Click here to switch to the map view.

The map label for this gene is 119358419

Identifier: 119358419

GI number: 119358419

Start: 3041064

End: 3041495

Strand: Reverse

Name: 119358419

Synonym: Cpha266_2655

Alternate gene names: NA

Gene position: 3041495-3041064 (Counterclockwise)

Preceding gene: 119358420

Following gene: 119358417

Centisome position: 97.05

GC content: 45.37

Gene sequence:

>432_bases
ATGAGTTTTCGCATAGTGCTTGATACGAACTGCATTGTCTCTGCACTCATATTTTCGAGACACAAAATGTCATGGCTTCG
CCACAACTGGCAATCCGGGAACATCATACCGTTAGTCAACAAAGAAACCGCCAGCGAACTGATAAAAGTATTCACCTATC
CAAAATTCAAGCTCACCAAAACAGATCGATCCCTGCTGCTGGCCGATTTTCTGCCCTACGCCGAAACGGTAACCTCACTT
GAAGTCCCGACTGACGTGCCACTCATCAGAGATAAAACCGACCAGATATTCCTGACGTTAGCCATAGCAGCTAAAGCAGA
TGCCCTGGTCACTGGCGATCACGATCTGCTTGTTATAAAAGAAAGTTTTAAAACGATCCCGATTATCACACCAGGTGAAT
TTGAGCAATGGGTAAAAGAACGTGGGATGTAG

Upstream 100 bases:

>100_bases
GTATACAGCAGGCAGATGCCGTGCGCGATAAATTGGCGACATTAGGTATCGATGACGAAGATGTTCTGGATGCAGTACAA
TGGGCAAGAAAAAGCAAGCC

Downstream 100 bases:

>100_bases
GAAAGTGGAAAGTAGGCTGTGGAAAGTGGATAGTGGGAAGTGGAAAATGGGCAGAGGGTAATGGGTACTGGGTACTGGGA
AGAAGATAGTCCTGAGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSFRIVLDTNCIVSALIFSRHKMSWLRHNWQSGNIIPLVNKETASELIKVFTYPKFKLTKTDRSLLLADFLPYAETVTSL
EVPTDVPLIRDKTDQIFLTLAIAAKADALVTGDHDLLVIKESFKTIPIITPGEFEQWVKERGM

Sequences:

>Translated_143_residues
MSFRIVLDTNCIVSALIFSRHKMSWLRHNWQSGNIIPLVNKETASELIKVFTYPKFKLTKTDRSLLLADFLPYAETVTSL
EVPTDVPLIRDKTDQIFLTLAIAAKADALVTGDHDLLVIKESFKTIPIITPGEFEQWVKERGM
>Mature_142_residues
SFRIVLDTNCIVSALIFSRHKMSWLRHNWQSGNIIPLVNKETASELIKVFTYPKFKLTKTDRSLLLADFLPYAETVTSLE
VPTDVPLIRDKTDQIFLTLAIAAKADALVTGDHDLLVIKESFKTIPIITPGEFEQWVKERGM

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16277; Mature: 16146

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRIVLDTNCIVSALIFSRHKMSWLRHNWQSGNIIPLVNKETASELIKVFTYPKFKLTK
CEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEEC
TDRSLLLADFLPYAETVTSLEVPTDVPLIRDKTDQIFLTLAIAAKADALVTGDHDLLVIK
CCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEE
ESFKTIPIITPGEFEQWVKERGM
CCCCEEEEECCCCHHHHHHHCCC
>Mature Secondary Structure 
SFRIVLDTNCIVSALIFSRHKMSWLRHNWQSGNIIPLVNKETASELIKVFTYPKFKLTK
EEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEEC
TDRSLLLADFLPYAETVTSLEVPTDVPLIRDKTDQIFLTLAIAAKADALVTGDHDLLVIK
CCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEE
ESFKTIPIITPGEFEQWVKERGM
CCCCEEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA