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The map label for this gene is wcaE [C]

Identifier: 119358397

GI number: 119358397

Start: 3019436

End: 3020212

Strand: Reverse

Name: wcaE [C]

Synonym: Cpha266_2632

Alternate gene names: 119358397

Gene position: 3020212-3019436 (Counterclockwise)

Preceding gene: 119358398

Following gene: 119358396

Centisome position: 96.37

GC content: 26.51

Gene sequence:

>777_bases
ATGAAAATATCTATAATTACAATTTGTTATAATAATAAAAATAATATAGAACGAACTATACGATCGGTGCTGAGTCAGAA
AGATATTAAGTTTGAGTATATAATTATTGATGGAAAATCAACTGATGGTACAATGGATATAGTCGATATTTATAGGAATA
AAATTGATGTTGTAATAAGTGAACGAGATAAGGGAATATATGATGCTATAAATAAAGGAATTGATAATTCAAGTTGCGAT
ATTATTGGTTTAATTCATGCAGGAGATGAATTATATGATGATAATGTTATTCGTGATATAGTTGATAGATTTGAGGCAAA
TGATATAGATGGTTTATATGGTCATAGTGAGATTAGAGGAAAAAATAATGATGTATATATGTATAATATTAGTCCAGAGT
TTAATAAAAGAAATATTTATTTCGGGTGGTTTCCATCACATCAAAGTATTTATATTAAGAAAAAGTGTTTCAATCAATTA
GGTAAATATAATAATAATTATAAAATAGCAGGTGATTATGAGTTGTTTCTTCGATTCTTTTTGCAAGATAACTTGAGATT
TGTATTGTTTGACAGGTTGATTATAAGAGCGTACACGGGTGGTGTTAGCAGTAAATCACTCATAAATAGAATATTATCTA
ATTATGAGTGTATGTTAGCATGGAGAAATAATGGATATTTTGTGCCTGTTTATTTATTTTTGCTGAAGCCTATAAGGAAA
CTTTATCTAAAGTTAATTAAAGATACAAGGTATATAGACGGTAAGTATAAATGTTAA

Upstream 100 bases:

>100_bases
GAAATAAACTTTATAACAAGCAGAATATAGATGTTTTTGTGTTTTTTTGTGAATATTCATATGCCTGTACTTGTAAAAAT
AGTTTTTAATAAATAAAATA

Downstream 100 bases:

>100_bases
ATACTTTAGAGCGCCTTTATTTATTATTGAATGATATATCTTTATTGATATAAAGCGGAGTTAGCAGTTATAATAACCAT
AAGAAAACGTATTTTACAGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKISIITICYNNKNNIERTIRSVLSQKDIKFEYIIIDGKSTDGTMDIVDIYRNKIDVVISERDKGIYDAINKGIDNSSCD
IIGLIHAGDELYDDNVIRDIVDRFEANDIDGLYGHSEIRGKNNDVYMYNISPEFNKRNIYFGWFPSHQSIYIKKKCFNQL
GKYNNNYKIAGDYELFLRFFLQDNLRFVLFDRLIIRAYTGGVSSKSLINRILSNYECMLAWRNNGYFVPVYLFLLKPIRK
LYLKLIKDTRYIDGKYKC

Sequences:

>Translated_258_residues
MKISIITICYNNKNNIERTIRSVLSQKDIKFEYIIIDGKSTDGTMDIVDIYRNKIDVVISERDKGIYDAINKGIDNSSCD
IIGLIHAGDELYDDNVIRDIVDRFEANDIDGLYGHSEIRGKNNDVYMYNISPEFNKRNIYFGWFPSHQSIYIKKKCFNQL
GKYNNNYKIAGDYELFLRFFLQDNLRFVLFDRLIIRAYTGGVSSKSLINRILSNYECMLAWRNNGYFVPVYLFLLKPIRK
LYLKLIKDTRYIDGKYKC
>Mature_258_residues
MKISIITICYNNKNNIERTIRSVLSQKDIKFEYIIIDGKSTDGTMDIVDIYRNKIDVVISERDKGIYDAINKGIDNSSCD
IIGLIHAGDELYDDNVIRDIVDRFEANDIDGLYGHSEIRGKNNDVYMYNISPEFNKRNIYFGWFPSHQSIYIKKKCFNQL
GKYNNNYKIAGDYELFLRFFLQDNLRFVLFDRLIIRAYTGGVSSKSLINRILSNYECMLAWRNNGYFVPVYLFLLKPIRK
LYLKLIKDTRYIDGKYKC

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788368, Length=218, Percent_Identity=28.4403669724771, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30352; Mature: 30352

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIITICYNNKNNIERTIRSVLSQKDIKFEYIIIDGKSTDGTMDIVDIYRNKIDVVIS
CEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEE
ERDKGIYDAINKGIDNSSCDIIGLIHAGDELYDDNVIRDIVDRFEANDIDGLYGHSEIRG
CCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCC
KNNDVYMYNISPEFNKRNIYFGWFPSHQSIYIKKKCFNQLGKYNNNYKIAGDYELFLRFF
CCCCEEEEECCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEECCHHHHHHHH
LQDNLRFVLFDRLIIRAYTGGVSSKSLINRILSNYECMLAWRNNGYFVPVYLFLLKPIRK
HHCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHHH
LYLKLIKDTRYIDGKYKC
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKISIITICYNNKNNIERTIRSVLSQKDIKFEYIIIDGKSTDGTMDIVDIYRNKIDVVIS
CEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEE
ERDKGIYDAINKGIDNSSCDIIGLIHAGDELYDDNVIRDIVDRFEANDIDGLYGHSEIRG
CCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCC
KNNDVYMYNISPEFNKRNIYFGWFPSHQSIYIKKKCFNQLGKYNNNYKIAGDYELFLRFF
CCCCEEEEECCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEECCHHHHHHHH
LQDNLRFVLFDRLIIRAYTGGVSSKSLINRILSNYECMLAWRNNGYFVPVYLFLLKPIRK
HHCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHHH
LYLKLIKDTRYIDGKYKC
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]