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The map label for this gene is 119385757

Identifier: 119385757

GI number: 119385757

Start: 209564

End: 210601

Strand: Direct

Name: 119385757

Synonym: Pden_3033

Alternate gene names: NA

Gene position: 209564-210601 (Clockwise)

Preceding gene: 119385756

Following gene: 119385758

Centisome position: 12.11

GC content: 62.52

Gene sequence:

>1038_bases
ATGTTCCGGATCCGGCATCTGGCCACGTGCATCGCCTGTGCAGTTGCCCTTCTGTCCCAACCCGCATCGGCCGAGATCAT
GCGCGAGGTGGTCTATTACGGCGACCGATCCGTCAGCCTGCCGCCCGAGATCGATCGGATCGCCACGAATTGGGAGGCGC
AGAACTCGATCCTGACCATGCTCGGCTATGGCGACCGCATCGTCGCGACCACGCGCATCGCGCGCTCGATGCCGCTGATG
CAAAAGTTCGTGCCCTCGATCAAGGCTGCGGCGCTGACCACGCTCGGCGACGGCACCGTCAATGTCGAGGAGCTGATGGT
GCTGAAGCCGGACATCCTGTTTTCCTCGCGTGCGTTACCCGACGCTGTTTCCAGGCAGCTTCGGGGGGCGGGCATCGCCG
TGGCGTCCTTTCGCAGCAATTCCATCGACGCGCTGGTCGAGCGCGTGTTGATCACCGGCGAAATGCTTGGGCCGGATGCG
CTTGAAGTCGCCAGGAGGTACCAAGGCTATTTCGACGACAACCGCCGCCGCGTCGCCGAGCGGCTGGAAGGCATCCCGCC
CGATCGGCGCGTGAGGGTCTACCTGGCCTCGGGCGCGCCGCTTTCGACCTCGGGACGACCGTCGCTGAACCAGGACTGGA
TGGATCTGGGCGGGGCGATCAATATCGCGGAAAGCTGGTTCGGAGACATGCCCTATGCCTCGGGCATTGCCTCGCTTGAG
AATATCATCGCCGGAAACCCTGATGTCATCATCTCGATGAATGCCGAGGACGCCGAGGAAATCCGCACCAACCCGCAATG
GCGCAACGTCAAGGCGGTGCGCGAGGGCCGGGTCTACGCCAATCCGCGCGGGCTGTTCTGGTGGTGCCGGGAAACCTCGG
AAGGGGCGCTTCAATTTCTTTGGCTGGCCAGCACGCTTTATCCCGACGCTCTTGCCGATATCGACATGCGCGAGGAAACC
CGGCGTTTCTATCGCAAATTCTATCGCATCGAACTGACCGACAACGAGATCGCCGAGTTCCTGAAGCCGACATACTGA

Upstream 100 bases:

>100_bases
GTCCTCACGCCGCAGGTCATCCACGCGGTCTATGGGGTCCGGGTCGCCCGGGTCGGTCACGGTCCCCACATTATTTTTGT
CCCGGCATGAGGAGAGGATG

Downstream 100 bases:

>100_bases
CGCAGCAGTCCGGGATGATCATAGAGACAGCAGCGATGAATTCGCGGACCTTTGAACCAAGCTTCTTTCGAAGTGGATGC
CTTGGTCGGTGGCGCAATCT

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MFRIRHLATCIACAVALLSQPASAEIMREVVYYGDRSVSLPPEIDRIATNWEAQNSILTMLGYGDRIVATTRIARSMPLM
QKFVPSIKAAALTTLGDGTVNVEELMVLKPDILFSSRALPDAVSRQLRGAGIAVASFRSNSIDALVERVLITGEMLGPDA
LEVARRYQGYFDDNRRRVAERLEGIPPDRRVRVYLASGAPLSTSGRPSLNQDWMDLGGAINIAESWFGDMPYASGIASLE
NIIAGNPDVIISMNAEDAEEIRTNPQWRNVKAVREGRVYANPRGLFWWCRETSEGALQFLWLASTLYPDALADIDMREET
RRFYRKFYRIELTDNEIAEFLKPTY

Sequences:

>Translated_345_residues
MFRIRHLATCIACAVALLSQPASAEIMREVVYYGDRSVSLPPEIDRIATNWEAQNSILTMLGYGDRIVATTRIARSMPLM
QKFVPSIKAAALTTLGDGTVNVEELMVLKPDILFSSRALPDAVSRQLRGAGIAVASFRSNSIDALVERVLITGEMLGPDA
LEVARRYQGYFDDNRRRVAERLEGIPPDRRVRVYLASGAPLSTSGRPSLNQDWMDLGGAINIAESWFGDMPYASGIASLE
NIIAGNPDVIISMNAEDAEEIRTNPQWRNVKAVREGRVYANPRGLFWWCRETSEGALQFLWLASTLYPDALADIDMREET
RRFYRKFYRIELTDNEIAEFLKPTY
>Mature_345_residues
MFRIRHLATCIACAVALLSQPASAEIMREVVYYGDRSVSLPPEIDRIATNWEAQNSILTMLGYGDRIVATTRIARSMPLM
QKFVPSIKAAALTTLGDGTVNVEELMVLKPDILFSSRALPDAVSRQLRGAGIAVASFRSNSIDALVERVLITGEMLGPDA
LEVARRYQGYFDDNRRRVAERLEGIPPDRRVRVYLASGAPLSTSGRPSLNQDWMDLGGAINIAESWFGDMPYASGIASLE
NIIAGNPDVIISMNAEDAEEIRTNPQWRNVKAVREGRVYANPRGLFWWCRETSEGALQFLWLASTLYPDALADIDMREET
RRFYRKFYRIELTDNEIAEFLKPTY

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 38691; Mature: 38691

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRIRHLATCIACAVALLSQPASAEIMREVVYYGDRSVSLPPEIDRIATNWEAQNSILTM
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEE
LGYGDRIVATTRIARSMPLMQKFVPSIKAAALTTLGDGTVNVEELMVLKPDILFSSRALP
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCHHHCCCCCC
DAVSRQLRGAGIAVASFRSNSIDALVERVLITGEMLGPDALEVARRYQGYFDDNRRRVAE
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH
RLEGIPPDRRVRVYLASGAPLSTSGRPSLNQDWMDLGGAINIAESWFGDMPYASGIASLE
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEHHHHHCCCCCHHHHHHHHH
NIIAGNPDVIISMNAEDAEEIRTNPQWRNVKAVREGRVYANPRGLFWWCRETSEGALQFL
HHHCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHCCCEEECCCCEEEEEECCCCHHHHHH
WLASTLYPDALADIDMREETRRFYRKFYRIELTDNEIAEFLKPTY
HHHHHHCCHHHHCCCCHHHHHHHHHHHHEEEECHHHHHHHHCCCC
>Mature Secondary Structure
MFRIRHLATCIACAVALLSQPASAEIMREVVYYGDRSVSLPPEIDRIATNWEAQNSILTM
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEE
LGYGDRIVATTRIARSMPLMQKFVPSIKAAALTTLGDGTVNVEELMVLKPDILFSSRALP
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCHHHCCCCCC
DAVSRQLRGAGIAVASFRSNSIDALVERVLITGEMLGPDALEVARRYQGYFDDNRRRVAE
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH
RLEGIPPDRRVRVYLASGAPLSTSGRPSLNQDWMDLGGAINIAESWFGDMPYASGIASLE
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEHHHHHCCCCCHHHHHHHHH
NIIAGNPDVIISMNAEDAEEIRTNPQWRNVKAVREGRVYANPRGLFWWCRETSEGALQFL
HHHCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHCCCEEECCCCEEEEEECCCCHHHHHH
WLASTLYPDALADIDMREETRRFYRKFYRIELTDNEIAEFLKPTY
HHHHHHCCHHHHCCCCHHHHHHHHHHHHEEEECHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]