| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358337
Identifier: 119358337
GI number: 119358337
Start: 2944271
End: 2945704
Strand: Reverse
Name: 119358337
Synonym: Cpha266_2569
Alternate gene names: NA
Gene position: 2945704-2944271 (Counterclockwise)
Preceding gene: 119358343
Following gene: 119358336
Centisome position: 93.99
GC content: 50.77
Gene sequence:
>1434_bases ATGGCAAAGGTGATTATTATTGGTGCGGGTTTTGCAGGACATACTGCGGCGATGTATCTCGGTGATGCGATTGGCAGGGA TCATGAAATTACGGTTGTGCACAAGTTCGACTATTTCGGGTTCGTTCCTTCATGGGTCTGGCTGGGTATCGATGCGGTCA AGCCGGAGCATACCGTGTTCAAATTAAAGCCTATTTATGATAAGTTCAATGTGAATTTCGTACAGGGAACGGTAACTGCG GTGTATCCCGACGAGAATTATATCGTGCTCGATCAGGCTGATAACGGAGGCCTGGCGAGTCTTGAGTATGACCATCTGAT TATTGCGACCGGTGCTCATATGAATTACGATGCGACGCCGGGTCTCGGACCTAAAAAGCATACGCAGTCGATCTGTCATT TTGACAGTGCAATCCAGGCGCGCGACGCCTATCTGCAGTCGGTCGAGCGCATGAAGCGCGGCGAACGCCAGAAACTGGTG ATTGGTACCGGTCACCCACTTGCTGCCTGCCAGGGAGCTGCGTTTGAATATATCACGAATATTCATCATGATCTCTCTCA GAGAGGCATACGCGAAAAGGCTGATCTGGTCTATCTGACCAACGAGCCGGAAATAGGAGATTTTGGCGTTGGAGGCATCA ATGTTGTGACCAAAGGGGGCAGGATAGCCCGCGGCGGCGATCTTATCGAGGATGCCATGGATGAGTTCGGTATTGAAAAA GCTATTCGCAAGGGCGTTAAAGAGGTTGATGCAAACAAGGTCTACTGGGAGGATTTTGAGGGTAATTACGGTGAAACGGA GTATGATTTTGCCATGCTTATTCCTCAGTCGAGAGGGGTGACCTTCCCGTTTTACGACAGGGAGGGTAAGGATATCAGCT CAAAGGTCTGCAATCCCGGCGGCTTTGTGTTTGCCGATGGCATTTACGGTCTCAAGTACGATGAACTTGTCGGCAATGCC AACGCCTGGCCTGCGCAGTATTATAATCCGACCTACAAGAACATCTTTTCGGCAGGAATCGCTTTTGCGCCTCCCGGCCC GATTTCCGTGCCGCATACGACGAAGAACGGAACGGCTATCACGCCCGGAGCTCCCAGAACCGGTATGATTTCGGGGGTTA TCGGCAGGGTTGTCGCTTTTAACGTGATCGATATGATCAAAACCGGACGGATGACGCACCGGGAGCGGATGTCGGAAATG CTTGCGGTCTGCATCGCTTCGAACGGCAAATCTCTCTGGAGCGGTTCGGCTATTGTCATGATTATTTATCCTATCGTTCC CGATCATACCCGTTATGACAACAAGGAGGGTCGCGATATGTTCGTTACGAGGGTTGAGCGGGGAATTTCAGGCGCATGGC TGAAGCAGATGGTTGAGACGACTTTTATGCACAAGTTCATGGGCCGATTTGGATGGCAGTTCATTCCTGAATAA
Upstream 100 bases:
>100_bases TGCTTGGCTTATAAGAGTTTCATATGTTAAATTTTGCTTTAATTTATCGGAATTTTGAAGTGGCAGTAAATAACAAGCAA GAATAACCGGAGAACGTACA
Downstream 100 bases:
>100_bases CAGAGACGATATTATCAATCATTAACTATTCGATATACCATGAGGCCTACATCGTTTGACAAGTTCCTGATGCGCTGCAG GATATACCAGTTCTGGCGTT
Product: sulfide-quinone reductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; NADH Dehydrogenase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide-Quinone Oxidoreductase
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MAKVIIIGAGFAGHTAAMYLGDAIGRDHEITVVHKFDYFGFVPSWVWLGIDAVKPEHTVFKLKPIYDKFNVNFVQGTVTA VYPDENYIVLDQADNGGLASLEYDHLIIATGAHMNYDATPGLGPKKHTQSICHFDSAIQARDAYLQSVERMKRGERQKLV IGTGHPLAACQGAAFEYITNIHHDLSQRGIREKADLVYLTNEPEIGDFGVGGINVVTKGGRIARGGDLIEDAMDEFGIEK AIRKGVKEVDANKVYWEDFEGNYGETEYDFAMLIPQSRGVTFPFYDREGKDISSKVCNPGGFVFADGIYGLKYDELVGNA NAWPAQYYNPTYKNIFSAGIAFAPPGPISVPHTTKNGTAITPGAPRTGMISGVIGRVVAFNVIDMIKTGRMTHRERMSEM LAVCIASNGKSLWSGSAIVMIIYPIVPDHTRYDNKEGRDMFVTRVERGISGAWLKQMVETTFMHKFMGRFGWQFIPE
Sequences:
>Translated_477_residues MAKVIIIGAGFAGHTAAMYLGDAIGRDHEITVVHKFDYFGFVPSWVWLGIDAVKPEHTVFKLKPIYDKFNVNFVQGTVTA VYPDENYIVLDQADNGGLASLEYDHLIIATGAHMNYDATPGLGPKKHTQSICHFDSAIQARDAYLQSVERMKRGERQKLV IGTGHPLAACQGAAFEYITNIHHDLSQRGIREKADLVYLTNEPEIGDFGVGGINVVTKGGRIARGGDLIEDAMDEFGIEK AIRKGVKEVDANKVYWEDFEGNYGETEYDFAMLIPQSRGVTFPFYDREGKDISSKVCNPGGFVFADGIYGLKYDELVGNA NAWPAQYYNPTYKNIFSAGIAFAPPGPISVPHTTKNGTAITPGAPRTGMISGVIGRVVAFNVIDMIKTGRMTHRERMSEM LAVCIASNGKSLWSGSAIVMIIYPIVPDHTRYDNKEGRDMFVTRVERGISGAWLKQMVETTFMHKFMGRFGWQFIPE >Mature_476_residues AKVIIIGAGFAGHTAAMYLGDAIGRDHEITVVHKFDYFGFVPSWVWLGIDAVKPEHTVFKLKPIYDKFNVNFVQGTVTAV YPDENYIVLDQADNGGLASLEYDHLIIATGAHMNYDATPGLGPKKHTQSICHFDSAIQARDAYLQSVERMKRGERQKLVI GTGHPLAACQGAAFEYITNIHHDLSQRGIREKADLVYLTNEPEIGDFGVGGINVVTKGGRIARGGDLIEDAMDEFGIEKA IRKGVKEVDANKVYWEDFEGNYGETEYDFAMLIPQSRGVTFPFYDREGKDISSKVCNPGGFVFADGIYGLKYDELVGNAN AWPAQYYNPTYKNIFSAGIAFAPPGPISVPHTTKNGTAITPGAPRTGMISGVIGRVVAFNVIDMIKTGRMTHRERMSEML AVCIASNGKSLWSGSAIVMIIYPIVPDHTRYDNKEGRDMFVTRVERGISGAWLKQMVETTFMHKFMGRFGWQFIPE
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52780; Mature: 52649
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVIIIGAGFAGHTAAMYLGDAIGRDHEITVVHKFDYFGFVPSWVWLGIDAVKPEHTVF CCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCEEE KLKPIYDKFNVNFVQGTVTAVYPDENYIVLDQADNGGLASLEYDHLIIATGAHMNYDATP EEEECCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCEEEEEECEEEEEECCCCCCCCCC GLGPKKHTQSICHFDSAIQARDAYLQSVERMKRGERQKLVIGTGHPLAACQGAAFEYITN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHHHHH IHHDLSQRGIREKADLVYLTNEPEIGDFGVGGINVVTKGGRIARGGDLIEDAMDEFGIEK HHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHCHHH AIRKGVKEVDANKVYWEDFEGNYGETEYDFAMLIPQSRGVTFPFYDREGKDISSKVCNPG HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCEECEECCCCCCHHHHCCCCC GFVFADGIYGLKYDELVGNANAWPAQYYNPTYKNIFSAGIAFAPPGPISVPHTTKNGTAI CEEEECCCCCCCHHHHCCCCCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE TPGAPRTGMISGVIGRVVAFNVIDMIKTGRMTHRERMSEMLAVCIASNGKSLWSGSAIVM CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCEEEE IIYPIVPDHTRYDNKEGRDMFVTRVERGISGAWLKQMVETTFMHKFMGRFGWQFIPE EEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEECCC >Mature Secondary Structure AKVIIIGAGFAGHTAAMYLGDAIGRDHEITVVHKFDYFGFVPSWVWLGIDAVKPEHTVF CEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCEEE KLKPIYDKFNVNFVQGTVTAVYPDENYIVLDQADNGGLASLEYDHLIIATGAHMNYDATP EEEECCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCEEEEEECEEEEEECCCCCCCCCC GLGPKKHTQSICHFDSAIQARDAYLQSVERMKRGERQKLVIGTGHPLAACQGAAFEYITN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHHHHH IHHDLSQRGIREKADLVYLTNEPEIGDFGVGGINVVTKGGRIARGGDLIEDAMDEFGIEK HHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHCHHH AIRKGVKEVDANKVYWEDFEGNYGETEYDFAMLIPQSRGVTFPFYDREGKDISSKVCNPG HHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCEECEECCCCCCHHHHCCCCC GFVFADGIYGLKYDELVGNANAWPAQYYNPTYKNIFSAGIAFAPPGPISVPHTTKNGTAI CEEEECCCCCCCHHHHCCCCCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE TPGAPRTGMISGVIGRVVAFNVIDMIKTGRMTHRERMSEMLAVCIASNGKSLWSGSAIVM CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCEEEE IIYPIVPDHTRYDNKEGRDMFVTRVERGISGAWLKQMVETTFMHKFMGRFGWQFIPE EEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA