| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yqaB [H]
Identifier: 119358465
GI number: 119358465
Start: 3093559
End: 3094257
Strand: Direct
Name: yqaB [H]
Synonym: Cpha266_2701
Alternate gene names: 119358465
Gene position: 3093559-3094257 (Clockwise)
Preceding gene: 119358464
Following gene: 119358466
Centisome position: 98.71
GC content: 50.79
Gene sequence:
>699_bases GTGAAAGAGCATAACCGATACGCGTTTATTTTTGACATGGATGGCGTCCTGACTGACAACATGAAGCTTCATGCTTTATC ATGGGTCGAGCTGTTCAATGATTTCGGCCTCAAAGGTCTCGATCCCGAACGTTATCTTGTCGAAACCGCTGGCATGAAGG GTCACGATGTCCTCAAACATTTTCTCGATCCGGCGATAAACGCGACCGACGCCGACCGTCTTACCGAGCTGAAGGATTTT CTCTACCGGGTAATGTCTCGCAGTAGTATCCATCCTCTTTCAGGACTCTCTCTTTTTCTTGACGCCGCCGAACGCCTCGG GATCCGGCTCGGCGTCGGAACCGGTTCCGGCCCTAAAAACACCGGGTATGTTCTGGGTCTTCTTGGAATTCAGCAGAAAT TTCAGGCTGTTGTGACGGCTGATCAGGTTGCAAACGGTAAACCGGCTCCGGATATATTTCTTGAAGCTGCCCGCCGTCTT ATGGTTGAGCCCTCTCAATGTATTGTTTTTGAAGACGCGATCCCTGGCGTCGAAGCGGCGGAACGTGCCGGCATGAAATG CGTGGCTCTGACGACGACAAACAGCCGAAACATGTTCAGCGGCTTCGCAAATGTTATCGCCGTCGTTCATGATTTCACCG GTCTGAATCCCGAAATTCTGCTCGACATGCCTTTTAAGGCACCTTTATTGACTCATTAA
Upstream 100 bases:
>100_bases GGCGCAGGCAATAGCCCGAAATACGATGGAAGAGGTCAGAGAGGCCATGAGGCTTGGTTGAATAGAGTCGATTGAAGCAC TATTGCACAAGAGGAGAGCA
Downstream 100 bases:
>100_bases ATTATTCTGATGCACGATTTTTTTCTTCCGGTCATTAAAAATGCCCTTCTCTCGCTGGCGGTTTCAAGCGATAAACCTGT TCTGATCGAGCGACCCGCTG
Product: beta-phosphoglucomutase family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKEHNRYAFIFDMDGVLTDNMKLHALSWVELFNDFGLKGLDPERYLVETAGMKGHDVLKHFLDPAINATDADRLTELKDF LYRVMSRSSIHPLSGLSLFLDAAERLGIRLGVGTGSGPKNTGYVLGLLGIQQKFQAVVTADQVANGKPAPDIFLEAARRL MVEPSQCIVFEDAIPGVEAAERAGMKCVALTTTNSRNMFSGFANVIAVVHDFTGLNPEILLDMPFKAPLLTH
Sequences:
>Translated_232_residues MKEHNRYAFIFDMDGVLTDNMKLHALSWVELFNDFGLKGLDPERYLVETAGMKGHDVLKHFLDPAINATDADRLTELKDF LYRVMSRSSIHPLSGLSLFLDAAERLGIRLGVGTGSGPKNTGYVLGLLGIQQKFQAVVTADQVANGKPAPDIFLEAARRL MVEPSQCIVFEDAIPGVEAAERAGMKCVALTTTNSRNMFSGFANVIAVVHDFTGLNPEILLDMPFKAPLLTH >Mature_232_residues MKEHNRYAFIFDMDGVLTDNMKLHALSWVELFNDFGLKGLDPERYLVETAGMKGHDVLKHFLDPAINATDADRLTELKDF LYRVMSRSSIHPLSGLSLFLDAAERLGIRLGVGTGSGPKNTGYVLGLLGIQQKFQAVVTADQVANGKPAPDIFLEAARRL MVEPSQCIVFEDAIPGVEAAERAGMKCVALTTTNSRNMFSGFANVIAVVHDFTGLNPEILLDMPFKAPLLTH
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates fructose 1-phosphate and 6-phosphogluconate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=223, Percent_Identity=28.2511210762332, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1789046, Length=190, Percent_Identity=36.3157894736842, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1787576, Length=190, Percent_Identity=29.4736842105263, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI87082080, Length=184, Percent_Identity=30.9782608695652, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1788021, Length=196, Percent_Identity=23.469387755102, Blast_Score=60, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25464; Mature: 25464
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEHNRYAFIFDMDGVLTDNMKLHALSWVELFNDFGLKGLDPERYLVETAGMKGHDVLKH CCCCCCEEEEEECCCEEECCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHH FLDPAINATDADRLTELKDFLYRVMSRSSIHPLSGLSLFLDAAERLGIRLGVGTGSGPKN HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC TGYVLGLLGIQQKFQAVVTADQVANGKPAPDIFLEAARRLMVEPSQCIVFEDAIPGVEAA CCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH ERAGMKCVALTTTNSRNMFSGFANVIAVVHDFTGLNPEILLDMPFKAPLLTH HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MKEHNRYAFIFDMDGVLTDNMKLHALSWVELFNDFGLKGLDPERYLVETAGMKGHDVLKH CCCCCCEEEEEECCCEEECCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHH FLDPAINATDADRLTELKDFLYRVMSRSSIHPLSGLSLFLDAAERLGIRLGVGTGSGPKN HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC TGYVLGLLGIQQKFQAVVTADQVANGKPAPDIFLEAARRLMVEPSQCIVFEDAIPGVEAA CCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH ERAGMKCVALTTTNSRNMFSGFANVIAVVHDFTGLNPEILLDMPFKAPLLTH HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]