAPGATWLDYRLVERKPMPLAMGGFGKEVREAMDARAEHLVGE
GLARREGGRILVRRHLLATLRRRELDAVGADLARKTGLPHVQARPGDHVAGTCGRRMSLSSGRFAVIEGSGPGGGLGFQL
VPWSRDLEGQLGRHVSGVAKPGGGIDWSLGRRRDLGL

Sequences:

>Translated_597_residues
MSADDHEFRIRPGRPRSTPAPRSGSFVNQVLRAARKAGPVRAWSSKSKGFPRPGHSTFGRGRAGFGRSRLFSPQRRVVVK
ARVVRHRGRSFRSAPMTAHLSYLKREGVSRDDSDGLMFDATSDDADDSAFAERCQDDRHHFRFIVSPEDASDMTDLRAFT
RDLVRQMEADLGTKLDWIAADHWNTDNPHVHLLVRGVDDGGKDLVISRDYISYGLRSRAEDLVSIELGPRQEHEIRSALE
REVTAERWTRLDAAIRRQADDLGFIDLRPDAPIRGEPTGRSPEPRRLMIGRLQHLEKMGLATLAGPGEWMLGLEAETTLR
DLGRRGDIVSRMHRAFAARDEERGVLDYVTDSGQDGASVIGRLVDLGLHDELTGEAYAVIDGTDGRAHHIRLRGIEAFDQ
APPLGGIVELRRFGGPEDPNPTLRLAHRSDLDLQAQIAAPGATWLDYRLVERKPMPLAMGGFGKEVREAMDARAEHLVGE
GLARREGGRILVRRHLLATLRRRELDAVGADLARKTGLPHVQARPGDHVAGTCGRRMSLSSGRFAVIEGSGPGGGLGFQL
VPWSRDLEGQLGRHVSGVAKPGGGIDWSLGRRRDLGL
>Mature_596_residues
SADDHEFRIRPGRPRSTPAPRSGSFVNQVLRAARKAGPVRAWSSKSKGFPRPGHSTFGRGRAGFGRSRLFSPQRRVVVKA
RVVRHRGRSFRSAPMTAHLSYLKREGVSRDDSDGLMFDATSDDADDSAFAERCQDDRHHFRFIVSPEDASDMTDLRAFTR
DLVRQMEADLGTKLDWIAADHWNTDNPHVHLLVRGVDDGGKDLVISRDYISYGLRSRAEDLVSIELGPRQEHEIRSALER
EVTAERWTRLDAAIRRQADDLGFIDLRPDAPIRGEPTGRSPEPRRLMIGRLQHLEKMGLATLAGPGEWMLGLEAETTLRD
LGRRGDIVSRMHRAFAARDEERGVLDYVTDSGQDGASVIGRLVDLGLHDELTGEAYAVIDGTDGRAHHIRLRGIEAFDQA
PPLGGIVELRRFGGPEDPNPTLRLAHRSDLDLQAQIAAPGATWLDYRLVERKPMPLAMGGFGKEVREAMDARAEHLVGEG
LARREGGRILVRRHLLATLRRRELDAVGADLARKTGLPHVQARPGDHVAGTCGRRMSLSSGRFAVIEGSGPGGGLGFQLV
PWSRDLEGQLGRHVSGVAKPGGGIDWSLGRRRDLGL

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65968; Mature: 65837

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADDHEFRIRPGRPRSTPAPRSGSFVNQVLRAARKAGPVRAWSSKSKGFPRPGHSTFGR
CCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GRAGFGRSRLFSPQRRVVVKARVVRHRGRSFRSAPMTAHLSYLKREGVSRDDSDGLMFDA
CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEC
TSDDADDSAFAERCQDDRHHFRFIVSPEDASDMTDLRAFTRDLVRQMEADLGTKLDWIAA
CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
DHWNTDNPHVHLLVRGVDDGGKDLVISRDYISYGLRSRAEDLVSIELGPRQEHEIRSALE
CCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
REVTAERWTRLDAAIRRQADDLGFIDLRPDAPIRGEPTGRSPEPRRLMIGRLQHLEKMGL
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
ATLAGPGEWMLGLEAETTLRDLGRRGDIVSRMHRAFAARDEERGVLDYVTDSGQDGASVI
CEECCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHH
GRLVDLGLHDELTGEAYAVIDGTDGRAHHIRLRGIEAFDQAPPLGGIVELRRFGGPEDPN
HHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHCCCCCCHHHHHHHCCCCCCCC
PTLRLAHRSDLDLQAQIAAPGATWLDYRLVERKPMPLAMGGFGKEVREAMDARAEHLVGE
CCEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHC
GLARREGGRILVRRHLLATLRRRELDAVGADLARKTGLPHVQARPGDHVAGTCGRRMSLS
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECC
SGRFAVIEGSGPGGGLGFQLVPWSRDLEGQLGRHVSGVAKPGGGIDWSLGRRRDLGL
CCCEEEEECCCCCCCCCEEEECCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SADDHEFRIRPGRPRSTPAPRSGSFVNQVLRAARKAGPVRAWSSKSKGFPRPGHSTFGR
CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GRAGFGRSRLFSPQRRVVVKARVVRHRGRSFRSAPMTAHLSYLKREGVSRDDSDGLMFDA
CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEC
TSDDADDSAFAERCQDDRHHFRFIVSPEDASDMTDLRAFTRDLVRQMEADLGTKLDWIAA
CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
DHWNTDNPHVHLLVRGVDDGGKDLVISRDYISYGLRSRAEDLVSIELGPRQEHEIRSALE
CCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
REVTAERWTRLDAAIRRQADDLGFIDLRPDAPIRGEPTGRSPEPRRLMIGRLQHLEKMGL
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
ATLAGPGEWMLGLEAETTLRDLGRRGDIVSRMHRAFAARDEERGVLDYVTDSGQDGASVI
CEECCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHH
GRLVDLGLHDELTGEAYAVIDGTDGRAHHIRLRGIEAFDQAPPLGGIVELRRFGGPEDPN
HHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHCCCCCCHHHHHHHCCCCCCCC
PTLRLAHRSDLDLQAQIAAPGATWLDYRLVERKPMPLAMGGFGKEVREAMDARAEHLVGE
CCEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHC
GLARREGGRILVRRHLLATLRRRELDAVGADLARKTGLPHVQARPGDHVAGTCGRRMSLS
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECC
SGRFAVIEGSGPGGGLGFQLVPWSRDLEGQLGRHVSGVAKPGGGIDWSLGRRRDLGL
CCCEEEEECCCCCCCCCEEEECCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA