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The map label for this gene is hvrA [H]

Identifier: 119385878

GI number: 119385878

Start: 332449

End: 332766

Strand: Direct

Name: hvrA [H]

Synonym: Pden_3156

Alternate gene names: 119385878

Gene position: 332449-332766 (Clockwise)

Preceding gene: 119385877

Following gene: 119385879

Centisome position: 19.22

GC content: 62.89

Gene sequence:

>318_bases
ATGACCGATATCGACCTGAATGCCTTGTCGCTGGCCGAATTGAAGCAGCTGGAAAAGAACCTGACCAAGGCCATCGCCTC
TTTCGAGGATCGCCGCAAGGCCGAGGCTCGTGCCGCGGCGGAAGCGGTGGCAAAGGAACACGGTTTCTCGCTGGGCGAAC
TGGCGGAAATGACCCCGGCGCAAAAGCGCGCCGCCGTTGCGCCGAAATACCGCCATCCGGAAAACCCCGAGATCACCTGG
AGCGGTCGCGGCCGCAAGCCCGCCTGGATCGCTGGGGCTCTGGAGGCCGGCAAATCCCTCGAAGACTTTGCCATCTGA

Upstream 100 bases:

>100_bases
GATGATTTGTCCGAGGCTTGGGCGGATCCCCGATTGAGCGTGGGAATTGCCGTTTGACCGCTGTTGGATTAAACCGGCGC
CCTAACAACAGGGGACGTTT

Downstream 100 bases:

>100_bases
CCGGGGAGGGCAGGGGTGTTCCAGCCTCCGAATGCGGTGCGGCTGCATGTCTCCCTGGCCGAGATCGAGCCGGAGATCTG
GCGGCGGCTGGTCGTTCCCT

Product: histone family protein nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTDIDLNALSLAELKQLEKNLTKAIASFEDRRKAEARAAAEAVAKEHGFSLGELAEMTPAQKRAAVAPKYRHPENPEITW
SGRGRKPAWIAGALEAGKSLEDFAI

Sequences:

>Translated_105_residues
MTDIDLNALSLAELKQLEKNLTKAIASFEDRRKAEARAAAEAVAKEHGFSLGELAEMTPAQKRAAVAPKYRHPENPEITW
SGRGRKPAWIAGALEAGKSLEDFAI
>Mature_104_residues
TDIDLNALSLAELKQLEKNLTKAIASFEDRRKAEARAAAEAVAKEHGFSLGELAEMTPAQKRAAVAPKYRHPENPEITWS
GRGRKPAWIAGALEAGKSLEDFAI

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 11443; Mature: 11312

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIDLNALSLAELKQLEKNLTKAIASFEDRRKAEARAAAEAVAKEHGFSLGELAEMTPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCH
QKRAAVAPKYRHPENPEITWSGRGRKPAWIAGALEAGKSLEDFAI
HHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure 
TDIDLNALSLAELKQLEKNLTKAIASFEDRRKAEARAAAEAVAKEHGFSLGELAEMTPA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCH
QKRAAVAPKYRHPENPEITWSGRGRKPAWIAGALEAGKSLEDFAI
HHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]