| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385806
Identifier: 119385806
GI number: 119385806
Start: 268005
End: 268373
Strand: Direct
Name: 119385806
Synonym: Pden_3084
Alternate gene names: NA
Gene position: 268005-268373 (Clockwise)
Preceding gene: 119385805
Following gene: 119385807
Centisome position: 15.49
GC content: 57.18
Gene sequence:
>369_bases ATGAAGCTCAAAATGCTATCCGCTATTGGCGTCGCTTGCACCCTTGCGGCATGTGCCGAGAACCCTGACAATATTCGTGC GGGCTATACTTCGGCTGCAACCTATCAGAACATGTCCTGCCAGCAACTGGCATCCGAGGCTATCACTGTCTCGAATCGCG CGCATGATGCGGCGAATGTCCAGCGCCGCCATCAAACCCGCGACGAAGTTGCTATGGCGGCGGGGCTGGTGGTGTTCTGG CCGGCACTTCTGTTCGTTCACGGGAATGACCAGACCACATCGGAGGTTGCACAACTGCGTGGTCAGATGCAGGCGATCGA GCAGGTTTCGGCCGCCAAGAATTGCGGAATGGTCTTCCAGCGGACATAA
Upstream 100 bases:
>100_bases TCCCGACAACATGGAAGTTGATGGCGGGTCCGTTCGGTTCCGCGTGTCCTACCGATTCTGAAACTTTGCTCCTTGCGGAG CATCTTGGAAAGGAAACACG
Downstream 100 bases:
>100_bases CGCCTAGCCGGTCAAGGCAGGCACGACAAGCCGCTTGGAGAAGGCCCCCAAAGAACCCGCAGGCTCGCTTGCGCAGAGGC GAGCCTCTAACGTTATCGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKLKMLSAIGVACTLAACAENPDNIRAGYTSAATYQNMSCQQLASEAITVSNRAHDAANVQRRHQTRDEVAMAAGLVVFW PALLFVHGNDQTTSEVAQLRGQMQAIEQVSAAKNCGMVFQRT
Sequences:
>Translated_122_residues MKLKMLSAIGVACTLAACAENPDNIRAGYTSAATYQNMSCQQLASEAITVSNRAHDAANVQRRHQTRDEVAMAAGLVVFW PALLFVHGNDQTTSEVAQLRGQMQAIEQVSAAKNCGMVFQRT >Mature_122_residues MKLKMLSAIGVACTLAACAENPDNIRAGYTSAATYQNMSCQQLASEAITVSNRAHDAANVQRRHQTRDEVAMAAGLVVFW PALLFVHGNDQTTSEVAQLRGQMQAIEQVSAAKNCGMVFQRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13172; Mature: 13172
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKMLSAIGVACTLAACAENPDNIRAGYTSAATYQNMSCQQLASEAITVSNRAHDAANV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHH QRRHQTRDEVAMAAGLVVFWPALLFVHGNDQTTSEVAQLRGQMQAIEQVSAAKNCGMVFQ HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE RT CC >Mature Secondary Structure MKLKMLSAIGVACTLAACAENPDNIRAGYTSAATYQNMSCQQLASEAITVSNRAHDAANV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHH QRRHQTRDEVAMAAGLVVFWPALLFVHGNDQTTSEVAQLRGQMQAIEQVSAAKNCGMVFQ HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE RT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA