| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358301
Identifier: 119358301
GI number: 119358301
Start: 2905145
End: 2905726
Strand: Reverse
Name: 119358301
Synonym: Cpha266_2533
Alternate gene names: NA
Gene position: 2905726-2905145 (Counterclockwise)
Preceding gene: 119358302
Following gene: 119358300
Centisome position: 92.72
GC content: 48.97
Gene sequence:
>582_bases ATGCGAAAAATATCGACAGCTCTGGCTGTTGCGCTTATGATTGTTTCCGGAGTTATCGGAATTGGTATCGGTTACTGGTT GACTCCGCAGTATTCTCTTTCCATGTATGAGAAGGGTACCATGGATCTTGGCGAGCCTGACAGGTGGATCGATCTGAGGT ATATGGACGCAATGATTTCTCATCATCGGGAAGCAGTGCTTCTTGCCGAAGAGGCCGCCATAAGCGAAAGACCGGAAATC AGAGCGTTGACTGGAGAGATTCTGAAAAATGAGCCGTTGGCGATAGGGGAATTATATCGCTGGAAAAAAGAGTGGTATGG TGACGTCAGGATGGTTCGCGATCCACGCGTGCCTCGTTTGGGCAGTTACGACAGGACGTTTGATCTTCGTTTTCTCAATG CCATGATTGCTCATCATGAAGCCGGCATCAGGATGACAGGAGAGATTCGTCTGAAGTCGAGCCGTTCTGCTATTCTCGAT AATGCCGACGATGTTGAGCAGTTTTTTCATGAGGGACTCGGTATGTTCAGGGCATGGAGAACGTCATGGTACTCTGTCAG GGAGAGGAAACCGGAGCTATGA
Upstream 100 bases:
>100_bases TGTTTTTCGTGAAAATCGTGGAGCGTGGTTGATGTGAGGCTATGGGTCTTGCTCTGCAAGGTTCGCTGGGAAGGTGATCA TAAAAAAAAGAGTTGAAATC
Downstream 100 bases:
>100_bases CGACCAGAACCTATTCGGTTAAGGGAATGCATTGCGCCAGTTGTGCTGCGATCATTACGAAAAAACTCTCTAAAGTTGAA GGGATCAGCCAGGTTGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MRKISTALAVALMIVSGVIGIGIGYWLTPQYSLSMYEKGTMDLGEPDRWIDLRYMDAMISHHREAVLLAEEAAISERPEI RALTGEILKNEPLAIGELYRWKKEWYGDVRMVRDPRVPRLGSYDRTFDLRFLNAMIAHHEAGIRMTGEIRLKSSRSAILD NADDVEQFFHEGLGMFRAWRTSWYSVRERKPEL
Sequences:
>Translated_193_residues MRKISTALAVALMIVSGVIGIGIGYWLTPQYSLSMYEKGTMDLGEPDRWIDLRYMDAMISHHREAVLLAEEAAISERPEI RALTGEILKNEPLAIGELYRWKKEWYGDVRMVRDPRVPRLGSYDRTFDLRFLNAMIAHHEAGIRMTGEIRLKSSRSAILD NADDVEQFFHEGLGMFRAWRTSWYSVRERKPEL >Mature_193_residues MRKISTALAVALMIVSGVIGIGIGYWLTPQYSLSMYEKGTMDLGEPDRWIDLRYMDAMISHHREAVLLAEEAAISERPEI RALTGEILKNEPLAIGELYRWKKEWYGDVRMVRDPRVPRLGSYDRTFDLRFLNAMIAHHEAGIRMTGEIRLKSSRSAILD NADDVEQFFHEGLGMFRAWRTSWYSVRERKPEL
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22363; Mature: 22363
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKISTALAVALMIVSGVIGIGIGYWLTPQYSLSMYEKGTMDLGEPDRWIDLRYMDAMIS CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCEEHHHHHHHHHH HHREAVLLAEEAAISERPEIRALTGEILKNEPLAIGELYRWKKEWYGDVRMVRDPRVPRL CCHHHEEEHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCC GSYDRTFDLRFLNAMIAHHEAGIRMTGEIRLKSSRSAILDNADDVEQFFHEGLGMFRAWR CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHH TSWYSVRERKPEL HHHHHHHHCCCCC >Mature Secondary Structure MRKISTALAVALMIVSGVIGIGIGYWLTPQYSLSMYEKGTMDLGEPDRWIDLRYMDAMIS CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCEEHHHHHHHHHH HHREAVLLAEEAAISERPEIRALTGEILKNEPLAIGELYRWKKEWYGDVRMVRDPRVPRL CCHHHEEEHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCC GSYDRTFDLRFLNAMIAHHEAGIRMTGEIRLKSSRSAILDNADDVEQFFHEGLGMFRAWR CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHH TSWYSVRERKPEL HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA