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The map label for this gene is atpF

Identifier: 119358471

GI number: 119358471

Start: 3098817

End: 3099344

Strand: Reverse

Name: atpF

Synonym: Cpha266_2707

Alternate gene names: 119358471

Gene position: 3099344-3098817 (Counterclockwise)

Preceding gene: 119358472

Following gene: 119358470

Centisome position: 98.9

GC content: 47.54

Gene sequence:

>528_bases
ATGTTAACATCGGGAGTCATACTTCTCAATGGCGGACTTCTCAGCCCAAATCCGGGTCTTATTTTCTGGACCACCGTGTC
GTTTGTCATTGTCCTGCTCATCCTCAGGAAGCTTGCATGGGGGCCGATCATTTCTGCATTGGAAGAAAGAGAAAAAGGCA
TACAGTCATCAATTGACCGCGCGCACAAAGCCAAAGACGAGGCTGAAGAAATTCTTCGCAAAAACAGGGAGCTGCTTGCA
AAGGCAGATGCCGAGTCCGACAAGATAATCCGTGAAGGAAAAGAGTATGGCGAAAAGCTCAGGGCGGGAATTGCCGAAAA
AGCCCAGGCTGAAGCTGCAAAAATGATCTCGATGGCCAAAGAAGAAATCGAGCAGGAAAAACGCAGGGCGCTTGATGTTC
TGAGAAACGAGGTTGCCGAACTGGCCGTCATGGGAGCTGAAAAAATCATTAAAACCTCTCTTGATGCCGACATGCAGAAA
AAAATTGTCGACAGCATGATTCAGGATCTTTCAACGAAACGTAACTGA

Upstream 100 bases:

>100_bases
AATAGCGCACAGCCTCATAACAGAAGATATTCCGATTGCGAAACGATTAACGCAATCATTCGCAGTCGGATTTTATTAAC
CCGTTAAAAGAACAGTGTTC

Downstream 100 bases:

>100_bases
AAAAGGTCAGGACATGTCAAGTGTTATAGCAAGTCGGCGTTATGCCTCAGCCTTATTGTCTGCAGCCGAAGAGGGAGGAT
TTCTTGATCAGGCGACTCAG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLTSGVILLNGGLLSPNPGLIFWTTVSFVIVLLILRKLAWGPIISALEEREKGIQSSIDRAHKAKDEAEEILRKNRELLA
KADAESDKIIREGKEYGEKLRAGIAEKAQAEAAKMISMAKEEIEQEKRRALDVLRNEVAELAVMGAEKIIKTSLDADMQK
KIVDSMIQDLSTKRN

Sequences:

>Translated_175_residues
MLTSGVILLNGGLLSPNPGLIFWTTVSFVIVLLILRKLAWGPIISALEEREKGIQSSIDRAHKAKDEAEEILRKNRELLA
KADAESDKIIREGKEYGEKLRAGIAEKAQAEAAKMISMAKEEIEQEKRRALDVLRNEVAELAVMGAEKIIKTSLDADMQK
KIVDSMIQDLSTKRN
>Mature_175_residues
MLTSGVILLNGGLLSPNPGLIFWTTVSFVIVLLILRKLAWGPIISALEEREKGIQSSIDRAHKAKDEAEEILRKNRELLA
KADAESDKIIREGKEYGEKLRAGIAEKAQAEAAKMISMAKEEIEQEKRRALDVLRNEVAELAVMGAEKIIKTSLDADMQK
KIVDSMIQDLSTKRN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=159, Percent_Identity=38.3647798742138, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_CHLPD (A1BJW4)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_913115.1
- STRING:   A1BJW4
- GeneID:   4570005
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_2707
- NMPDR:   fig|290317.7.peg.2828
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK14472
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19467; Mature: 19467

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfd72124)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSGVILLNGGLLSPNPGLIFWTTVSFVIVLLILRKLAWGPIISALEEREKGIQSSIDR
CCCCCEEEEECCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHKAKDEAEEILRKNRELLAKADAESDKIIREGKEYGEKLRAGIAEKAQAEAAKMISMAK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIEQEKRRALDVLRNEVAELAVMGAEKIIKTSLDADMQKKIVDSMIQDLSTKRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLTSGVILLNGGLLSPNPGLIFWTTVSFVIVLLILRKLAWGPIISALEEREKGIQSSIDR
CCCCCEEEEECCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHKAKDEAEEILRKNRELLAKADAESDKIIREGKEYGEKLRAGIAEKAQAEAAKMISMAK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIEQEKRRALDVLRNEVAELAVMGAEKIIKTSLDADMQKKIVDSMIQDLSTKRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA