| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358334
Identifier: 119358334
GI number: 119358334
Start: 2940683
End: 2941279
Strand: Reverse
Name: 119358334
Synonym: Cpha266_2566
Alternate gene names: NA
Gene position: 2941279-2940683 (Counterclockwise)
Preceding gene: 119358335
Following gene: 119358328
Centisome position: 93.85
GC content: 54.1
Gene sequence:
>597_bases ATGTCGGGCTTTCTGCTTGCCGGCTGCTCGGTAGTTGGAAAGCGTAGTGCTGATGAGCCTTCGTTTACCTTGCAGAAAAA GGATGGTGTGTTTGAGGTACGACACTACGGGAGGACGGTTTATGCTGAAACGGTTGTTGATGGAGCATATGCGAAGACAA GCGGCGTGGCGTTCAGCCGTCTTGCTGGTTATATTTTTGGCAAAAACAGGGCGAAACAGAAGATCCCGATGACCGCTCCT GTTCTGCAGGAGCCGGTGAGCCTGAAAATTCCGATGACGGCTCCGGTTCTGCAGGAAAAAAAGGGCGATGGGTGGCTGAT GTCGTTTGTCATGCCTGATGGTTCACGGCTTGAAACCCTGCCGGAACCGCTCGATCCTGCCGTGAAACTTCGTGAGGCGG AGGGGAGGAGCGTAGCCGTTATCGGGTATGCGGGGCTGCATTCGGAAAAAAATATCCGGAAGTATGCCGGGCTACTGAAG GAGTGGATCGGTAAAAAAGGGTATCGGGCGATTTCCGAGCCTCGGGCGGCAAGTTACGATCCGCCATGGACGATTCCTTT TTTGCGCCGTAACGAGGTGCAGATCGACGTTGAGTGA
Upstream 100 bases:
>100_bases AGTAGGAAATCATTGCAAAATGACGTAATCTGAAGCCGCTGCCTGGGTGATTGCTAATTTCCGAAATTGGCTGATTTTTA ATTTCCGACTACAGGTGCTG
Downstream 100 bases:
>100_bases GGGCTCTCCGTCAACGCCTGGCTGTTGACGGGGGTTGTCAATTCTTGACGCAGCGGACTGAAAAGCCGGTGTTTTTGCTT GCTTTTCCTTTTCGCAGTGC
Product: SOUL heme-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSGFLLAGCSVVGKRSADEPSFTLQKKDGVFEVRHYGRTVYAETVVDGAYAKTSGVAFSRLAGYIFGKNRAKQKIPMTAP VLQEPVSLKIPMTAPVLQEKKGDGWLMSFVMPDGSRLETLPEPLDPAVKLREAEGRSVAVIGYAGLHSEKNIRKYAGLLK EWIGKKGYRAISEPRAASYDPPWTIPFLRRNEVQIDVE
Sequences:
>Translated_198_residues MSGFLLAGCSVVGKRSADEPSFTLQKKDGVFEVRHYGRTVYAETVVDGAYAKTSGVAFSRLAGYIFGKNRAKQKIPMTAP VLQEPVSLKIPMTAPVLQEKKGDGWLMSFVMPDGSRLETLPEPLDPAVKLREAEGRSVAVIGYAGLHSEKNIRKYAGLLK EWIGKKGYRAISEPRAASYDPPWTIPFLRRNEVQIDVE >Mature_197_residues SGFLLAGCSVVGKRSADEPSFTLQKKDGVFEVRHYGRTVYAETVVDGAYAKTSGVAFSRLAGYIFGKNRAKQKIPMTAPV LQEPVSLKIPMTAPVLQEKKGDGWLMSFVMPDGSRLETLPEPLDPAVKLREAEGRSVAVIGYAGLHSEKNIRKYAGLLKE WIGKKGYRAISEPRAASYDPPWTIPFLRRNEVQIDVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21860; Mature: 21728
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFLLAGCSVVGKRSADEPSFTLQKKDGVFEVRHYGRTVYAETVVDGAYAKTSGVAFSR CCCEEEECCCEECCCCCCCCCEEEECCCCEEEEHHCCCEEEEHHHHCCCHHCCCCCHHHH LAGYIFGKNRAKQKIPMTAPVLQEPVSLKIPMTAPVLQEKKGDGWLMSFVMPDGSRLETL HHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCHHHHCCCCCCEEEEEECCCCCCCCCC PEPLDPAVKLREAEGRSVAVIGYAGLHSEKNIRKYAGLLKEWIGKKGYRAISEPRAASYD CCCCCCHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC PPWTIPFLRRNEVQIDVE CCCCCEEEECCEEEEEEC >Mature Secondary Structure SGFLLAGCSVVGKRSADEPSFTLQKKDGVFEVRHYGRTVYAETVVDGAYAKTSGVAFSR CCEEEECCCEECCCCCCCCCEEEECCCCEEEEHHCCCEEEEHHHHCCCHHCCCCCHHHH LAGYIFGKNRAKQKIPMTAPVLQEPVSLKIPMTAPVLQEKKGDGWLMSFVMPDGSRLETL HHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCHHHHCCCCCCEEEEEECCCCCCCCCC PEPLDPAVKLREAEGRSVAVIGYAGLHSEKNIRKYAGLLKEWIGKKGYRAISEPRAASYD CCCCCCHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC PPWTIPFLRRNEVQIDVE CCCCCEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA