| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is glpK [H]
Identifier: 119358358
GI number: 119358358
Start: 2966456
End: 2967907
Strand: Reverse
Name: glpK [H]
Synonym: Cpha266_2590
Alternate gene names: 119358358
Gene position: 2967907-2966456 (Counterclockwise)
Preceding gene: 119358359
Following gene: 119358357
Centisome position: 94.7
GC content: 55.99
Gene sequence:
>1452_bases ATGGCTATTCTTGCGATTGATCAGGGAACGACGGGAACAACCTGCGTGCTCTATAATGAAAAGGCTGAGGTTCTCGGGAA GGCTTACCGGGAGCTGAGGCAGATTTATCCCTGCGAGGGTTGGGTTGAGCACGATCCGGAAGAGATCTGGCAGAGCGTTG TGCTTTGTGTCCGGGAGCTTCTTGAGCGATGCCCGGTGACGATTGCCGCTCTGGGTATAACGAATCAGCGGGAAACAACG ATTGTCTGGGAGCGGGCAAGCGGTCGTCCGGTGTATCATGCGATTGTCTGGCAGTGCAGACGCACGACGGAGCTTTGCCG GCGATTTGAGCAGGAAAAAGGGATGATCGCAGAAAAGACGGGGCTGCCGCTTGATGCGTATTTCAGCGCAACGAAAATCC GCTGGATTCTCGATACCTGTTCTCATCTTTCTCCGGATGCTCTTCTTTTCGGTACGGTTGACAGTTGGCTGGTGTGGAAA CTGACCGGCGGCGGGGTTCATGCGACCGATTTTACCAATGCGTCGAGAACGATGCTTTATAATATCAGGGAGAAGCGGTG GGATGGGGAGCTTCTCGATCTGTTTGGAATTCCTGGTTCGATGTTGCCGGAGGTTCGTCCGTCAATGGATGATTTTGGCC GGGTGAGCGCTCTTGATGAGCTGGCGGGGGTGCCGGTGCTTGCGGTTGCCGGCGATCAGCAGGCCGCTCTGTTCGGGCAG TGCTGTTTTGAGCCGGGCTCTATCAAGAATACCTATGGCACGGGTTGTTTTATGGTTATGAATACCGGCGATGCATGTAT CCGTTCGCATAACGGTCTTCTGACGACGTTGGCTATTGATGCCGGAGGGCGTCCCTGTTATGCTCTTGAGGGTTCTGTTT TTATCGGCGGCGCGGTGGTTCAGTGGTTGCGCGACGAGTTGCAGTTGATGAAGCATGCTTCGGAGTCTGAGGCGATGGCA AGAGCGGCGGGTTCAAATGGAGGGGTTTATCTTGTTCCTGCTTTTGTCGGCCTCGGGGCGCCTCATTGGCAGATGGAGGC GCGGGGAACGATTGTCGGGTTGACGAGGGGTACGAATAAAAATCATATTGTGCGGGCCGCTCTGGAGTCCATTGCTTTTG AGTCGTACGATGTGTTCAGGGCCATGGTTGCGGATTCGGGAATCTCGCCTGATGCGTTGGCTGTCGATGGCGGGGCGGCG GATAACGGGTTTCTTATGCAGTTTCAGGCGGATCTGCTTGGCATTCCGGTTCTGAAGGCGGCGAATATCGAGTCGACTTC GCTTGGCGCGGCTTTTCTCTGCGGGTTGCGGGCCGGCATCTGGAAGTCAGATGGGGAGTTGCGCATGGTTAATCGGCATG CGCAGGCCTGTTATCCTTCCATGGAGCCCGAGACGAGGGATGCTCTGCTTTGCGGCTGGCAAAAGGCTCTCCGCCAGACG CTGGTGAGGTAG
Upstream 100 bases:
>100_bases GCTCCTCTTCCCGTCTGTTTTTTTGCTTGCGTGTGATGGGTTTGTTTCTCTTTTTTCCGGGGTGTATGTCCGGTGTTGGC GTAACAGTGATGCTCAGGCG
Downstream 100 bases:
>100_bases GGGGCGATGCCTTGTGGTTTCTCAATGGTTTATTCGAGGGTTTTGTAAACGTAATGACGATTATGACAACTGACCATGAA GTGAAGAGCAGCGGCGAGAG
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MAILAIDQGTTGTTCVLYNEKAEVLGKAYRELRQIYPCEGWVEHDPEEIWQSVVLCVRELLERCPVTIAALGITNQRETT IVWERASGRPVYHAIVWQCRRTTELCRRFEQEKGMIAEKTGLPLDAYFSATKIRWILDTCSHLSPDALLFGTVDSWLVWK LTGGGVHATDFTNASRTMLYNIREKRWDGELLDLFGIPGSMLPEVRPSMDDFGRVSALDELAGVPVLAVAGDQQAALFGQ CCFEPGSIKNTYGTGCFMVMNTGDACIRSHNGLLTTLAIDAGGRPCYALEGSVFIGGAVVQWLRDELQLMKHASESEAMA RAAGSNGGVYLVPAFVGLGAPHWQMEARGTIVGLTRGTNKNHIVRAALESIAFESYDVFRAMVADSGISPDALAVDGGAA DNGFLMQFQADLLGIPVLKAANIESTSLGAAFLCGLRAGIWKSDGELRMVNRHAQACYPSMEPETRDALLCGWQKALRQT LVR
Sequences:
>Translated_483_residues MAILAIDQGTTGTTCVLYNEKAEVLGKAYRELRQIYPCEGWVEHDPEEIWQSVVLCVRELLERCPVTIAALGITNQRETT IVWERASGRPVYHAIVWQCRRTTELCRRFEQEKGMIAEKTGLPLDAYFSATKIRWILDTCSHLSPDALLFGTVDSWLVWK LTGGGVHATDFTNASRTMLYNIREKRWDGELLDLFGIPGSMLPEVRPSMDDFGRVSALDELAGVPVLAVAGDQQAALFGQ CCFEPGSIKNTYGTGCFMVMNTGDACIRSHNGLLTTLAIDAGGRPCYALEGSVFIGGAVVQWLRDELQLMKHASESEAMA RAAGSNGGVYLVPAFVGLGAPHWQMEARGTIVGLTRGTNKNHIVRAALESIAFESYDVFRAMVADSGISPDALAVDGGAA DNGFLMQFQADLLGIPVLKAANIESTSLGAAFLCGLRAGIWKSDGELRMVNRHAQACYPSMEPETRDALLCGWQKALRQT LVR >Mature_482_residues AILAIDQGTTGTTCVLYNEKAEVLGKAYRELRQIYPCEGWVEHDPEEIWQSVVLCVRELLERCPVTIAALGITNQRETTI VWERASGRPVYHAIVWQCRRTTELCRRFEQEKGMIAEKTGLPLDAYFSATKIRWILDTCSHLSPDALLFGTVDSWLVWKL TGGGVHATDFTNASRTMLYNIREKRWDGELLDLFGIPGSMLPEVRPSMDDFGRVSALDELAGVPVLAVAGDQQAALFGQC CFEPGSIKNTYGTGCFMVMNTGDACIRSHNGLLTTLAIDAGGRPCYALEGSVFIGGAVVQWLRDELQLMKHASESEAMAR AAGSNGGVYLVPAFVGLGAPHWQMEARGTIVGLTRGTNKNHIVRAALESIAFESYDVFRAMVADSGISPDALAVDGGAAD NGFLMQFQADLLGIPVLKAANIESTSLGAAFLCGLRAGIWKSDGELRMVNRHAQACYPSMEPETRDALLCGWQKALRQTL VR
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=442, Percent_Identity=48.6425339366516, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI4504007, Length=442, Percent_Identity=48.6425339366516, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI42794763, Length=447, Percent_Identity=47.8747203579418, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI41393575, Length=442, Percent_Identity=47.5113122171946, Blast_Score=394, Evalue=1e-110, Organism=Homo sapiens, GI88196792, Length=506, Percent_Identity=32.4110671936759, Blast_Score=284, Evalue=1e-76, Organism=Escherichia coli, GI1790361, Length=493, Percent_Identity=50.709939148073, Blast_Score=501, Evalue=1e-143, Organism=Escherichia coli, GI1789987, Length=461, Percent_Identity=25.5965292841649, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787789, Length=480, Percent_Identity=24.7916666666667, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1789168, Length=478, Percent_Identity=22.3849372384937, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790005, Length=483, Percent_Identity=22.9813664596273, Blast_Score=75, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17535599, Length=496, Percent_Identity=37.9032258064516, Blast_Score=332, Evalue=3e-91, Organism=Caenorhabditis elegans, GI71986140, Length=515, Percent_Identity=24.0776699029126, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI71986147, Length=299, Percent_Identity=29.0969899665552, Blast_Score=118, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6321755, Length=478, Percent_Identity=36.6108786610879, Blast_Score=280, Evalue=4e-76, Organism=Drosophila melanogaster, GI24655555, Length=497, Percent_Identity=39.2354124748491, Blast_Score=353, Evalue=1e-97, Organism=Drosophila melanogaster, GI24655560, Length=497, Percent_Identity=39.2354124748491, Blast_Score=353, Evalue=1e-97, Organism=Drosophila melanogaster, GI24655570, Length=497, Percent_Identity=39.2354124748491, Blast_Score=353, Evalue=1e-97, Organism=Drosophila melanogaster, GI24655574, Length=497, Percent_Identity=39.2354124748491, Blast_Score=353, Evalue=1e-97, Organism=Drosophila melanogaster, GI24655565, Length=497, Percent_Identity=39.2354124748491, Blast_Score=353, Evalue=1e-97, Organism=Drosophila melanogaster, GI17864214, Length=501, Percent_Identity=40.1197604790419, Blast_Score=349, Evalue=3e-96, Organism=Drosophila melanogaster, GI24654573, Length=431, Percent_Identity=42.4593967517401, Blast_Score=329, Evalue=3e-90, Organism=Drosophila melanogaster, GI19922058, Length=525, Percent_Identity=32.9523809523809, Blast_Score=278, Evalue=4e-75, Organism=Drosophila melanogaster, GI24652871, Length=491, Percent_Identity=32.3828920570265, Blast_Score=262, Evalue=4e-70, Organism=Drosophila melanogaster, GI24656367, Length=503, Percent_Identity=29.6222664015905, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI21357867, Length=522, Percent_Identity=29.1187739463602, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24656372, Length=344, Percent_Identity=31.6860465116279, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI45552909, Length=247, Percent_Identity=31.9838056680162, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 52748; Mature: 52617
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILAIDQGTTGTTCVLYNEKAEVLGKAYRELRQIYPCEGWVEHDPEEIWQSVVLCVREL CEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LERCPVTIAALGITNQRETTIVWERASGRPVYHAIVWQCRRTTELCRRFEQEKGMIAEKT HHHCCEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECC GLPLDAYFSATKIRWILDTCSHLSPDALLFGTVDSWLVWKLTGGGVHATDFTNASRTMLY CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEECCCCCCCHHEEE NIREKRWDGELLDLFGIPGSMLPEVRPSMDDFGRVSALDELAGVPVLAVAGDQQAALFGQ EHHHHCCCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH CCFEPGSIKNTYGTGCFMVMNTGDACIRSHNGLLTTLAIDAGGRPCYALEGSVFIGGAVV HHCCCCCCCCCCCCEEEEEEECCCHHHHCCCCEEEEEEEECCCCEEEEECCCEEECHHHH QWLRDELQLMKHASESEAMARAAGSNGGVYLVPAFVGLGAPHWQMEARGTIVGLTRGTNK HHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCEEEECCCEEEEEECCCCC NHIVRAALESIAFESYDVFRAMVADSGISPDALAVDGGAADNGFLMQFQADLLGIPVLKA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEHHHHCCCEEEE ANIESTSLGAAFLCGLRAGIWKSDGELRMVNRHAQACYPSMEPETRDALLCGWQKALRQT CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LVR HCC >Mature Secondary Structure AILAIDQGTTGTTCVLYNEKAEVLGKAYRELRQIYPCEGWVEHDPEEIWQSVVLCVREL EEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LERCPVTIAALGITNQRETTIVWERASGRPVYHAIVWQCRRTTELCRRFEQEKGMIAEKT HHHCCEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECC GLPLDAYFSATKIRWILDTCSHLSPDALLFGTVDSWLVWKLTGGGVHATDFTNASRTMLY CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEECCCCCCCHHEEE NIREKRWDGELLDLFGIPGSMLPEVRPSMDDFGRVSALDELAGVPVLAVAGDQQAALFGQ EHHHHCCCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH CCFEPGSIKNTYGTGCFMVMNTGDACIRSHNGLLTTLAIDAGGRPCYALEGSVFIGGAVV HHCCCCCCCCCCCCEEEEEEECCCHHHHCCCCEEEEEEEECCCCEEEEECCCEEECHHHH QWLRDELQLMKHASESEAMARAAGSNGGVYLVPAFVGLGAPHWQMEARGTIVGLTRGTNK HHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCEEEECCCEEEEEECCCCC NHIVRAALESIAFESYDVFRAMVADSGISPDALAVDGGAADNGFLMQFQADLLGIPVLKA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEHHHHCCCEEEE ANIESTSLGAAFLCGLRAGIWKSDGELRMVNRHAQACYPSMEPETRDALLCGWQKALRQT CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LVR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA