| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385570
Identifier: 119385570
GI number: 119385570
Start: 12258
End: 13637
Strand: Direct
Name: 119385570
Synonym: Pden_2845
Alternate gene names: NA
Gene position: 12258-13637 (Clockwise)
Preceding gene: 119385569
Following gene: 119385577
Centisome position: 0.71
GC content: 65.94
Gene sequence:
>1380_bases ATGTCCATTCCCCAACAGGGCGGCGGCCCGATCGAACGTCCCGAACAACTGGCCGAATATCTCGCCTCGGGTGAAAAACC GCGCGAGAGCTGGCGGATCGGCACCGAGCACGAGAAATTCGGCTATCGCCATGCCGACCTGATGCCCCTGCCCTATGAGG CGCCCGCCGGCCAGCCCTCGGTCAAGGCCATGCTGGAGGGGTTGCAGGCCCGTTTCGGCTGGACCCCGGTGCTGGAGGCC GGCCATATCATCGGGCTGGAACGCGACGGCGCCAATGTCAGCCTGGAGCCCGGCGGACAGCTAGAACTCTCCGGCGCGCC GCTGGAGACCATCCACCAGACCTGCGACGAGGTGAACAGCCATCTGGCCGAGGTGAAGGCCGTGGCGGACGATCTTGGCG CGGGCTTCATCGGCCTTGGCGCGGCGCCGATCTGGACGCAGGACCAGATGCCGATGATGCCGAAAGGCCGCTATCGGCTG ATGACCGACTACATGGGTCGGGTCGGCACGCTGGGCACGCAGATGATGTATCGCACCTGCACGGTGCAGGTGAACCTGGA CTTCGCCAGCGAAGCCGACATGGTGCAGAAGCTGCGCGTGGCGCTGGCCCTGCAGCCGGTGGCGAATGCGCTGTTCGCCA ATTCGCCCTTCCTCGACGGCAAGCCGAACGGCTGGAAAAGCTGGCGGGCGCATATCTGGCAGAACCTCGACGCGGCCCGC ACCGGCATGCTGCCCTTTGCCTTCGAGGACGGCTTCGGCTACGAGCGTTGGGTCGATTACGTCCTCGATGTGCCGATGTA TTTCGTCTATCGCGACGGCAAGTATATCGACGCGTTGGGACAAAGCTTCCGCGATTTCCTGAACGGCCGCTTGCCGGCGC TGCCGGGCGAAATCCCGACCCTGTCGGATTGGGCCGACCACCTGACCACGGTTTTCCCCGAGGCGCGGGTCAAGAAATTC ATCGAGATGCGCGGTGCGGACGGCGGTCCCTGGCGGCGGCTCTGCGCCCTGCCGGCGCTGTGGGTCGGGCTGCTTTACGA CCAGGCGGCACAGGATGCGGCCTGGGATCTGGTCAAGGGCTGGGATGCCGAGACGCGCGAGTCCTGGCGGCGCGGTGCCG GGCTCAAGGCGCTGGATGCCGAGGTGAACGGCACGAAGATGCGCGACCTGGCGCGCGAGGTGCTGGCGATTTCGGAAGCC GGGCTCAAGGCGCGTGCCCGCACCGGATCGGGCGGGCTGGTGCCGGACGAGACGCATTTCCTGAACACGCTGAAGGAAAG CGTCGAGACCGGCAAGGTTCCCGCCGACGAGTTGCTGGGGAAATACCACGGCGAATGGGCGGGCGATCTCAGCCGCATCT ACGCCGAATATTCCTATTGA
Upstream 100 bases:
>100_bases CCGACGATCCAGACCGTTTGGACGAGGCCGGCGCGCGCCCGCTTGACTTGAGCCGCGCGCCTTGCCACCTGTGACGGGCA AGGCAAATGAAAGGCCACCG
Downstream 100 bases:
>100_bases CCAAGGGCCGGGTAATCCCCGGCCCCTTTCGCATCCGGCCTGCGTCGCAAATTCAGGCTTGCGGCGCCGACGGTTCGTTG CGGTTTTGCATGAACTGGTC
Product: glutamate--cysteine ligase
Products: ADP; phosphate; gamma-L-glutamyl-L-cysteine
Alternate protein names: Glutamate/Cysteine Ligase; Gamma-Glutamylcysteine Synthetase; Glutamate/Cysteine Ligase Family Protein; Glutamate-Cysteine Ligase GshA; Glutamylcysteine Synthetase; Glutamate-Cysteine Ligase Family 2 Protein; Glutamate-Cysteine Ligase Protein; Glutathione Synthetase; Glutamate-Cysteine Ligase Gsha; Glutamate-Cysteine Ligase Protein; Glutamate-Cysteine Ligase Family Protein; Glutamate Cystein Ligase Protein; Glutamate-Cysteine Ligase GSHA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSIPQQGGGPIERPEQLAEYLASGEKPRESWRIGTEHEKFGYRHADLMPLPYEAPAGQPSVKAMLEGLQARFGWTPVLEA GHIIGLERDGANVSLEPGGQLELSGAPLETIHQTCDEVNSHLAEVKAVADDLGAGFIGLGAAPIWTQDQMPMMPKGRYRL MTDYMGRVGTLGTQMMYRTCTVQVNLDFASEADMVQKLRVALALQPVANALFANSPFLDGKPNGWKSWRAHIWQNLDAAR TGMLPFAFEDGFGYERWVDYVLDVPMYFVYRDGKYIDALGQSFRDFLNGRLPALPGEIPTLSDWADHLTTVFPEARVKKF IEMRGADGGPWRRLCALPALWVGLLYDQAAQDAAWDLVKGWDAETRESWRRGAGLKALDAEVNGTKMRDLAREVLAISEA GLKARARTGSGGLVPDETHFLNTLKESVETGKVPADELLGKYHGEWAGDLSRIYAEYSY
Sequences:
>Translated_459_residues MSIPQQGGGPIERPEQLAEYLASGEKPRESWRIGTEHEKFGYRHADLMPLPYEAPAGQPSVKAMLEGLQARFGWTPVLEA GHIIGLERDGANVSLEPGGQLELSGAPLETIHQTCDEVNSHLAEVKAVADDLGAGFIGLGAAPIWTQDQMPMMPKGRYRL MTDYMGRVGTLGTQMMYRTCTVQVNLDFASEADMVQKLRVALALQPVANALFANSPFLDGKPNGWKSWRAHIWQNLDAAR TGMLPFAFEDGFGYERWVDYVLDVPMYFVYRDGKYIDALGQSFRDFLNGRLPALPGEIPTLSDWADHLTTVFPEARVKKF IEMRGADGGPWRRLCALPALWVGLLYDQAAQDAAWDLVKGWDAETRESWRRGAGLKALDAEVNGTKMRDLAREVLAISEA GLKARARTGSGGLVPDETHFLNTLKESVETGKVPADELLGKYHGEWAGDLSRIYAEYSY >Mature_458_residues SIPQQGGGPIERPEQLAEYLASGEKPRESWRIGTEHEKFGYRHADLMPLPYEAPAGQPSVKAMLEGLQARFGWTPVLEAG HIIGLERDGANVSLEPGGQLELSGAPLETIHQTCDEVNSHLAEVKAVADDLGAGFIGLGAAPIWTQDQMPMMPKGRYRLM TDYMGRVGTLGTQMMYRTCTVQVNLDFASEADMVQKLRVALALQPVANALFANSPFLDGKPNGWKSWRAHIWQNLDAART GMLPFAFEDGFGYERWVDYVLDVPMYFVYRDGKYIDALGQSFRDFLNGRLPALPGEIPTLSDWADHLTTVFPEARVKKFI EMRGADGGPWRRLCALPALWVGLLYDQAAQDAAWDLVKGWDAETRESWRRGAGLKALDAEVNGTKMRDLAREVLAISEAG LKARARTGSGGLVPDETHFLNTLKESVETGKVPADELLGKYHGEWAGDLSRIYAEYSY
Specific function: Unknown
COG id: COG3572
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.2.2
Molecular weight: Translated: 50821; Mature: 50690
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPQQGGGPIERPEQLAEYLASGEKPRESWRIGTEHEKFGYRHADLMPLPYEAPAGQPS CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHH VKAMLEGLQARFGWTPVLEAGHIIGLERDGANVSLEPGGQLELSGAPLETIHQTCDEVNS HHHHHHHHHHHCCCCHHHCCCCEEEEECCCCEEEECCCCEEEECCCCHHHHHHHHHHHHH HLAEVKAVADDLGAGFIGLGAAPIWTQDQMPMMPKGRYRLMTDYMGRVGTLGTQMMYRTC HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEE TVQVNLDFASEADMVQKLRVALALQPVANALFANSPFLDGKPNGWKSWRAHIWQNLDAAR EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHH TGMLPFAFEDGFGYERWVDYVLDVPMYFVYRDGKYIDALGQSFRDFLNGRLPALPGEIPT HCCCCEEECCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC LSDWADHLTTVFPEARVKKFIEMRGADGGPWRRLCALPALWVGLLYDQAAQDAAWDLVKG HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WDAETRESWRRGAGLKALDAEVNGTKMRDLAREVLAISEAGLKARARTGSGGLVPDETHF CCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHH LNTLKESVETGKVPADELLGKYHGEWAGDLSRIYAEYSY HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure SIPQQGGGPIERPEQLAEYLASGEKPRESWRIGTEHEKFGYRHADLMPLPYEAPAGQPS CCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHH VKAMLEGLQARFGWTPVLEAGHIIGLERDGANVSLEPGGQLELSGAPLETIHQTCDEVNS HHHHHHHHHHHCCCCHHHCCCCEEEEECCCCEEEECCCCEEEECCCCHHHHHHHHHHHHH HLAEVKAVADDLGAGFIGLGAAPIWTQDQMPMMPKGRYRLMTDYMGRVGTLGTQMMYRTC HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEE TVQVNLDFASEADMVQKLRVALALQPVANALFANSPFLDGKPNGWKSWRAHIWQNLDAAR EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHH TGMLPFAFEDGFGYERWVDYVLDVPMYFVYRDGKYIDALGQSFRDFLNGRLPALPGEIPT HCCCCEEECCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC LSDWADHLTTVFPEARVKKFIEMRGADGGPWRRLCALPALWVGLLYDQAAQDAAWDLVKG HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WDAETRESWRRGAGLKALDAEVNGTKMRDLAREVLAISEAGLKARARTGSGGLVPDETHF CCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHH LNTLKESVETGKVPADELLGKYHGEWAGDLSRIYAEYSY HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate; L-cysteine
Specific reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA