| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385606
Identifier: 119385606
GI number: 119385606
Start: 45545
End: 45901
Strand: Direct
Name: 119385606
Synonym: Pden_2881
Alternate gene names: NA
Gene position: 45545-45901 (Clockwise)
Preceding gene: 119385600
Following gene: 119385608
Centisome position: 2.63
GC content: 68.07
Gene sequence:
>357_bases ATGCCCGCACAGCAACCCAGCCTGGACGCCATTTTCTCCGCCCTCGCCGATCCGACGCGGCGAGCGATCCTTGGCATGCT GCTCGAGGACGACATGGCGGTGACGGATGTGGCAGCACCGTTCGAGATGAGCCTGGCGGCGATCTCCAAGCACCTCGCCG TGCTGGCGGCCGCCGGGCTGATCCGGCAAGAGCGGCGCGGCCGCATCATCTGGTGCAAGCTGGAGCCGGACGGGCTGCGC AACGCTTCGGTCTGGATGCAGGGCTTCGGCCAGTTCGAGCCGGTGGATCTGGACGATTTCGAACGCTTCCTGCGCGAAGC CCTGCCGCTGGCGGATGGCGACGACGCCCAGCCGTGA
Upstream 100 bases:
>100_bases AAAAACAATGATTCCCTGAAAGCCGCGTCCCGTTGGAAACCCGGCCTTGCGGTCCGGCGGGCATCCGTCCCATATTCAAC CGGCAAGTTAAGCAAAGCCG
Downstream 100 bases:
>100_bases ATTCGCGCAACGCGGCGCCGAAACGCGAAAAGGGCCGGGCATGTGCCCGGCCCCTTGCGTTCCTGTCATTTCACGGTGAT GCGGCCATCCAGCTTCGGCG
Product: regulatory protein, ArsR
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator Arsr Family; ArsR Family Regulatory; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; ArsR Family Transcriptional Regulatory Protein; HTH Family Transcriptional Regulator; Arsenical Resistance Operon Repressor; Transcriptional Regulatory Protein; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator Arsr Domain Protein; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Xin-Antitoxin System Antitoxin Component ArsR Family
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MPAQQPSLDAIFSALADPTRRAILGMLLEDDMAVTDVAAPFEMSLAAISKHLAVLAAAGLIRQERRGRIIWCKLEPDGLR NASVWMQGFGQFEPVDLDDFERFLREALPLADGDDAQP
Sequences:
>Translated_118_residues MPAQQPSLDAIFSALADPTRRAILGMLLEDDMAVTDVAAPFEMSLAAISKHLAVLAAAGLIRQERRGRIIWCKLEPDGLR NASVWMQGFGQFEPVDLDDFERFLREALPLADGDDAQP >Mature_117_residues PAQQPSLDAIFSALADPTRRAILGMLLEDDMAVTDVAAPFEMSLAAISKHLAVLAAAGLIRQERRGRIIWCKLEPDGLRN ASVWMQGFGQFEPVDLDDFERFLREALPLADGDDAQP
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12965; Mature: 12834
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQQPSLDAIFSALADPTRRAILGMLLEDDMAVTDVAAPFEMSLAAISKHLAVLAAAGL CCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH IRQERRGRIIWCKLEPDGLRNASVWMQGFGQFEPVDLDDFERFLREALPLADGDDAQP HHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PAQQPSLDAIFSALADPTRRAILGMLLEDDMAVTDVAAPFEMSLAAISKHLAVLAAAGL CCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH IRQERRGRIIWCKLEPDGLRNASVWMQGFGQFEPVDLDDFERFLREALPLADGDDAQP HHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA