Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385798

Identifier: 119385798

GI number: 119385798

Start: 256282

End: 256695

Strand: Direct

Name: 119385798

Synonym: Pden_3076

Alternate gene names: NA

Gene position: 256282-256695 (Clockwise)

Preceding gene: 119385791

Following gene: 119385799

Centisome position: 14.81

GC content: 64.49

Gene sequence:

>414_bases
ATGGCCGATATCTGCTGTCTCGCCATGACCGGCAAGAAGCCTGACCCGACCGAGGCGCTTTATGTTCAGATCCTGATCGG
CCTGCTGATCTCAAACGGGCCAGGGTCGATCACGGCGCAGGGTGCCAAGGGCGCGGTTTCGGCGGATGGGCCGCAGACGC
CGGACCGGGTCCAGATCAACAAGGCCATGGTCGGTTTTCTGACCCATTCCGGCTACAGCCACGGCGGCAACGGATTCGAG
GGCATGGCCTTCCTGCTGGATCAGTTCCGCGACAAGGGGCTGAAGGATCCGACCGATCCGAACCACGGGCTGGACCTGAC
CGCGATGGCACGCGACTTCGCCTTGGCCTACAAGCGCGACAAGGCGACGGCCAAGGAGCTGGGGACCGAGGTTCGCGCCT
TGCCGGGGGTGTGA

Upstream 100 bases:

>100_bases
ATGCAAATCGGGAGCGGTAAGAAGGGCTCTACCGGTCCGGCATCACCAGCCGGGCAGCCACTGGGGTATCCCGCGCGAAG
AGCGTTCCTCGCGCTGGACC

Downstream 100 bases:

>100_bases
ACCGCGACGATCAGGACCGCCCGGTCTATGGCGGTACACCCTCCGACTTCGCCGTGGTGCAGGCGATCCAGGAGATGAAG
GCGCGCAGGCTGCGGGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MADICCLAMTGKKPDPTEALYVQILIGLLISNGPGSITAQGAKGAVSADGPQTPDRVQINKAMVGFLTHSGYSHGGNGFE
GMAFLLDQFRDKGLKDPTDPNHGLDLTAMARDFALAYKRDKATAKELGTEVRALPGV

Sequences:

>Translated_137_residues
MADICCLAMTGKKPDPTEALYVQILIGLLISNGPGSITAQGAKGAVSADGPQTPDRVQINKAMVGFLTHSGYSHGGNGFE
GMAFLLDQFRDKGLKDPTDPNHGLDLTAMARDFALAYKRDKATAKELGTEVRALPGV
>Mature_136_residues
ADICCLAMTGKKPDPTEALYVQILIGLLISNGPGSITAQGAKGAVSADGPQTPDRVQINKAMVGFLTHSGYSHGGNGFEG
MAFLLDQFRDKGLKDPTDPNHGLDLTAMARDFALAYKRDKATAKELGTEVRALPGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14419; Mature: 14287

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADICCLAMTGKKPDPTEALYVQILIGLLISNGPGSITAQGAKGAVSADGPQTPDRVQIN
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEHH
KAMVGFLTHSGYSHGGNGFEGMAFLLDQFRDKGLKDPTDPNHGLDLTAMARDFALAYKRD
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
KATAKELGTEVRALPGV
CHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
ADICCLAMTGKKPDPTEALYVQILIGLLISNGPGSITAQGAKGAVSADGPQTPDRVQIN
CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEHH
KAMVGFLTHSGYSHGGNGFEGMAFLLDQFRDKGLKDPTDPNHGLDLTAMARDFALAYKRD
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
KATAKELGTEVRALPGV
CHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA