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The map label for this gene is rnpA

Identifier: 119358506

GI number: 119358506

Start: 3132766

End: 3133206

Strand: Reverse

Name: rnpA

Synonym: Cpha266_2742

Alternate gene names: 119358506

Gene position: 3133206-3132766 (Counterclockwise)

Preceding gene: 119358507

Following gene: 119358505

Centisome position: 99.98

GC content: 46.71

Gene sequence:

>441_bases
GTGCATCATGAGGTAATGAGCGGCCTTCATGTCAATTCCCTGCGCAAGCATGAGATCCTCCGCAAAGAACAACTCATTGC
AGCGTTGTTCGTGAGCGGCAAAAGCTGCAAGGGCGAATATTTGAAGTTATTTTACCAGAAGACCGTTTCGGACGTGAAGA
GTCGTTCGCCCGCGGTACAGGTTCTTTTTGCCGTCAGTAAAAAAAACGTGCCTCATGCCGTGTCGCGAAACAGACTGAAA
CGATTGATGCGAGAGGCATATCGTAACGAAAAACAGCAACTGTTCACTTTGTGTGATGAAGGCCGGCCTGAAATGAGCGG
GATCCATCTGCAAATAGCGGTACTGTATATCGGAGGGAGAAAATCTTTTCCCTCATTTGAGCTCTTAAGGCAGGAAATAA
GTCGATTAATGCATAATATCAGACTATCCGAACTCACCTGA

Upstream 100 bases:

>100_bases
AAAGGGCGCCACTCTCTTTCCGTAAGCAGCGCTATGGGTACGGCTGGACAGTAGCCTGTCGGCAACAAGTTTCGGGTGTG
TCGAATCAGTTGAAAACCAT

Downstream 100 bases:

>100_bases
ACGGTTTTGATTGTGAAGAAGAGATGAAAAAAGATGAGCAACGGCTTTCTCCCGCACCGTTATGACGTTTTCGAGAAAGC
TATTCAATGCAGTTCCGATT

Product: ribonuclease P

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MHHEVMSGLHVNSLRKHEILRKEQLIAALFVSGKSCKGEYLKLFYQKTVSDVKSRSPAVQVLFAVSKKNVPHAVSRNRLK
RLMREAYRNEKQQLFTLCDEGRPEMSGIHLQIAVLYIGGRKSFPSFELLRQEISRLMHNIRLSELT

Sequences:

>Translated_146_residues
MHHEVMSGLHVNSLRKHEILRKEQLIAALFVSGKSCKGEYLKLFYQKTVSDVKSRSPAVQVLFAVSKKNVPHAVSRNRLK
RLMREAYRNEKQQLFTLCDEGRPEMSGIHLQIAVLYIGGRKSFPSFELLRQEISRLMHNIRLSELT
>Mature_146_residues
MHHEVMSGLHVNSLRKHEILRKEQLIAALFVSGKSCKGEYLKLFYQKTVSDVKSRSPAVQVLFAVSKKNVPHAVSRNRLK
RLMREAYRNEKQQLFTLCDEGRPEMSGIHLQIAVLYIGGRKSFPSFELLRQEISRLMHNIRLSELT

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNPA_CHLPD (A1BJZ9)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_913150.1
- STRING:   A1BJZ9
- GeneID:   4569986
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_2742
- NMPDR:   fig|290317.7.peg.2862
- eggNOG:   NOG41814
- HOGENOM:   HBG405599
- OMA:   KHEILRK
- ProtClustDB:   PRK01903
- HAMAP:   MF_00227
- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- InterPro:   IPR020539
- Gene3D:   G3DSA:3.30.230.10
- ProDom:   PD003629
- TIGRFAMs:   TIGR00188

Pfam domain/function: PF00825 Ribonuclease_P; SSF54211 Ribosomal_S5_D2-typ_fold

EC number: =3.1.26.5

Molecular weight: Translated: 16903; Mature: 16903

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHEVMSGLHVNSLRKHEILRKEQLIAALFVSGKSCKGEYLKLFYQKTVSDVKSRSPAVQ
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VLFAVSKKNVPHAVSRNRLKRLMREAYRNEKQQLFTLCDEGRPEMSGIHLQIAVLYIGGR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCC
KSFPSFELLRQEISRLMHNIRLSELT
CCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHHEVMSGLHVNSLRKHEILRKEQLIAALFVSGKSCKGEYLKLFYQKTVSDVKSRSPAVQ
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VLFAVSKKNVPHAVSRNRLKRLMREAYRNEKQQLFTLCDEGRPEMSGIHLQIAVLYIGGR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCC
KSFPSFELLRQEISRLMHNIRLSELT
CCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA