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The map label for this gene is 119385776

Identifier: 119385776

GI number: 119385776

Start: 233971

End: 235251

Strand: Direct

Name: 119385776

Synonym: Pden_3054

Alternate gene names: NA

Gene position: 233971-235251 (Clockwise)

Preceding gene: 119385775

Following gene: 119385777

Centisome position: 13.52

GC content: 62.53

Gene sequence:

>1281_bases
ATGCTTAAAGGGTCGGCCTGGCTGGCCGGGGCTGCCGCAGTCTTGTCGGGCGCGAATGCCGCCCGGGCAGAGGCCTCGGG
CGAGCCGGTCCCCATTGGTCAGGCTGCGCCGCTGACCGATTTCGCCGCCGCTGACGGCGTGGAATTCCGCAACGGGCTGA
TCATGGCCTGCGACGAGATCAACGCGCTTGGCGGCATTCTTGGCCGCCCGCTGGAGCCGCATTTCGAAGACACGAAACAG
ATGGGCGACGCAACCAATGTGCAGGCCGTGCAGCGCCTGATCGACCGCTACGGCGTTCATGCCGTGATCAACGGCTATAA
TACCGGATCGGGGTCTGCAGTGCAGGACGCTATTGCGGATGCCGGCATCATCTATATGCACAATGACACCTCCAGTGGGC
ATGGGGTGCTGATCGGCTCTGACCCGGAGCGCTATTTCGGTTCCTTCCAGACCGATCCGTCGGAAACATGGTATGGCTCG
GGCCTGCTGAAGTTTCTATCCTCCCTGACCGATGGCGGAACATTCGCGCCCGCCAACCGCAAACTGGCGATCATTCTTTC
AGCGGGGACCTATTCCTCGAACATTGCCAATGTGGTGCGAGAGGGCGCGGCGGAGCTTGGCTGGGAGGTCAGCCTCTATG
AGACTGTAAATGTGCCGATTTCGGAATGGGGGCCAACGCTGTCCAAGCTGCGCCAGGACCCGCCCGGCGTGATCGTGGTC
ACGCACTATTTCCCGGCTGATTTGGCGCAGTTCATGGTTCAGTTCATGACCAATCCGACGCCGAGCCTGATCTATATGCA
ATATGGCCCCTCGGTGAAATCCTTCCGCGACATCGCCGGACCGGCCGCCGCAGGGGTAGTCTTCTCGACCGTGATCGGCG
CGCTGCAGGACGAGATCGGCCTTGATTTCGAAGCCCGCTACAAGGCGCGTTTTGGCGATGACGCGGGGCATAATTCCGGG
GTCCAGTCCTATAATGCGGCTTGGATCTGGGCGGCTGCGGCGGCACTCGCCGGTGGCTCCGGTGCCCCGGGGGAGGAGGA
GCAGAACCGCAAAGTGGCCGAACGCATCCGGGCGATGATTCACCGTGGCCCGAACGGCACGACACGTTTCATGCCCGGCG
AGCAGGCTGCGGCCTCTTATCCGGGCGGCACGGATGATCCTTCGCTTGGGATGCCACATCAGTTCCTGCAGATCCAGGAC
CATACTGCAGAGCCGGTCCTGATCGCCCCTTGGCCCTATGCAAAGGCCGGTTTCATCACGCCGCCCTGGATCAGGGGGTG
A

Upstream 100 bases:

>100_bases
GAAGCCGCAAACCCCTGGGCGATGCCTAGGCACAAGATCTAAGCAAAAACCAAACACAACAGGGAGTTACAACATGGGTC
ATCGCATCCATCGGAGAGGC

Downstream 100 bases:

>100_bases
GAATGTTTCAGGTCAGGGAAACACCTCTCCTGTCCTGCCGGAATGTCACGAAGAAGTTTGGCTCGCTGGCTGCTGTCAGC
GAGTTGAGCTTCGACCTTGC

Product: branched-chain amino acid ABC transporter

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Branched-Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLKGSAWLAGAAAVLSGANAARAEASGEPVPIGQAAPLTDFAAADGVEFRNGLIMACDEINALGGILGRPLEPHFEDTKQ
MGDATNVQAVQRLIDRYGVHAVINGYNTGSGSAVQDAIADAGIIYMHNDTSSGHGVLIGSDPERYFGSFQTDPSETWYGS
GLLKFLSSLTDGGTFAPANRKLAIILSAGTYSSNIANVVREGAAELGWEVSLYETVNVPISEWGPTLSKLRQDPPGVIVV
THYFPADLAQFMVQFMTNPTPSLIYMQYGPSVKSFRDIAGPAAAGVVFSTVIGALQDEIGLDFEARYKARFGDDAGHNSG
VQSYNAAWIWAAAAALAGGSGAPGEEEQNRKVAERIRAMIHRGPNGTTRFMPGEQAAASYPGGTDDPSLGMPHQFLQIQD
HTAEPVLIAPWPYAKAGFITPPWIRG

Sequences:

>Translated_426_residues
MLKGSAWLAGAAAVLSGANAARAEASGEPVPIGQAAPLTDFAAADGVEFRNGLIMACDEINALGGILGRPLEPHFEDTKQ
MGDATNVQAVQRLIDRYGVHAVINGYNTGSGSAVQDAIADAGIIYMHNDTSSGHGVLIGSDPERYFGSFQTDPSETWYGS
GLLKFLSSLTDGGTFAPANRKLAIILSAGTYSSNIANVVREGAAELGWEVSLYETVNVPISEWGPTLSKLRQDPPGVIVV
THYFPADLAQFMVQFMTNPTPSLIYMQYGPSVKSFRDIAGPAAAGVVFSTVIGALQDEIGLDFEARYKARFGDDAGHNSG
VQSYNAAWIWAAAAALAGGSGAPGEEEQNRKVAERIRAMIHRGPNGTTRFMPGEQAAASYPGGTDDPSLGMPHQFLQIQD
HTAEPVLIAPWPYAKAGFITPPWIRG
>Mature_426_residues
MLKGSAWLAGAAAVLSGANAARAEASGEPVPIGQAAPLTDFAAADGVEFRNGLIMACDEINALGGILGRPLEPHFEDTKQ
MGDATNVQAVQRLIDRYGVHAVINGYNTGSGSAVQDAIADAGIIYMHNDTSSGHGVLIGSDPERYFGSFQTDPSETWYGS
GLLKFLSSLTDGGTFAPANRKLAIILSAGTYSSNIANVVREGAAELGWEVSLYETVNVPISEWGPTLSKLRQDPPGVIVV
THYFPADLAQFMVQFMTNPTPSLIYMQYGPSVKSFRDIAGPAAAGVVFSTVIGALQDEIGLDFEARYKARFGDDAGHNSG
VQSYNAAWIWAAAAALAGGSGAPGEEEQNRKVAERIRAMIHRGPNGTTRFMPGEQAAASYPGGTDDPSLGMPHQFLQIQD
HTAEPVLIAPWPYAKAGFITPPWIRG

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45015; Mature: 45015

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGSAWLAGAAAVLSGANAARAEASGEPVPIGQAAPLTDFAAADGVEFRNGLIMACDEI
CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEHHH
NALGGILGRPLEPHFEDTKQMGDATNVQAVQRLIDRYGVHAVINGYNTGSGSAVQDAIAD
HHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHC
AGIIYMHNDTSSGHGVLIGSDPERYFGSFQTDPSETWYGSGLLKFLSSLTDGGTFAPANR
CCEEEEECCCCCCCEEEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC
KLAIILSAGTYSSNIANVVREGAAELGWEVSLYETVNVPISEWGPTLSKLRQDPPGVIVV
EEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCHHHCCHHHHHHHCCCCCEEEE
THYFPADLAQFMVQFMTNPTPSLIYMQYGPSVKSFRDIAGPAAAGVVFSTVIGALQDEIG
EECCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
LDFEARYKARFGDDAGHNSGVQSYNAAWIWAAAAALAGGSGAPGEEEQNRKVAERIRAMI
CCEEEEEHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
HRGPNGTTRFMPGEQAAASYPGGTDDPSLGMPHQFLQIQDHTAEPVLIAPWPYAKAGFIT
HCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCEEECCCCCCCCCCCC
PPWIRG
CCCCCC
>Mature Secondary Structure
MLKGSAWLAGAAAVLSGANAARAEASGEPVPIGQAAPLTDFAAADGVEFRNGLIMACDEI
CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEHHH
NALGGILGRPLEPHFEDTKQMGDATNVQAVQRLIDRYGVHAVINGYNTGSGSAVQDAIAD
HHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHC
AGIIYMHNDTSSGHGVLIGSDPERYFGSFQTDPSETWYGSGLLKFLSSLTDGGTFAPANR
CCEEEEECCCCCCCEEEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC
KLAIILSAGTYSSNIANVVREGAAELGWEVSLYETVNVPISEWGPTLSKLRQDPPGVIVV
EEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCHHHCCHHHHHHHCCCCCEEEE
THYFPADLAQFMVQFMTNPTPSLIYMQYGPSVKSFRDIAGPAAAGVVFSTVIGALQDEIG
EECCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
LDFEARYKARFGDDAGHNSGVQSYNAAWIWAAAAALAGGSGAPGEEEQNRKVAERIRAMI
CCEEEEEHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
HRGPNGTTRFMPGEQAAASYPGGTDDPSLGMPHQFLQIQDHTAEPVLIAPWPYAKAGFIT
HCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCEEECCCCCCCCCCCC
PPWIRG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA