| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is moxJ
Identifier: 119385718
GI number: 119385718
Start: 168805
End: 169635
Strand: Direct
Name: moxJ
Synonym: Pden_2994
Alternate gene names: 119385718
Gene position: 168805-169635 (Clockwise)
Preceding gene: 119385717
Following gene: 119385719
Centisome position: 9.76
GC content: 63.18
Gene sequence:
>831_bases ATGCTCATTGATTTCCGCCAGGTTTGCGGCGCGGGGGCGGCGGCCCTGGCCCTTGCCTCGCCCGCTCTGGCAGACACGAC GAACCTGCGCGTCTGCGCCTCGACCAAGGACGCGCCCTTCTCGGACGCGCAGGGCGCCGGCTTTGAAAACAAGATCGCCC AAGTGCTGGCCGACGAGATGGGCGCCACGCTTGATCTGGTGATGCTGGAAAAAGACGCGATCTATCTGGTCCGCGACGGC ATCGAAAAGGATCTGTGCGACGTTCTGGTCGGCGTGGATGCGGGCGACGAGCGGCTGCTGACCACCCGGCCCTATTACCG CTCGGGCTATGCCTTCGTCACGCGGCAGGACCGCAACTTCGAGGGCGACAAGTGGCAGGACGTGGATCAGGAGGGGTTCG ACACCTTCTCGTATCGCCTGCATTCCCCGGCCGAGACGATCCTGAAATATACCGGCCGCTACGAATACAACCTGATCTAC CAGGCCTCGCTGACCAATTTCGAGGACCGGCGAAACAAATACACCCAGGTCGAGGCCAGCCGCGTCATCACGGAGGTCGC GGATGGCGGGGCCGATCTGGCCATCGTCTTCGCCCCCGAGGCGGCGCGCTATGTCCGCGACTCGCGCGAGCCCTTGCGTA TGACCCTGATTACCAATGAAATCGAACGCTCGGACGGCGTCATCATCCCGCTGCAATATTCGCAGTCCGTGGGCGTGTCC AAGACCCATCCCGAGCTTCTGGGGCCGATCGAACAGGCCCTGCAATCCGGCAAAGCCAGGATTGATGCCATCCTGACCGA GGAAGGCATCCCCCTGCTGCCGTCAAGCTGA
Upstream 100 bases:
>100_bases GAATACGCGCCGGGTGAGCCCACCTGACGCGGCGGGCCGGCCCGCCCTTCCTTCCCGGCGGGCCGGCCTGCGTGACCCTA TTCAGTCTGGAGAAACCGAA
Downstream 100 bases:
>100_bases AGGAAATGGAATGACGAAGCCCAGGATCCTTGCCGCATTCGCAATGACCCTCATCATCCCGGTCGCGGCAATGGCGGCCC CGCAGTTCTTCAACATCATC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLIDFRQVCGAGAAALALASPALADTTNLRVCASTKDAPFSDAQGAGFENKIAQVLADEMGATLDLVMLEKDAIYLVRDG IEKDLCDVLVGVDAGDERLLTTRPYYRSGYAFVTRQDRNFEGDKWQDVDQEGFDTFSYRLHSPAETILKYTGRYEYNLIY QASLTNFEDRRNKYTQVEASRVITEVADGGADLAIVFAPEAARYVRDSREPLRMTLITNEIERSDGVIIPLQYSQSVGVS KTHPELLGPIEQALQSGKARIDAILTEEGIPLLPSS
Sequences:
>Translated_276_residues MLIDFRQVCGAGAAALALASPALADTTNLRVCASTKDAPFSDAQGAGFENKIAQVLADEMGATLDLVMLEKDAIYLVRDG IEKDLCDVLVGVDAGDERLLTTRPYYRSGYAFVTRQDRNFEGDKWQDVDQEGFDTFSYRLHSPAETILKYTGRYEYNLIY QASLTNFEDRRNKYTQVEASRVITEVADGGADLAIVFAPEAARYVRDSREPLRMTLITNEIERSDGVIIPLQYSQSVGVS KTHPELLGPIEQALQSGKARIDAILTEEGIPLLPSS >Mature_276_residues MLIDFRQVCGAGAAALALASPALADTTNLRVCASTKDAPFSDAQGAGFENKIAQVLADEMGATLDLVMLEKDAIYLVRDG IEKDLCDVLVGVDAGDERLLTTRPYYRSGYAFVTRQDRNFEGDKWQDVDQEGFDTFSYRLHSPAETILKYTGRYEYNLIY QASLTNFEDRRNKYTQVEASRVITEVADGGADLAIVFAPEAARYVRDSREPLRMTLITNEIERSDGVIIPLQYSQSVGVS KTHPELLGPIEQALQSGKARIDAILTEEGIPLLPSS
Specific function: May be involved in the assemblage of active methanol dehydrogenase and/or its cofactor PQQ in the periplasm
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MOXJ_PARDE (P29900)
Other databases:
- EMBL: M57684 - PIR: A41377 - ProteinModelPortal: P29900 - InterPro: IPR022455 - InterPro: IPR001638 - SMART: SM00062 - TIGRFAMs: TIGR03870
Pfam domain/function: PF00497 SBP_bac_3
EC number: NA
Molecular weight: Translated: 30443; Mature: 30443
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDFRQVCGAGAAALALASPALADTTNLRVCASTKDAPFSDAQGAGFENKIAQVLADEM CEECHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GATLDLVMLEKDAIYLVRDGIEKDLCDVLVGVDAGDERLLTTRPYYRSGYAFVTRQDRNF CCEEEEEEECCCEEEEECCCCHHHHHHHEECCCCCCCCEEEECCCHHCCEEEEEECCCCC EGDKWQDVDQEGFDTFSYRLHSPAETILKYTGRYEYNLIYQASLTNFEDRRNKYTQVEAS CCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHH RVITEVADGGADLAIVFAPEAARYVRDSREPLRMTLITNEIERSDGVIIPLQYSQSVGVS HHHHHHHCCCCCEEEEECCHHHHHHHCCCCCEEEEEEEHHHHCCCCEEEEEECCCCCCCC KTHPELLGPIEQALQSGKARIDAILTEEGIPLLPSS CCCHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCC >Mature Secondary Structure MLIDFRQVCGAGAAALALASPALADTTNLRVCASTKDAPFSDAQGAGFENKIAQVLADEM CEECHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GATLDLVMLEKDAIYLVRDGIEKDLCDVLVGVDAGDERLLTTRPYYRSGYAFVTRQDRNF CCEEEEEEECCCEEEEECCCCHHHHHHHEECCCCCCCCEEEECCCHHCCEEEEEECCCCC EGDKWQDVDQEGFDTFSYRLHSPAETILKYTGRYEYNLIYQASLTNFEDRRNKYTQVEAS CCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHH RVITEVADGGADLAIVFAPEAARYVRDSREPLRMTLITNEIERSDGVIIPLQYSQSVGVS HHHHHHHCCCCCEEEEECCHHHHHHHCCCCCEEEEEEEHHHHCCCCEEEEEECCCCCCCC KTHPELLGPIEQALQSGKARIDAILTEEGIPLLPSS CCCHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1657871; 2505667