| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358322
Identifier: 119358322
GI number: 119358322
Start: 2930412
End: 2931353
Strand: Direct
Name: 119358322
Synonym: Cpha266_2554
Alternate gene names: NA
Gene position: 2930412-2931353 (Clockwise)
Preceding gene: 119358319
Following gene: 119358324
Centisome position: 93.51
GC content: 50.74
Gene sequence:
>942_bases ATGAAAAAAAACATTTCCATCGCATTATTGACAATGGCGCTGCTCGTGCAGGCGGCGATCCTCCTCACACCGCATCATAA TACGCTCTACGCGGAAAATAAGAAAATCATTCTCCGCAACGCCGACATCATCGAAGGAGGCCAGCTTGACGGAGCATCGT CGCCCGACAAGCAGTTCCGTTCGGTAATCGGAAACGTAATCTTCGAGCACAACAACATGACCCTGCAGTGCGACCGGGCC ACCGAATACCCCGGAGAGAATCGCATTACCCTTACGGGAAACATCACCATCACCGGTAACGACCTTGAAATCCATGCCGA CAACGGAATCTACCATCCCGATACCGAAATCGGTGAACTCACCGGCAACGTTCGGGGAAGAATGATCAGCAGCAACCATG CAGCAAAAGCAAAGAAAGCCATTCTCAATAACAGGACAAACCAGCTCTGGCTGTATGAAGACGCCATTGCATGGGGCGCT GACCAGCAGATCAGCGGCGATATCATACTGGTACATCTCAAAGAAACCGCAAAAGGAGGCAAACGCCGCATTGACGAAGT GCAGGTACACCGAAACGCATTTTTTGCGGCAAAAGACACCCTCTCCGGCACCCCGCAGCTTTTCGATCAGCTTTCAGGCA AAAAAATGGTCATCAGAATGAACGACCGCTCAAAAATCTCGGGAGTTACCGTAACCGATCAGGCAGAAAGCCTCTACCAT CTCTATGACGAAAACCGTCAACCCTCGGGAATCAACTACTCGAGCGGCAACATCATCAGGATGCTCTTCCGCGACGGCCA TCTGGTGCGAGTCAACGTAACCGGCAACGTCGAGGGAAAACAGTACCCTGTTTCATACCGAGGCGATACAAGCCTTAACC TCATCGGTTTTGCATGGAGAGAACATGAAAACCCCTTCAAAAACAAAAAAAGCCTTCCCTGA
Upstream 100 bases:
>100_bases TCGAAAATACCGACAGCTCCGAACTGATTACAAGCATCGCCAAAGCGAAGCGATCAGATCGTCAAACAGGTTTAACAGCA GAGCCCGCTACTTGCAGCCA
Downstream 100 bases:
>100_bases CAGGAAAGGCTTTTCGAGAGCAGATCGACTCATATACTTTTCGCAAACAGATCACCTCACTTCGCAAAAGGACAGGTGCC TGTTGAACAGGAACCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKKNISIALLTMALLVQAAILLTPHHNTLYAENKKIILRNADIIEGGQLDGASSPDKQFRSVIGNVIFEHNNMTLQCDRA TEYPGENRITLTGNITITGNDLEIHADNGIYHPDTEIGELTGNVRGRMISSNHAAKAKKAILNNRTNQLWLYEDAIAWGA DQQISGDIILVHLKETAKGGKRRIDEVQVHRNAFFAAKDTLSGTPQLFDQLSGKKMVIRMNDRSKISGVTVTDQAESLYH LYDENRQPSGINYSSGNIIRMLFRDGHLVRVNVTGNVEGKQYPVSYRGDTSLNLIGFAWREHENPFKNKKSLP
Sequences:
>Translated_313_residues MKKNISIALLTMALLVQAAILLTPHHNTLYAENKKIILRNADIIEGGQLDGASSPDKQFRSVIGNVIFEHNNMTLQCDRA TEYPGENRITLTGNITITGNDLEIHADNGIYHPDTEIGELTGNVRGRMISSNHAAKAKKAILNNRTNQLWLYEDAIAWGA DQQISGDIILVHLKETAKGGKRRIDEVQVHRNAFFAAKDTLSGTPQLFDQLSGKKMVIRMNDRSKISGVTVTDQAESLYH LYDENRQPSGINYSSGNIIRMLFRDGHLVRVNVTGNVEGKQYPVSYRGDTSLNLIGFAWREHENPFKNKKSLP >Mature_313_residues MKKNISIALLTMALLVQAAILLTPHHNTLYAENKKIILRNADIIEGGQLDGASSPDKQFRSVIGNVIFEHNNMTLQCDRA TEYPGENRITLTGNITITGNDLEIHADNGIYHPDTEIGELTGNVRGRMISSNHAAKAKKAILNNRTNQLWLYEDAIAWGA DQQISGDIILVHLKETAKGGKRRIDEVQVHRNAFFAAKDTLSGTPQLFDQLSGKKMVIRMNDRSKISGVTVTDQAESLYH LYDENRQPSGINYSSGNIIRMLFRDGHLVRVNVTGNVEGKQYPVSYRGDTSLNLIGFAWREHENPFKNKKSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34946; Mature: 34946
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNISIALLTMALLVQAAILLTPHHNTLYAENKKIILRNADIIEGGQLDGASSPDKQFR CCCCEEHHHHHHHHHHHEEEEECCCCCEEEECCCEEEEECCCEEECCCCCCCCCCHHHHH SVIGNVIFEHNNMTLQCDRATEYPGENRITLTGNITITGNDLEIHADNGIYHPDTEIGEL HHHHHHEEECCCEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEECCCEECCCCCHHHH TGNVRGRMISSNHAAKAKKAILNNRTNQLWLYEDAIAWGADQQISGDIILVHLKETAKGG CCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEHHEECCCCCCCCCCEEEEEEHHHCCCC KRRIDEVQVHRNAFFAAKDTLSGTPQLFDQLSGKKMVIRMNDRSKISGVTVTDQAESLYH HHCHHHHEEHHCEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEECCHHHHHH LYDENRQPSGINYSSGNIIRMLFRDGHLVRVNVTGNVEGKQYPVSYRGDTSLNLIGFAWR HHCCCCCCCCCEECCCCEEEEEECCCCEEEEEEEECCCCCEECEEECCCCCEEEEEEEEE EHENPFKNKKSLP CCCCCCCCCCCCC >Mature Secondary Structure MKKNISIALLTMALLVQAAILLTPHHNTLYAENKKIILRNADIIEGGQLDGASSPDKQFR CCCCEEHHHHHHHHHHHEEEEECCCCCEEEECCCEEEEECCCEEECCCCCCCCCCHHHHH SVIGNVIFEHNNMTLQCDRATEYPGENRITLTGNITITGNDLEIHADNGIYHPDTEIGEL HHHHHHEEECCCEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEECCCEECCCCCHHHH TGNVRGRMISSNHAAKAKKAILNNRTNQLWLYEDAIAWGADQQISGDIILVHLKETAKGG CCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEHHEECCCCCCCCCCEEEEEEHHHCCCC KRRIDEVQVHRNAFFAAKDTLSGTPQLFDQLSGKKMVIRMNDRSKISGVTVTDQAESLYH HHCHHHHEEHHCEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEECCHHHHHH LYDENRQPSGINYSSGNIIRMLFRDGHLVRVNVTGNVEGKQYPVSYRGDTSLNLIGFAWR HHCCCCCCCCCEECCCCEEEEEECCCCEEEEEEEECCCCCEECEEECCCCCEEEEEEEEE EHENPFKNKKSLP CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA