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The map label for this gene is atpH

Identifier: 119358470

GI number: 119358470

Start: 3098258

End: 3098803

Strand: Reverse

Name: atpH

Synonym: Cpha266_2706

Alternate gene names: 119358470

Gene position: 3098803-3098258 (Counterclockwise)

Preceding gene: 119358471

Following gene: 119358469

Centisome position: 98.88

GC content: 48.72

Gene sequence:

>546_bases
ATGTCAAGTGTTATAGCAAGTCGGCGTTATGCCTCAGCCTTATTGTCTGCAGCCGAAGAGGGAGGATTTCTTGATCAGGC
GACTCAGGAGCTCGCGCAAATCAAAATTGTTCTCGATCAATCTCGCGAGCTGGTCCATGTGTTACGCAGCCCGGTGATCA
ATGCCGACAAGAAAACGCATATCCTCCAGGAAGTGTTCGCGGATACGGTAGGCGACAAGGTGATGATATTTTTAAAGCTG
ATAGCCAAAAAGAAACGTTCGGGAATGCTGCCGCAAATCATCGTTGAGTACCAAAAGCTCCTTGATGAAGCCAATGGCAT
TATCAATGTTTCCATTACGAGCGCAACCCCCATGAGTGATGATCAGGTAAAAGCGCTTGTAGCCAAACTCTCGTCATATA
CCGGCAAGACCATTCGGGAGAAAATGGCGCTGAACGGAGAGCTGCTTGGCGGTGTAACCGTAAAAATCGGCGACACGATT
CTTGACGGCAGCGTGCGTCATCAGCTACAGTTGCTCAAAAAAGCCCTTGTATCGGAACGCGTATAA

Upstream 100 bases:

>100_bases
AAAATCATTAAAACCTCTCTTGATGCCGACATGCAGAAAAAAATTGTCGACAGCATGATTCAGGATCTTTCAACGAAACG
TAACTGAAAAAGGTCAGGAC

Downstream 100 bases:

>100_bases
GCGGTATCAGGCATAGGCAACGACCGGGTTTATGCATAACAGCCTGCTTCCGGCGGGCTGTTTGCGTGTCGGGAGGCCAT
AGGGCAAGGTTCGGCCTCAT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSSVIASRRYASALLSAAEEGGFLDQATQELAQIKIVLDQSRELVHVLRSPVINADKKTHILQEVFADTVGDKVMIFLKL
IAKKKRSGMLPQIIVEYQKLLDEANGIINVSITSATPMSDDQVKALVAKLSSYTGKTIREKMALNGELLGGVTVKIGDTI
LDGSVRHQLQLLKKALVSERV

Sequences:

>Translated_181_residues
MSSVIASRRYASALLSAAEEGGFLDQATQELAQIKIVLDQSRELVHVLRSPVINADKKTHILQEVFADTVGDKVMIFLKL
IAKKKRSGMLPQIIVEYQKLLDEANGIINVSITSATPMSDDQVKALVAKLSSYTGKTIREKMALNGELLGGVTVKIGDTI
LDGSVRHQLQLLKKALVSERV
>Mature_180_residues
SSVIASRRYASALLSAAEEGGFLDQATQELAQIKIVLDQSRELVHVLRSPVINADKKTHILQEVFADTVGDKVMIFLKLI
AKKKRSGMLPQIIVEYQKLLDEANGIINVSITSATPMSDDQVKALVAKLSSYTGKTIREKMALNGELLGGVTVKIGDTIL
DGSVRHQLQLLKKALVSERV

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=174, Percent_Identity=28.1609195402299, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71984717, Length=174, Percent_Identity=28.1609195402299, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320504, Length=173, Percent_Identity=26.0115606936416, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_CHLPD (A1BJW3)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_913114.1
- ProteinModelPortal:   A1BJW3
- STRING:   A1BJW3
- GeneID:   4570004
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_2706
- NMPDR:   fig|290317.7.peg.2827
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   GNLIENY
- ProtClustDB:   PRK05758
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19754; Mature: 19623

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVIASRRYASALLSAAEEGGFLDQATQELAQIKIVLDQSRELVHVLRSPVINADKKTH
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ILQEVFADTVGDKVMIFLKLIAKKKRSGMLPQIIVEYQKLLDEANGIINVSITSATPMSD
HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCH
DQVKALVAKLSSYTGKTIREKMALNGELLGGVTVKIGDTILDGSVRHQLQLLKKALVSER
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCEEEEECCCHHCHHHHHHHHHHHHHHHHCC
V
C
>Mature Secondary Structure 
SSVIASRRYASALLSAAEEGGFLDQATQELAQIKIVLDQSRELVHVLRSPVINADKKTH
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
ILQEVFADTVGDKVMIFLKLIAKKKRSGMLPQIIVEYQKLLDEANGIINVSITSATPMSD
HHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCH
DQVKALVAKLSSYTGKTIREKMALNGELLGGVTVKIGDTILDGSVRHQLQLLKKALVSER
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCEEEEECCCHHCHHHHHHHHHHHHHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA