Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is yjeE [C]

Identifier: 119358430

GI number: 119358430

Start: 3059902

End: 3060333

Strand: Reverse

Name: yjeE [C]

Synonym: Cpha266_2666

Alternate gene names: 119358430

Gene position: 3060333-3059902 (Counterclockwise)

Preceding gene: 119358431

Following gene: 119358429

Centisome position: 97.65

GC content: 56.71

Gene sequence:

>432_bases
ATGATCAGGGAATTCCTCTCCGGCTCGCCCGACGCAACCCGTGACTATGCGCGTCAGTTTGCCTCCGCGCTTCAGCCCGG
CGACATAATCTGTCTTGCCGGGGAACTCGGAGCGGGCAAAACCGAGTTTATGAGAGGAGTCGCCGAAGTGTTCAATTGCG
ACGACCAGTTATCGAGTCCCACGTTTGCCCTGTTTAATATCTATCACGGTTCGCGTCAGGGCAAGCCGGTCACGCTGCAC
CACTTCGATCTCTACCGCATCGAGCAGCCCGGAGAGCTCGAAACGATCGGGTTCGGCGACTATCTTTCCGGCCCATGGAT
CTCCGTTGTGGAGTGGGGCGAAAAATTTCCGGAATACCGAACCATGTACACCCGTACCGTAACGCTCTGCCATGCCGGCG
GCGACAACAGGCTAATTCAAATAACAGGCTGA

Upstream 100 bases:

>100_bases
GCCGTGTCGGAATCAGGAGAGGTCATGCCTCAGAAATCAACGTTTTTTTATCCGAAAATAATGACAGGACTTGTCTTCAA
CCCGCTCGACTGATACAGCC

Downstream 100 bases:

>100_bases
ACGCCAATGCACCTTCTCTCCATCGAATGCACCCATCTTGCCCTGAGCGCGGCAGTTTCAAACCAGGGTACCCTCACGCT
GAGGATCGGCGCAGAGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSPTFALFNIYHGSRQGKPVTLH
HFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYRTMYTRTVTLCHAGGDNRLIQITG

Sequences:

>Translated_143_residues
MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSPTFALFNIYHGSRQGKPVTLH
HFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYRTMYTRTVTLCHAGGDNRLIQITG
>Mature_143_residues
MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSPTFALFNIYHGSRQGKPVTLH
HFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYRTMYTRTVTLCHAGGDNRLIQITG

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=108, Percent_Identity=37.962962962963, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 15970; Mature: 15970

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSP
CCCCHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
TFALFNIYHGSRQGKPVTLHHFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYR
EEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHH
TMYTRTVTLCHAGGDNRLIQITG
HHHEEEEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MIREFLSGSPDATRDYARQFASALQPGDIICLAGELGAGKTEFMRGVAEVFNCDDQLSSP
CCCCHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
TFALFNIYHGSRQGKPVTLHHFDLYRIEQPGELETIGFGDYLSGPWISVVEWGEKFPEYR
EEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHH
TMYTRTVTLCHAGGDNRLIQITG
HHHEEEEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]