| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358385
Identifier: 119358385
GI number: 119358385
Start: 3002940
End: 3004103
Strand: Reverse
Name: 119358385
Synonym: Cpha266_2618
Alternate gene names: NA
Gene position: 3004103-3002940 (Counterclockwise)
Preceding gene: 119358386
Following gene: 119358384
Centisome position: 95.86
GC content: 30.41
Gene sequence:
>1164_bases ATGGCTAATGTGTTATTGCTGGATGCTCATACAATACAAGCTCTTCCTGTTATGAAGGCTCTGAAAAAATCAGGCCACAA AGTATTTATTGAATGTGAGACGAAAAAATCATATGGATATTATAGTAGGTATTCTGATGTAAAATTTATAAAACCATTAG TTGATTATAATTCAAATGTATATTTGCAACATATAATTAAACTGGTTGAAAAGTACGATATTGATATACTGCTTCCGCTG TTTGATGATTCCGCCCAGTTCGCAAGTAAATATAAAGAAATATTAAAATGTATATTGTTATTATCAGTGCCTACGTATGA TGTTTTCTTAAAAGGTTACAGGAAAAATAATCTTATGTGTTTTTGTAAGGAAAATGGAATACCTCATCCAAAGACAATTG AATTAACAATAGAAAATATAGATTATGCTGCAGAGTATACTGGGTTGCCTGCTATAATAAAGCCAGATATTAGTTTTGGG GCAAGGGGAATGATGTTTGTTAATAATATTAAAGAAATAAAGATACTATTAAAAAATATATTGAGAATATATGGAACGTG TACACTACAAGAATTTATACCTCCAGGTGGCAGACAATATATGGTACATCATTTTAGAACAGTTGCTGATGAATTTTTAT CATCAATGGTTGTTGAAAAAATAAGGTACTATCCGGAAACAGGGGGGAGTAGTTGTTGTAACAGAACAATTTCATACGTA GAAATAGAGACATTGACTAAAAAAGTTCTTAGCAAGCTCAATTGGGAAGGTATTGCTCATTTTGACCTTATCGAGGATCC TCGTGATAATGTAATTAAAATTATGGAGATTAACCCGAGACTTTCTGGTAGTATAAAATCTTCATTTAAAGCGGGTGTTG ATTATGCTAATATATACGTTGATTATTGCCTTGGTAATCAGATAGAAAATTACAATATAAAGTATAATGTTTATGTTAGA TACTTAGGGCTAGATATTTTATGGTTTTTAAAAAGTGTTAATCGTTTTAATTCAAACCCATCATGGTTTAAATTTATAGG GAAAGATATTTGTTTTCAAGAGGGCGGATTAGATGATCCTTTTCCGTTCCTGTTTGGAACATATTCTGGTATAAAAAAGT TATTTGATTTTGATTTTAGAAAATCAAAATCAGGCCTTAGATAA
Upstream 100 bases:
>100_bases TGAATAAAAATATCACGCCGTTTACAGTGGTTGGTGGGGTACCTGCTAAAGTCTTAAAAATTAGAGAATAGGATACTATT TTAAACGAATAATATTTATT
Downstream 100 bases:
>100_bases TAAGACTGTTAACATGAATATACTAACATTTGATATAGAAGAGTGGTTTCATTTGTTTGATAATGTTTTTACTGATGATT TGAATCAGTGGAGCAACTAT
Product: carbamoylphosphate synthase large subunit (split gene in MJ)-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MANVLLLDAHTIQALPVMKALKKSGHKVFIECETKKSYGYYSRYSDVKFIKPLVDYNSNVYLQHIIKLVEKYDIDILLPL FDDSAQFASKYKEILKCILLLSVPTYDVFLKGYRKNNLMCFCKENGIPHPKTIELTIENIDYAAEYTGLPAIIKPDISFG ARGMMFVNNIKEIKILLKNILRIYGTCTLQEFIPPGGRQYMVHHFRTVADEFLSSMVVEKIRYYPETGGSSCCNRTISYV EIETLTKKVLSKLNWEGIAHFDLIEDPRDNVIKIMEINPRLSGSIKSSFKAGVDYANIYVDYCLGNQIENYNIKYNVYVR YLGLDILWFLKSVNRFNSNPSWFKFIGKDICFQEGGLDDPFPFLFGTYSGIKKLFDFDFRKSKSGLR
Sequences:
>Translated_387_residues MANVLLLDAHTIQALPVMKALKKSGHKVFIECETKKSYGYYSRYSDVKFIKPLVDYNSNVYLQHIIKLVEKYDIDILLPL FDDSAQFASKYKEILKCILLLSVPTYDVFLKGYRKNNLMCFCKENGIPHPKTIELTIENIDYAAEYTGLPAIIKPDISFG ARGMMFVNNIKEIKILLKNILRIYGTCTLQEFIPPGGRQYMVHHFRTVADEFLSSMVVEKIRYYPETGGSSCCNRTISYV EIETLTKKVLSKLNWEGIAHFDLIEDPRDNVIKIMEINPRLSGSIKSSFKAGVDYANIYVDYCLGNQIENYNIKYNVYVR YLGLDILWFLKSVNRFNSNPSWFKFIGKDICFQEGGLDDPFPFLFGTYSGIKKLFDFDFRKSKSGLR >Mature_386_residues ANVLLLDAHTIQALPVMKALKKSGHKVFIECETKKSYGYYSRYSDVKFIKPLVDYNSNVYLQHIIKLVEKYDIDILLPLF DDSAQFASKYKEILKCILLLSVPTYDVFLKGYRKNNLMCFCKENGIPHPKTIELTIENIDYAAEYTGLPAIIKPDISFGA RGMMFVNNIKEIKILLKNILRIYGTCTLQEFIPPGGRQYMVHHFRTVADEFLSSMVVEKIRYYPETGGSSCCNRTISYVE IETLTKKVLSKLNWEGIAHFDLIEDPRDNVIKIMEINPRLSGSIKSSFKAGVDYANIYVDYCLGNQIENYNIKYNVYVRY LGLDILWFLKSVNRFNSNPSWFKFIGKDICFQEGGLDDPFPFLFGTYSGIKKLFDFDFRKSKSGLR
Specific function: Unknown
COG id: COG0458
COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44684; Mature: 44552
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVLLLDAHTIQALPVMKALKKSGHKVFIECETKKSYGYYSRYSDVKFIKPLVDYNSNV CCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHCCCCCH YLQHIIKLVEKYDIDILLPLFDDSAQFASKYKEILKCILLLSVPTYDVFLKGYRKNNLMC HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCEEE FCKENGIPHPKTIELTIENIDYAAEYTGLPAIIKPDISFGARGMMFVNNIKEIKILLKNI EECCCCCCCCCEEEEEEECCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LRIYGTCTLQEFIPPGGRQYMVHHFRTVADEFLSSMVVEKIRYYPETGGSSCCNRTISYV HHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHE EIETLTKKVLSKLNWEGIAHFDLIEDPRDNVIKIMEINPRLSGSIKSSFKAGVDYANIYV EHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEHEEE DYCLGNQIENYNIKYNVYVRYLGLDILWFLKSVNRFNSNPSWFKFIGKDICFQEGGLDDP EEHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC FPFLFGTYSGIKKLFDFDFRKSKSGLR CHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure ANVLLLDAHTIQALPVMKALKKSGHKVFIECETKKSYGYYSRYSDVKFIKPLVDYNSNV CCEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHCCCCCH YLQHIIKLVEKYDIDILLPLFDDSAQFASKYKEILKCILLLSVPTYDVFLKGYRKNNLMC HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCEEE FCKENGIPHPKTIELTIENIDYAAEYTGLPAIIKPDISFGARGMMFVNNIKEIKILLKNI EECCCCCCCCCEEEEEEECCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LRIYGTCTLQEFIPPGGRQYMVHHFRTVADEFLSSMVVEKIRYYPETGGSSCCNRTISYV HHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHE EIETLTKKVLSKLNWEGIAHFDLIEDPRDNVIKIMEINPRLSGSIKSSFKAGVDYANIYV EHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEHEEE DYCLGNQIENYNIKYNVYVRYLGLDILWFLKSVNRFNSNPSWFKFIGKDICFQEGGLDDP EEHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC FPFLFGTYSGIKKLFDFDFRKSKSGLR CHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA