| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358396
Identifier: 119358396
GI number: 119358396
Start: 3016560
End: 3017762
Strand: Reverse
Name: 119358396
Synonym: Cpha266_2630
Alternate gene names: NA
Gene position: 3017762-3016560 (Counterclockwise)
Preceding gene: 119358397
Following gene: 119358395
Centisome position: 96.29
GC content: 30.59
Gene sequence:
>1203_bases ATGCAATACAAAATTCTTTATATATCTAAATCATTTCTTCGTGGGGGTGCTGCACAAGGAAATAATAAAGTGATTTTAGC ACTCGAAAGCGTTGGACATAAAATAATAAAAATAGATGAAAACGAGGTTTTTAAATATAATCTATTTATAAAAATCTTTC GTAGGATTGAGCGTGTGATAGAAAAGATTATGTTGCCAGAAAATGTAGATGGGCATTTTGTTCGTATGTGGGGACCAACA GTAAAAATAAAAAATGTTATTGATCAGTATTTGCCTGATATTGTGCAGGTAGGTTTTTCTGGTGGAAATATTCTGTCGTT TAAAGAAATAGCAGAAATAGATATGCCGATAGTATTTAGAATGTCTGATCTATGGCCGTTTTCGGGCTATTCTCATTATC CGACTCAAGTTGAATTAAATTATATTGATAAAATAAAGCGCTATATTTGTGTGAGGATATTTAATCATAACTATAAAAAT GATGTGGTCTCATGTCTTCGAAAATCAAATATATATATAGCTTTTCCGAGTTTATGGTTAAAGAATTCTATTGCTGGTAA AATGAGTAGAGTCAATAATTTGAGTGTGATAAGAAATTCATATATGTATTCATTAAGTGAAAGTAATAAAATAGAAAAAC AAGATAAACATGCGACTGATAAAAATATTGTTTTAGTGGTGGTTGCTTCGAAATTAGATGATTACAGAAAAGGAGTTTGG GGATTAAAGCGATATTTAAATGATCTTGTGAAAGGTATTCCTATAAAGTATTTATTGATTGGTAATTATTCGGTTAAAAT GAAAAGAGAGTTTGACCGTTGTAGTGATGGGGTCGTGTTTTATGGCCCTTTAAATAATAAGGATGTTATTAATGTTATAT CTAGTGCAAATTATTTGCTTTGCCCATCAATATATGATAATTCCCCTAATGTTATCTTGGAGGCTTATTCAGTAATGGTG CCTGTGATTGTCCAATGTGGGGGTGGAGCTGCTGAATATGTAAAAGATGGGTATAATGGTTTGTTTTTTGACTTTTTGAA TTCCTTACCAGGAGATTTAAGTAAGCTTATAGTCAGCGAAAAATCAAAAGGCATTAAAAAGGAAAATTGTTATCAGACTC TTCTTGATGATTATTCATTAAAAAAGATAGGTGATGATTATACGAAATTATATGAAAAAGCGTTAGTCTCATATCAAAGA TAA
Upstream 100 bases:
>100_bases TTTCGAGGTTCCCAATATTTCGAGGTTCCCTATAGTTATAACGATTAAATATTTCATCTATAGGAGCCCTGTGACTTAAG CCGTCAAATAATTAATATTA
Downstream 100 bases:
>100_bases CTGTGTAATATAAAAATCTTATTATTTCTTCATAATCAACAAAAACCCGGATTAATGATTCAGAAATACTACATAAGCCT AACATAAGAGGAGTGACGTG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MQYKILYISKSFLRGGAAQGNNKVILALESVGHKIIKIDENEVFKYNLFIKIFRRIERVIEKIMLPENVDGHFVRMWGPT VKIKNVIDQYLPDIVQVGFSGGNILSFKEIAEIDMPIVFRMSDLWPFSGYSHYPTQVELNYIDKIKRYICVRIFNHNYKN DVVSCLRKSNIYIAFPSLWLKNSIAGKMSRVNNLSVIRNSYMYSLSESNKIEKQDKHATDKNIVLVVVASKLDDYRKGVW GLKRYLNDLVKGIPIKYLLIGNYSVKMKREFDRCSDGVVFYGPLNNKDVINVISSANYLLCPSIYDNSPNVILEAYSVMV PVIVQCGGGAAEYVKDGYNGLFFDFLNSLPGDLSKLIVSEKSKGIKKENCYQTLLDDYSLKKIGDDYTKLYEKALVSYQR
Sequences:
>Translated_400_residues MQYKILYISKSFLRGGAAQGNNKVILALESVGHKIIKIDENEVFKYNLFIKIFRRIERVIEKIMLPENVDGHFVRMWGPT VKIKNVIDQYLPDIVQVGFSGGNILSFKEIAEIDMPIVFRMSDLWPFSGYSHYPTQVELNYIDKIKRYICVRIFNHNYKN DVVSCLRKSNIYIAFPSLWLKNSIAGKMSRVNNLSVIRNSYMYSLSESNKIEKQDKHATDKNIVLVVVASKLDDYRKGVW GLKRYLNDLVKGIPIKYLLIGNYSVKMKREFDRCSDGVVFYGPLNNKDVINVISSANYLLCPSIYDNSPNVILEAYSVMV PVIVQCGGGAAEYVKDGYNGLFFDFLNSLPGDLSKLIVSEKSKGIKKENCYQTLLDDYSLKKIGDDYTKLYEKALVSYQR >Mature_400_residues MQYKILYISKSFLRGGAAQGNNKVILALESVGHKIIKIDENEVFKYNLFIKIFRRIERVIEKIMLPENVDGHFVRMWGPT VKIKNVIDQYLPDIVQVGFSGGNILSFKEIAEIDMPIVFRMSDLWPFSGYSHYPTQVELNYIDKIKRYICVRIFNHNYKN DVVSCLRKSNIYIAFPSLWLKNSIAGKMSRVNNLSVIRNSYMYSLSESNKIEKQDKHATDKNIVLVVVASKLDDYRKGVW GLKRYLNDLVKGIPIKYLLIGNYSVKMKREFDRCSDGVVFYGPLNNKDVINVISSANYLLCPSIYDNSPNVILEAYSVMV PVIVQCGGGAAEYVKDGYNGLFFDFLNSLPGDLSKLIVSEKSKGIKKENCYQTLLDDYSLKKIGDDYTKLYEKALVSYQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45887; Mature: 45887
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYKILYISKSFLRGGAAQGNNKVILALESVGHKIIKIDENEVFKYNLFIKIFRRIERVI CCEEEEEEEHHHHCCCCCCCCCEEEEEEHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHH EKIMLPENVDGHFVRMWGPTVKIKNVIDQYLPDIVQVGFSGGNILSFKEIAEIDMPIVFR HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHCCCCEEEE MSDLWPFSGYSHYPTQVELNYIDKIKRYICVRIFNHNYKNDVVSCLRKSNIYIAFPSLWL ECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECHHHH KNSIAGKMSRVNNLSVIRNSYMYSLSESNKIEKQDKHATDKNIVLVVVASKLDDYRKGVW HHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCHHHCCCCCCCEEEEEEEHHHHHHHHHHH GLKRYLNDLVKGIPIKYLLIGNYSVKMKREFDRCSDGVVFYGPLNNKDVINVISSANYLL HHHHHHHHHHHCCCEEEEEEECCEEEEHHHHHCCCCCEEEECCCCCCHHHHHHCCCCEEE CPSIYDNSPNVILEAYSVMVPVIVQCGGGAAEYVKDGYNGLFFDFLNSLPGDLSKLIVSE CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH KSKGIKKENCYQTLLDDYSLKKIGDDYTKLYEKALVSYQR HHCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MQYKILYISKSFLRGGAAQGNNKVILALESVGHKIIKIDENEVFKYNLFIKIFRRIERVI CCEEEEEEEHHHHCCCCCCCCCEEEEEEHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHH EKIMLPENVDGHFVRMWGPTVKIKNVIDQYLPDIVQVGFSGGNILSFKEIAEIDMPIVFR HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHCCCCEEEE MSDLWPFSGYSHYPTQVELNYIDKIKRYICVRIFNHNYKNDVVSCLRKSNIYIAFPSLWL ECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECHHHH KNSIAGKMSRVNNLSVIRNSYMYSLSESNKIEKQDKHATDKNIVLVVVASKLDDYRKGVW HHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCHHHCCCCCCCEEEEEEEHHHHHHHHHHH GLKRYLNDLVKGIPIKYLLIGNYSVKMKREFDRCSDGVVFYGPLNNKDVINVISSANYLL HHHHHHHHHHHCCCEEEEEEECCEEEEHHHHHCCCCCEEEECCCCCCHHHHHHCCCCEEE CPSIYDNSPNVILEAYSVMVPVIVQCGGGAAEYVKDGYNGLFFDFLNSLPGDLSKLIVSE CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH KSKGIKKENCYQTLLDDYSLKKIGDDYTKLYEKALVSYQR HHCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA