| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358303
Identifier: 119358303
GI number: 119358303
Start: 2907264
End: 2907929
Strand: Reverse
Name: 119358303
Synonym: Cpha266_2535
Alternate gene names: NA
Gene position: 2907929-2907264 (Counterclockwise)
Preceding gene: 119358304
Following gene: 119358302
Centisome position: 92.79
GC content: 56.01
Gene sequence:
>666_bases ATGCAGAGTTTTTTTATGCAGACAATGGTGAGCGGGCGCTATCTGCTTCGTCCATCCGCTCATTCCGCTCAAGCCCCGCT TTTGGCGGGGTTTCACGGTTACGGCCAGACTGCCGAAGATGAGCTTTTGCTGCTCTCTGCGATTCCTGGCGCCGAATATT GGCACTGCTGCTCTATTGAAGCCCTTCATCCTTTCTACCCATCCAGAGGCGTATCCGGCGCAAGCTGGATGACCAGTCTG CAGAGGGATCAGCGCATAGAAGAAAATGTGCGCTATGTCGATGCGGTCGTTGATGCGCTCAATGTGGAGTTGTCCGTGAG CGATAAGCTTGTTTTTCATGGTTTTTCTCAGGGAGCAGGCATGGCTTGCCGGGCTGCGATTCTTGGCAGCCATCCGGGCA GCGGGCTCATGCTTCTTGGTGGAGATATACCTCCCGAGCTTGCTCTGCTTGAGCGTATGGGCAGGGCTCATATTGCGCGG GGGAGCCGTGACCGGTTCTATACAGCAGAGCGTTACGACAGGGATGTCGCGCGTATGTCCGATGCCGGTGTTCAGGTTAC CGCTACGCTGTTCACCGGCGATCATGGCGCGAATGAAGAGTACTTTGATGCCGCGGGCCGTTTTTTGCGTGGTTGGCGAT CGATAGTCGGCTCGGACCTCTGTTGA
Upstream 100 bases:
>100_bases ATTTTGAGGATGCTTGAGTGACCCGATGGCGGCAAGGGGCCGGTCTGCCATGAGCACGGCAGACCGGATGGTTTACAGTT GCTGATTTGTTTATGGAGCT
Downstream 100 bases:
>100_bases TTGTTTCGGGTTGTTCTTCAGGAGCCTCTCTGATTGGCGATTTCCGCAGAAAATGCCCTTGCGCCCGCTCTCTCCGTGTT GTTATGATGAAGGTAAGAGG
Product: phospholipase/carboxylesterase
Products: NA
Alternate protein names: Esterase/Lipase
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQSFFMQTMVSGRYLLRPSAHSAQAPLLAGFHGYGQTAEDELLLLSAIPGAEYWHCCSIEALHPFYPSRGVSGASWMTSL QRDQRIEENVRYVDAVVDALNVELSVSDKLVFHGFSQGAGMACRAAILGSHPGSGLMLLGGDIPPELALLERMGRAHIAR GSRDRFYTAERYDRDVARMSDAGVQVTATLFTGDHGANEEYFDAAGRFLRGWRSIVGSDLC
Sequences:
>Translated_221_residues MQSFFMQTMVSGRYLLRPSAHSAQAPLLAGFHGYGQTAEDELLLLSAIPGAEYWHCCSIEALHPFYPSRGVSGASWMTSL QRDQRIEENVRYVDAVVDALNVELSVSDKLVFHGFSQGAGMACRAAILGSHPGSGLMLLGGDIPPELALLERMGRAHIAR GSRDRFYTAERYDRDVARMSDAGVQVTATLFTGDHGANEEYFDAAGRFLRGWRSIVGSDLC >Mature_221_residues MQSFFMQTMVSGRYLLRPSAHSAQAPLLAGFHGYGQTAEDELLLLSAIPGAEYWHCCSIEALHPFYPSRGVSGASWMTSL QRDQRIEENVRYVDAVVDALNVELSVSDKLVFHGFSQGAGMACRAAILGSHPGSGLMLLGGDIPPELALLERMGRAHIAR GSRDRFYTAERYDRDVARMSDAGVQVTATLFTGDHGANEEYFDAAGRFLRGWRSIVGSDLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24178; Mature: 24178
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSFFMQTMVSGRYLLRPSAHSAQAPLLAGFHGYGQTAEDELLLLSAIPGAEYWHCCSIE CCHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCC ALHPFYPSRGVSGASWMTSLQRDQRIEENVRYVDAVVDALNVELSVSDKLVFHGFSQGAG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCCCCCC MACRAAILGSHPGSGLMLLGGDIPPELALLERMGRAHIARGSRDRFYTAERYDRDVARMS HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHC DAGVQVTATLFTGDHGANEEYFDAAGRFLRGWRSIVGSDLC CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQSFFMQTMVSGRYLLRPSAHSAQAPLLAGFHGYGQTAEDELLLLSAIPGAEYWHCCSIE CCHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCC ALHPFYPSRGVSGASWMTSLQRDQRIEENVRYVDAVVDALNVELSVSDKLVFHGFSQGAG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCCCCCC MACRAAILGSHPGSGLMLLGGDIPPELALLERMGRAHIARGSRDRFYTAERYDRDVARMS HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHC DAGVQVTATLFTGDHGANEEYFDAAGRFLRGWRSIVGSDLC CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA