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The map label for this gene is 119385901

Identifier: 119385901

GI number: 119385901

Start: 346902

End: 348014

Strand: Direct

Name: 119385901

Synonym: Pden_3179

Alternate gene names: NA

Gene position: 346902-348014 (Clockwise)

Preceding gene: 119385900

Following gene: 119385902

Centisome position: 20.05

GC content: 63.97

Gene sequence:

>1113_bases
ATGAGAACGTCCCGCCGCACCCGTCTTTCCGGCGAGCGCCGCCGCCTCAGCCCCTTCGTGGTGACGGGCACGGGCGGCGA
GGTCCGCCCGCGCGATCAGCGCGATCTGATGGAACGTCCGTTCTTCTCGCTCGCAAAGACCAAGCGCCTGACGCCCATTC
ACTATGAATCCGGCGGTGTCCAGGTCCATGTCCAGGGCTTTCCCGAGCACGGCATGGCGACCATCTGGGATGCCGACGTG
CTGATCTGGGCCGCCAGCCAGATCGTCGATGCCGAGAACGCCGGGCTGCAAACCTCGCGCTTCCTGCGTTTCACCCCCTA
CCAGCTCCTGACCGCCATCGGCCGCCAGACCGGCGCGCGCGACTATCGCCTGCTGAAAGGCACGTTGGCGCGGCTGCAGT
CGACGGTGATCCGGACCACGATCCGGCATGGCGAGCACTGGCGCCGACACCAATTCTCCTGGATCGGCGAGTGGGAAGAG
ATGACGACAGCCGGGGGCCGGGTCGAGGGCATGGAATTCGTGCTGCCCGAATGGTTCTATCGCGGCGTGCTCGACCGCTC
GCTGGTCCTGACCATCGACCCGGCCTATTTCCGGCTCAAGGGCGGCATCGAGCGCTGGCTCTACCGCGTCGCCCGCAAGC
ATGCGGGTCGCCAGCCATCCGGCTGGTGCTTCGACATCCCGCATCTGCATGCGAAGTCGGGCAGTCTCGTCCGCCTGTCG
GATTTCGCGCTTCAGATCAGACGGATTGCTCAACGGCAATCCCTGCCGGGATATCGGCTGCGGATCGAGCGCCGAGGCGA
TGTCGAGATGCTGCGGATCCAGCCTGTGAGTTATCCACAACGACTTGTGGATAACTGCGTGAATGGTATCGGGACTTCGG
ACGCACGAAATGTGGACGATATCGGGACATCACACGCAGGACTATCGGGACTTCGCACGCACGGATCGCAGTCAAGCCTT
TGGGATAGCAAAGGGAATCCGGCCCGTAACTTATCTAACTTAAAAGACTCTAACATAGTAGAGGCGCGCCGGGCGGTGGA
TAACCCCCGCCCGGGCGCCCATACGGTCCCTCATTCGCGAAACCGGCGCGGGCCGGAAGGGGGCGGCGAATGA

Upstream 100 bases:

>100_bases
ACCTCGACCTCCGATCCGCGCGGCACGGTGCTGCCCGCCAAGCGCCATGCCGTGGCGCCGCCGGCCCATGCCGGCCGCTA
CCGGCGCTGAGGGGGCAGCG

Downstream 100 bases:

>100_bases
CCCCGCATGCGCTTCCCCTGTCGCAGCCAGGAGCATGCTTTCGCTTTTCGCAGCCATACCACGATCCGCTGCGAGCACCT
ACGACATCCTTCACTTTCCA

Product: replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MRTSRRTRLSGERRRLSPFVVTGTGGEVRPRDQRDLMERPFFSLAKTKRLTPIHYESGGVQVHVQGFPEHGMATIWDADV
LIWAASQIVDAENAGLQTSRFLRFTPYQLLTAIGRQTGARDYRLLKGTLARLQSTVIRTTIRHGEHWRRHQFSWIGEWEE
MTTAGGRVEGMEFVLPEWFYRGVLDRSLVLTIDPAYFRLKGGIERWLYRVARKHAGRQPSGWCFDIPHLHAKSGSLVRLS
DFALQIRRIAQRQSLPGYRLRIERRGDVEMLRIQPVSYPQRLVDNCVNGIGTSDARNVDDIGTSHAGLSGLRTHGSQSSL
WDSKGNPARNLSNLKDSNIVEARRAVDNPRPGAHTVPHSRNRRGPEGGGE

Sequences:

>Translated_370_residues
MRTSRRTRLSGERRRLSPFVVTGTGGEVRPRDQRDLMERPFFSLAKTKRLTPIHYESGGVQVHVQGFPEHGMATIWDADV
LIWAASQIVDAENAGLQTSRFLRFTPYQLLTAIGRQTGARDYRLLKGTLARLQSTVIRTTIRHGEHWRRHQFSWIGEWEE
MTTAGGRVEGMEFVLPEWFYRGVLDRSLVLTIDPAYFRLKGGIERWLYRVARKHAGRQPSGWCFDIPHLHAKSGSLVRLS
DFALQIRRIAQRQSLPGYRLRIERRGDVEMLRIQPVSYPQRLVDNCVNGIGTSDARNVDDIGTSHAGLSGLRTHGSQSSL
WDSKGNPARNLSNLKDSNIVEARRAVDNPRPGAHTVPHSRNRRGPEGGGE
>Mature_370_residues
MRTSRRTRLSGERRRLSPFVVTGTGGEVRPRDQRDLMERPFFSLAKTKRLTPIHYESGGVQVHVQGFPEHGMATIWDADV
LIWAASQIVDAENAGLQTSRFLRFTPYQLLTAIGRQTGARDYRLLKGTLARLQSTVIRTTIRHGEHWRRHQFSWIGEWEE
MTTAGGRVEGMEFVLPEWFYRGVLDRSLVLTIDPAYFRLKGGIERWLYRVARKHAGRQPSGWCFDIPHLHAKSGSLVRLS
DFALQIRRIAQRQSLPGYRLRIERRGDVEMLRIQPVSYPQRLVDNCVNGIGTSDARNVDDIGTSHAGLSGLRTHGSQSSL
WDSKGNPARNLSNLKDSNIVEARRAVDNPRPGAHTVPHSRNRRGPEGGGE

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 41970; Mature: 41970

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSRRTRLSGERRRLSPFVVTGTGGEVRPRDQRDLMERPFFSLAKTKRLTPIHYESGGV
CCCCCCCCCCCCHHCCCCEEEECCCCCCCCCHHHHHHHCHHHHHHHHCCCCEEEECCCCE
QVHVQGFPEHGMATIWDADVLIWAASQIVDAENAGLQTSRFLRFTPYQLLTAIGRQTGAR
EEEEECCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHEEECHHHHHHHHHHHCCCC
DYRLLKGTLARLQSTVIRTTIRHGEHWRRHQFSWIGEWEEMTTAGGRVEGMEFVLPEWFY
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHH
RGVLDRSLVLTIDPAYFRLKGGIERWLYRVARKHAGRQPSGWCFDIPHLHAKSGSLVRLS
HHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEHH
DFALQIRRIAQRQSLPGYRLRIERRGDVEMLRIQPVSYPQRLVDNCVNGIGTSDARNVDD
HHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHH
IGTSHAGLSGLRTHGSQSSLWDSKGNPARNLSNLKDSNIVEARRAVDNPRPGAHTVPHSR
CCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
NRRGPEGGGE
CCCCCCCCCC
>Mature Secondary Structure
MRTSRRTRLSGERRRLSPFVVTGTGGEVRPRDQRDLMERPFFSLAKTKRLTPIHYESGGV
CCCCCCCCCCCCHHCCCCEEEECCCCCCCCCHHHHHHHCHHHHHHHHCCCCEEEECCCCE
QVHVQGFPEHGMATIWDADVLIWAASQIVDAENAGLQTSRFLRFTPYQLLTAIGRQTGAR
EEEEECCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHEEECHHHHHHHHHHHCCCC
DYRLLKGTLARLQSTVIRTTIRHGEHWRRHQFSWIGEWEEMTTAGGRVEGMEFVLPEWFY
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHH
RGVLDRSLVLTIDPAYFRLKGGIERWLYRVARKHAGRQPSGWCFDIPHLHAKSGSLVRLS
HHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEHH
DFALQIRRIAQRQSLPGYRLRIERRGDVEMLRIQPVSYPQRLVDNCVNGIGTSDARNVDD
HHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHH
IGTSHAGLSGLRTHGSQSSLWDSKGNPARNLSNLKDSNIVEARRAVDNPRPGAHTVPHSR
CCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
NRRGPEGGGE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]