| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358302
Identifier: 119358302
GI number: 119358302
Start: 2905987
End: 2907069
Strand: Reverse
Name: 119358302
Synonym: Cpha266_2534
Alternate gene names: NA
Gene position: 2907069-2905987 (Counterclockwise)
Preceding gene: 119358303
Following gene: 119358301
Centisome position: 92.76
GC content: 47.18
Gene sequence:
>1083_bases ATGCGATTTCAATGGCGTTTTGTCTCTTTTCTGGTTTTGGTTTTTCTTTTTGCCGGATGTACGGCTACCAGCTCTCTTGT TCAACGTCAAACCATCAGGGTGTTTTATGCGACCGATCGCGCCCTTAATGGGCAGTCCGATCATTCTGAGCTGTATGGCG GGGAACGGGGCGCGGTGACCTATGGGGTTTGCGAGGTGGGTATTTCGCAGGGGCACGGTATTGCTGAACCTGATATGAGA TTGTACGGGGAGCCCGACCGGAAAAATCCTGATTCGGATGCTGAGTTGCAGGCTGTCAATCTTATATGCGAAATGGATTT TTTTTCTGAACTTGATCGCAGCGTCAAGGGGTCGCCGTCAGGTGATTTGCTGCTTTTTGTTCATGGTTACAACCTGACTT TTGAAAAAGCAGCTCTGAATACAGCACTGCTTTTCTGCGATCTTGGCTTCAATGGAGCTCCGTTGTTCTATAGTTGGCCG TCACGTGGATCGATCAGCAAGTATGCTATCGATGAAACTAATATCGAATGGTCTCAGCCTGACCTGAAAAGGTTTCTTGA AGCTGTTGCCAGAAGGTCTGGAGCGAAGGATATTTATTTGATGGCCCACAGTCTGGGAAATCGAGCTATGACTAAAGCGT TGATCGAACTGCTTCAGGAGCAGCCTCAACTGAAAAACCGGTTCAAGGCGCTGATTCTTATGGCTCCCGACATTGATGCG GAAATTTTTAAACGAGATATCGCCCCGAAACTTACCGATACAGGAGCCTTTGTAACGCTCTATGCTTCATGCGATGATAA GGCGCTGCAACTTTCAACAGACGTGCATGGGTATATGAGGGCAGGGGATATCTCGCAACGTTCGCTTCTTGTGCCGGGTA TCGAAATTATCGATGTAACCAGTGTCGATACCGGTTTTTTTGGACATTCATACTACAAGGGTTCGCGACTGGTTCTCAGG GATCTCGCTTTTCTTATAAACAGGGGATTTCATGCCAATGATCGCTTGTCTCTTGAGCCGATAGATTTGCCCCAGGGTCG TTTTTGGAGGATAAAAAAAGATGTAAAGCATGCTTTGCCTTAA
Upstream 100 bases:
>100_bases AAGAGGAGTGTGTCGTTACTCTCCGGTTCGGAATTTCGAGTATCGCTTGTACCTGCTTTTTTGTGGATATAACTGGAAAA CTATGGTTTCGATCTGAGCT
Downstream 100 bases:
>100_bases AGTTTCCTTCAGGGCTGCTGGTTTCTGCCATTGTTATTCTGCTCTGGAAGGTTATGGTTTTTATTGCTTTGAATACGGGG TGTTGTTCCGGGCAATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MRFQWRFVSFLVLVFLFAGCTATSSLVQRQTIRVFYATDRALNGQSDHSELYGGERGAVTYGVCEVGISQGHGIAEPDMR LYGEPDRKNPDSDAELQAVNLICEMDFFSELDRSVKGSPSGDLLLFVHGYNLTFEKAALNTALLFCDLGFNGAPLFYSWP SRGSISKYAIDETNIEWSQPDLKRFLEAVARRSGAKDIYLMAHSLGNRAMTKALIELLQEQPQLKNRFKALILMAPDIDA EIFKRDIAPKLTDTGAFVTLYASCDDKALQLSTDVHGYMRAGDISQRSLLVPGIEIIDVTSVDTGFFGHSYYKGSRLVLR DLAFLINRGFHANDRLSLEPIDLPQGRFWRIKKDVKHALP
Sequences:
>Translated_360_residues MRFQWRFVSFLVLVFLFAGCTATSSLVQRQTIRVFYATDRALNGQSDHSELYGGERGAVTYGVCEVGISQGHGIAEPDMR LYGEPDRKNPDSDAELQAVNLICEMDFFSELDRSVKGSPSGDLLLFVHGYNLTFEKAALNTALLFCDLGFNGAPLFYSWP SRGSISKYAIDETNIEWSQPDLKRFLEAVARRSGAKDIYLMAHSLGNRAMTKALIELLQEQPQLKNRFKALILMAPDIDA EIFKRDIAPKLTDTGAFVTLYASCDDKALQLSTDVHGYMRAGDISQRSLLVPGIEIIDVTSVDTGFFGHSYYKGSRLVLR DLAFLINRGFHANDRLSLEPIDLPQGRFWRIKKDVKHALP >Mature_360_residues MRFQWRFVSFLVLVFLFAGCTATSSLVQRQTIRVFYATDRALNGQSDHSELYGGERGAVTYGVCEVGISQGHGIAEPDMR LYGEPDRKNPDSDAELQAVNLICEMDFFSELDRSVKGSPSGDLLLFVHGYNLTFEKAALNTALLFCDLGFNGAPLFYSWP SRGSISKYAIDETNIEWSQPDLKRFLEAVARRSGAKDIYLMAHSLGNRAMTKALIELLQEQPQLKNRFKALILMAPDIDA EIFKRDIAPKLTDTGAFVTLYASCDDKALQLSTDVHGYMRAGDISQRSLLVPGIEIIDVTSVDTGFFGHSYYKGSRLVLR DLAFLINRGFHANDRLSLEPIDLPQGRFWRIKKDVKHALP
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40339; Mature: 40339
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFQWRFVSFLVLVFLFAGCTATSSLVQRQTIRVFYATDRALNGQSDHSELYGGERGAVT CCEEHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHCCCCCCCEE YGVCEVGISQGHGIAEPDMRLYGEPDRKNPDSDAELQAVNLICEMDFFSELDRSVKGSPS EEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEHHEECHHHHHHHHHHCCCCCC GDLLLFVHGYNLTFEKAALNTALLFCDLGFNGAPLFYSWPSRGSISKYAIDETNIEWSQP CCEEEEEECCCCEEHHHHHCEEEEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCCCH DLKRFLEAVARRSGAKDIYLMAHSLGNRAMTKALIELLQEQPQLKNRFKALILMAPDIDA HHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHHCHHHHHHCEEEEEECCCCCH EIFKRDIAPKLTDTGAFVTLYASCDDKALQLSTDVHGYMRAGDISQRSLLVPGIEIIDVT HHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHCCCCCCCCEEECCCEEEEEEE SVDTGFFGHSYYKGSRLVLRDLAFLINRGFHANDRLSLEPIDLPQGRFWRIKKDVKHALP ECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEHHHHHHCCC >Mature Secondary Structure MRFQWRFVSFLVLVFLFAGCTATSSLVQRQTIRVFYATDRALNGQSDHSELYGGERGAVT CCEEHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHCCCCCCCEE YGVCEVGISQGHGIAEPDMRLYGEPDRKNPDSDAELQAVNLICEMDFFSELDRSVKGSPS EEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEHHEECHHHHHHHHHHCCCCCC GDLLLFVHGYNLTFEKAALNTALLFCDLGFNGAPLFYSWPSRGSISKYAIDETNIEWSQP CCEEEEEECCCCEEHHHHHCEEEEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCCCH DLKRFLEAVARRSGAKDIYLMAHSLGNRAMTKALIELLQEQPQLKNRFKALILMAPDIDA HHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHHCHHHHHHCEEEEEECCCCCH EIFKRDIAPKLTDTGAFVTLYASCDDKALQLSTDVHGYMRAGDISQRSLLVPGIEIIDVT HHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHCCCCCCCCEEECCCEEEEEEE SVDTGFFGHSYYKGSRLVLRDLAFLINRGFHANDRLSLEPIDLPQGRFWRIKKDVKHALP ECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA