| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is livG [H]
Identifier: 119385777
GI number: 119385777
Start: 235254
End: 236066
Strand: Direct
Name: livG [H]
Synonym: Pden_3055
Alternate gene names: 119385777
Gene position: 235254-236066 (Clockwise)
Preceding gene: 119385776
Following gene: 119385778
Centisome position: 13.6
GC content: 64.45
Gene sequence:
>813_bases ATGTTTCAGGTCAGGGAAACACCTCTCCTGTCCTGCCGGAATGTCACGAAGAAGTTTGGCTCGCTGGCTGCTGTCAGCGA GTTGAGCTTCGACCTTGCCGCCGGTGAGGTCCTTGGCATCGGGGGGCCGAATGGGGCAGGAAAAACCACGCTTTTCGAGA TGATCTCCGGGCAGACCGCTGTCACATCCGGCACGATTGCGCTTGAGGGCCGCGATATCACCGGGCTGTCGCCTGTCGGG CGCTGCCATGCCGGACTGGCCCGGGTGTTTCAGCTAAATACCGGTTTCGACAGTCTGAGCGTGCGCGAGAACGTGCTGGT CGCGGCCTATTACGGCAGGGCCCCGCGCCGGATCCCCGGCTTTCGGGTGCCCTCAGAGGTCAGCGACCAGGTGCAGGATG CGCTGTGCCGCGTGGGCCTCGAGGCAAGCGCGGATCGCGCGGCGGCCAAGCTTCCGGTGATCGACCGCAAGCTGCTGATG ATCGCCGGAGCGCTGGCGATGTCACCGAAACTCCTCTTGTTGGATGAACCCGTCGGCGGGCTGACACAGCGCGAGATCGA CCAGGTGGCCGATGTCGTGGGCCAGGTGGCGGCGGATGGGGTGACGGTCGTTCTGATCGAACATGTCATGCGCTTTCTGG TGCAGCTGTCCACCCGTGTGATGATCCTGCACCATGGCAGGAAGCTTTACGAGGGCGATGCGGCGGGTATTTCCCGCGAC CCGGATGTGGTCGAGGTCTATCTTGGCCAGAGCGCCGGCAAGGATGTCGCGCGCCTCGCCGCAGACCGGACGGAGGCGCG CCATGCCGGATGA
Upstream 100 bases:
>100_bases TCCTGCAGATCCAGGACCATACTGCAGAGCCGGTCCTGATCGCCCCTTGGCCCTATGCAAAGGCCGGTTTCATCACGCCG CCCTGGATCAGGGGGTGAGA
Downstream 100 bases:
>100_bases ACTTGTGATCTCGCATCTGACCGCCGGCTATGGCCATCAGTCTGTCCTCCAGGATCTGAGCTTGCGGGCAGAGGCGGGCC GGCTGACCGCCCTTATCGGG
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MFQVRETPLLSCRNVTKKFGSLAAVSELSFDLAAGEVLGIGGPNGAGKTTLFEMISGQTAVTSGTIALEGRDITGLSPVG RCHAGLARVFQLNTGFDSLSVRENVLVAAYYGRAPRRIPGFRVPSEVSDQVQDALCRVGLEASADRAAAKLPVIDRKLLM IAGALAMSPKLLLLDEPVGGLTQREIDQVADVVGQVAADGVTVVLIEHVMRFLVQLSTRVMILHHGRKLYEGDAAGISRD PDVVEVYLGQSAGKDVARLAADRTEARHAG
Sequences:
>Translated_270_residues MFQVRETPLLSCRNVTKKFGSLAAVSELSFDLAAGEVLGIGGPNGAGKTTLFEMISGQTAVTSGTIALEGRDITGLSPVG RCHAGLARVFQLNTGFDSLSVRENVLVAAYYGRAPRRIPGFRVPSEVSDQVQDALCRVGLEASADRAAAKLPVIDRKLLM IAGALAMSPKLLLLDEPVGGLTQREIDQVADVVGQVAADGVTVVLIEHVMRFLVQLSTRVMILHHGRKLYEGDAAGISRD PDVVEVYLGQSAGKDVARLAADRTEARHAG >Mature_270_residues MFQVRETPLLSCRNVTKKFGSLAAVSELSFDLAAGEVLGIGGPNGAGKTTLFEMISGQTAVTSGTIALEGRDITGLSPVG RCHAGLARVFQLNTGFDSLSVRENVLVAAYYGRAPRRIPGFRVPSEVSDQVQDALCRVGLEASADRAAAKLPVIDRKLLM IAGALAMSPKLLLLDEPVGGLTQREIDQVADVVGQVAADGVTVVLIEHVMRFLVQLSTRVMILHHGRKLYEGDAAGISRD PDVVEVYLGQSAGKDVARLAADRTEARHAG
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=224, Percent_Identity=31.6964285714286, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI153792144, Length=173, Percent_Identity=31.2138728323699, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI27436953, Length=249, Percent_Identity=27.3092369477912, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI27881501, Length=206, Percent_Identity=30.0970873786408, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI30795238, Length=206, Percent_Identity=30.0970873786408, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=30.4761904761905, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI47078218, Length=212, Percent_Identity=28.7735849056604, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI45446740, Length=212, Percent_Identity=28.7735849056604, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI150417984, Length=221, Percent_Identity=28.5067873303167, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI21536376, Length=204, Percent_Identity=28.921568627451, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI116734710, Length=224, Percent_Identity=27.6785714285714, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI27262624, Length=210, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI27262626, Length=210, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI27477115, Length=195, Percent_Identity=26.1538461538462, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=33.7301587301587, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=30.1652892561983, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1790525, Length=247, Percent_Identity=28.7449392712551, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1788210, Length=223, Percent_Identity=29.5964125560538, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=29.7071129707113, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI48995001, Length=221, Percent_Identity=28.5067873303167, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=29.2372881355932, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789991, Length=245, Percent_Identity=28.1632653061224, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1786872, Length=238, Percent_Identity=28.1512605042017, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI87081782, Length=229, Percent_Identity=31.4410480349345, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787370, Length=236, Percent_Identity=28.8135593220339, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082268, Length=249, Percent_Identity=27.710843373494, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1790190, Length=243, Percent_Identity=23.8683127572016, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=28.2157676348548, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=26.9230769230769, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87081834, Length=227, Percent_Identity=26.8722466960352, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788225, Length=244, Percent_Identity=28.2786885245902, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1788761, Length=231, Percent_Identity=29.4372294372294, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787089, Length=226, Percent_Identity=26.9911504424779, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48994943, Length=258, Percent_Identity=27.5193798449612, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788472, Length=256, Percent_Identity=25, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787712, Length=215, Percent_Identity=28.8372093023256, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789672, Length=219, Percent_Identity=25.1141552511416, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788897, Length=233, Percent_Identity=27.4678111587983, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1786563, Length=224, Percent_Identity=31.25, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=27.4261603375527, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787105, Length=248, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788450, Length=253, Percent_Identity=24.901185770751, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788644, Length=249, Percent_Identity=28.9156626506024, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786398, Length=240, Percent_Identity=24.5833333333333, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790467, Length=225, Percent_Identity=27.1111111111111, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790162, Length=229, Percent_Identity=25.764192139738, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=26.9406392694064, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787500, Length=231, Percent_Identity=25.974025974026, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI145693107, Length=254, Percent_Identity=27.9527559055118, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1787972, Length=231, Percent_Identity=26.4069264069264, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786345, Length=239, Percent_Identity=25.9414225941423, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1789586, Length=237, Percent_Identity=26.1603375527426, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI2367384, Length=218, Percent_Identity=29.3577981651376, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789873, Length=224, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786253, Length=225, Percent_Identity=24, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1786319, Length=220, Percent_Identity=26.8181818181818, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787164, Length=222, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1788053, Length=204, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790739, Length=223, Percent_Identity=25.5605381165919, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787547, Length=244, Percent_Identity=24.1803278688525, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115533608, Length=220, Percent_Identity=31.8181818181818, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17510237, Length=224, Percent_Identity=26.7857142857143, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71983523, Length=218, Percent_Identity=27.9816513761468, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71983516, Length=218, Percent_Identity=27.9816513761468, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71983510, Length=218, Percent_Identity=27.9816513761468, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17565586, Length=222, Percent_Identity=24.7747747747748, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI221512771, Length=221, Percent_Identity=28.9592760180996, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24666092, Length=215, Percent_Identity=30.6976744186047, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=30.6666666666667, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI28574150, Length=224, Percent_Identity=29.4642857142857, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI116007328, Length=224, Percent_Identity=29.4642857142857, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI116007184, Length=217, Percent_Identity=29.9539170506912, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=29.9539170506912, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI161076684, Length=211, Percent_Identity=28.436018957346, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581617, Length=211, Percent_Identity=28.436018957346, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581615, Length=211, Percent_Identity=28.436018957346, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI161076682, Length=211, Percent_Identity=28.436018957346, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24648314, Length=224, Percent_Identity=25.8928571428571, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28600; Mature: 28600
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQVRETPLLSCRNVTKKFGSLAAVSELSFDLAAGEVLGIGGPNGAGKTTLFEMISGQTA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCEE VTSGTIALEGRDITGLSPVGRCHAGLARVFQLNTGFDSLSVRENVLVAAYYGRAPRRIPG EECCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC FRVPSEVSDQVQDALCRVGLEASADRAAAKLPVIDRKLLMIAGALAMSPKLLLLDEPVGG CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCC LTQREIDQVADVVGQVAADGVTVVLIEHVMRFLVQLSTRVMILHHGRKLYEGDAAGISRD CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCCCCC PDVVEVYLGQSAGKDVARLAADRTEARHAG CCEEEEEECCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFQVRETPLLSCRNVTKKFGSLAAVSELSFDLAAGEVLGIGGPNGAGKTTLFEMISGQTA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCEE VTSGTIALEGRDITGLSPVGRCHAGLARVFQLNTGFDSLSVRENVLVAAYYGRAPRRIPG EECCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC FRVPSEVSDQVQDALCRVGLEASADRAAAKLPVIDRKLLMIAGALAMSPKLLLLDEPVGG CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCC LTQREIDQVADVVGQVAADGVTVVLIEHVMRFLVQLSTRVMILHHGRKLYEGDAAGISRD CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCCCCC PDVVEVYLGQSAGKDVARLAADRTEARHAG CCEEEEEECCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]