| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358418
Identifier: 119358418
GI number: 119358418
Start: 3040554
End: 3040811
Strand: Direct
Name: 119358418
Synonym: Cpha266_2654
Alternate gene names: NA
Gene position: 3040554-3040811 (Clockwise)
Preceding gene: 119358393
Following gene: 119358421
Centisome position: 97.02
GC content: 48.06
Gene sequence:
>258_bases TTGCCCACGAATTCACACGAATTTTCACGAAAAGAAATTGGCAGTTGGTTTTCTCTTGCTTCGCCGATAAAAACAACTGC CCGTTTTTTGATTAAGAGACGAATTTGTGGATTGAGCATCCCTTACTCCCTTTCTGTCATCTCGACTATCGGGAGAGATC TCTCTTCTGTTGTTTTCCCCTGTTCATGCTCAGGACTTCCCAACCCCCCGAGATCCCTCTCTGCGTTCGGGATGACAGGA GGGGGCAGTTCGGGATGA
Upstream 100 bases:
>100_bases ATATGTTTTTATATATATCATTATGGTTTGCGGTTATATTCCAGGGCCCGGAATTATTACGTCATGTGTTTGACGGAAGG ATTGGGATGAAGAGGGGGAG
Downstream 100 bases:
>100_bases AAGAATGTACCAGTTCGGGATGAGAGGATTAAGGCTGTTTTGCTATTTCGCCATCTCGCTATCCAGCTATCCAGCCTATT CTTCTCATCTCTACTATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MPTNSHEFSRKEIGSWFSLASPIKTTARFLIKRRICGLSIPYSLSVISTIGRDLSSVVFPCSCSGLPNPPRSLSAFGMTG GGSSG
Sequences:
>Translated_85_residues MPTNSHEFSRKEIGSWFSLASPIKTTARFLIKRRICGLSIPYSLSVISTIGRDLSSVVFPCSCSGLPNPPRSLSAFGMTG GGSSG >Mature_84_residues PTNSHEFSRKEIGSWFSLASPIKTTARFLIKRRICGLSIPYSLSVISTIGRDLSSVVFPCSCSGLPNPPRSLSAFGMTGG GSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9009; Mature: 8878
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNSHEFSRKEIGSWFSLASPIKTTARFLIKRRICGLSIPYSLSVISTIGRDLSSVVFP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC CSCSGLPNPPRSLSAFGMTGGGSSG CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTNSHEFSRKEIGSWFSLASPIKTTARFLIKRRICGLSIPYSLSVISTIGRDLSSVVFP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC CSCSGLPNPPRSLSAFGMTGGGSSG CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA