| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358459
Identifier: 119358459
GI number: 119358459
Start: 3088189
End: 3088821
Strand: Reverse
Name: 119358459
Synonym: Cpha266_2695
Alternate gene names: NA
Gene position: 3088821-3088189 (Counterclockwise)
Preceding gene: 119358460
Following gene: 119358458
Centisome position: 98.56
GC content: 50.55
Gene sequence:
>633_bases ATGACTATCATAAAACCCCGGCTATTCTGCTTTTTTATTTCATTTTTCCTCCTCGCCGCACTCGATAGCAGGCCCGCAGC AATCGCGCAAACCGACAATCCCCATGCGGATACCGACACAGGCAAGCGGAGGATCTCCCTTAACGAACTTGCGTTTGGTA CAGGGTATATCCGGGGAACTCTTGACCATGGCTCCAGAGATCATGCCGTTTATCCTGCATTTGTGCGCATTGGATTCACG CTCAACCCTCTCTTTGGCATCAGGAGTGAACGCGCATCCCTTCAGCTGGCACTCGAACCATTTTTAAATCCGGTATCTTC AGAAACAGACGGAGTGGAAGCCGGCATCGGCATCGGTTTGCGCTACAGGCATAAACTATCCCTTCCTCTCGATATTTATA TAGAAGGAAGCATCGCGCCAATGTACCTCGGAATCGATACCGGAGAGCAAGGCGCAGGCGGATTTAATTTTCTTGACCAG GCAGGAGCGGGACTTCAGTACAGAATAACGAAAACCAATGCTCTTTTCGGGGGATACCGCTTTCGGCATATCTCTCATGC GGGCACGATGGATCGATCCAACGACGGCATCAACTCCCATGCGCTTGTTCTTGGAGTTTCCTGGTTATACTGA
Upstream 100 bases:
>100_bases TTCGTCGATCGTCGGGTGCATCATAACCGATCCTGACAGATCGTTTTGTTATCGTTTTACGACGGTTATATTCTGTTCCC TTTAACCTTTACAACAGAAT
Downstream 100 bases:
>100_bases TCTGACAGGGGGATCTCTGCCTCTTGACGGGAACAACACGGCGAAAGAATCGCCAAGCGAAAAAAGAGCGATATCGTCAC GATGCGATCATGGCCGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTIIKPRLFCFFISFFLLAALDSRPAAIAQTDNPHADTDTGKRRISLNELAFGTGYIRGTLDHGSRDHAVYPAFVRIGFT LNPLFGIRSERASLQLALEPFLNPVSSETDGVEAGIGIGLRYRHKLSLPLDIYIEGSIAPMYLGIDTGEQGAGGFNFLDQ AGAGLQYRITKTNALFGGYRFRHISHAGTMDRSNDGINSHALVLGVSWLY
Sequences:
>Translated_210_residues MTIIKPRLFCFFISFFLLAALDSRPAAIAQTDNPHADTDTGKRRISLNELAFGTGYIRGTLDHGSRDHAVYPAFVRIGFT LNPLFGIRSERASLQLALEPFLNPVSSETDGVEAGIGIGLRYRHKLSLPLDIYIEGSIAPMYLGIDTGEQGAGGFNFLDQ AGAGLQYRITKTNALFGGYRFRHISHAGTMDRSNDGINSHALVLGVSWLY >Mature_209_residues TIIKPRLFCFFISFFLLAALDSRPAAIAQTDNPHADTDTGKRRISLNELAFGTGYIRGTLDHGSRDHAVYPAFVRIGFTL NPLFGIRSERASLQLALEPFLNPVSSETDGVEAGIGIGLRYRHKLSLPLDIYIEGSIAPMYLGIDTGEQGAGGFNFLDQA GAGLQYRITKTNALFGGYRFRHISHAGTMDRSNDGINSHALVLGVSWLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22981; Mature: 22850
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIKPRLFCFFISFFLLAALDSRPAAIAQTDNPHADTDTGKRRISLNELAFGTGYIRGT CCEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEHHHEEEECCEEEEE LDHGSRDHAVYPAFVRIGFTLNPLFGIRSERASLQLALEPFLNPVSSETDGVEAGIGIGL ECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCE RYRHKLSLPLDIYIEGSIAPMYLGIDTGEQGAGGFNFLDQAGAGLQYRITKTNALFGGYR EEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEEECCEEECCEE FRHISHAGTMDRSNDGINSHALVLGVSWLY EEEECCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure TIIKPRLFCFFISFFLLAALDSRPAAIAQTDNPHADTDTGKRRISLNELAFGTGYIRGT CEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEHHHEEEECCEEEEE LDHGSRDHAVYPAFVRIGFTLNPLFGIRSERASLQLALEPFLNPVSSETDGVEAGIGIGL ECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCE RYRHKLSLPLDIYIEGSIAPMYLGIDTGEQGAGGFNFLDQAGAGLQYRITKTNALFGGYR EEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEEECCEEECCEE FRHISHAGTMDRSNDGINSHALVLGVSWLY EEEECCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA