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The map label for this gene is 119358297

Identifier: 119358297

GI number: 119358297

Start: 2893871

End: 2894602

Strand: Direct

Name: 119358297

Synonym: Cpha266_2529

Alternate gene names: NA

Gene position: 2893871-2894602 (Clockwise)

Preceding gene: 119358296

Following gene: 119358298

Centisome position: 92.34

GC content: 42.49

Gene sequence:

>732_bases
ATGAATAAACCAATCCGTTTTCTTTTTCTTTTACTTTGCCTGATGTTGTTCGCAGAGAGTCCGGTTTATGCGAAAAGTTT
TAAAAGTATAATGCTGCAAGCTGAAGAACAGCTTGACAAAGGTGATTATAAAAGCGCTATAACATTCTTTACAAAGGCAA
TAGAGCTTGATCCCCAATCTATCGAAGCATACAACAGCCGAGGATCTGCAAAAGCCAAATCAGGCGATTATCCTGATGCC
ATTGAGGACTTCAGCATCGCAATTGAACTTGATCCGAATGCTGCAGAAGCATACTACAACCGAGCTGCCGCAAAAGCATC
CATCGAAGATCACAAGGGAGCCAGAGAGGACAGAAAAATGGCCATGAAACTCGACCCGAAATTATCTTTGGTTTATGACA
ACAGAGGTCTTATAAAATATCTCAGGGATAATTACCAGGGAGCGATTGATAACTTTACCACGGCTCTTGAGCTTGACCCG
AAATCAGCCATCGCATACAAACACCGTGGATATGCAAAACATGAGATGAAAGATTACCAGGGAGCAATAGAGGATTACAC
CTCTGCCCTTACTTTTGATGCCAAACTTGCCGATGTCTATTGGAATCGCGCTCTGGCAAAGAGCCAGGTTGAGGATAATG
AGGGAGCAATAAAGGATTATAAAAAAGCGGCTAAACTTGGAAATATCAGCGCTCAAAACTGGCTGAAAGAAAATCTCGGT
GAGGAGGAATAG

Upstream 100 bases:

>100_bases
TAAGGCGTATCACGGCTTCTGCGCATAACGTTGTATAAAAAAACGGGGGCTTGCAAGACATAAACCCCCCGCACGAAAAA
CCATCAAACTCTTTCCGTCA

Downstream 100 bases:

>100_bases
GGGCAAGATTGTATTACATGGGAATGAAGAGGAAGAGTTTGCCCACGAATTGACACGAATTTTCACGAAAAGAGAATTAA
GGCTGTTTGTTGTTTCCGCT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNKPIRFLFLLLCLMLFAESPVYAKSFKSIMLQAEEQLDKGDYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDA
IEDFSIAIELDPNAAEAYYNRAAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDP
KSAIAYKHRGYAKHEMKDYQGAIEDYTSALTFDAKLADVYWNRALAKSQVEDNEGAIKDYKKAAKLGNISAQNWLKENLG
EEE

Sequences:

>Translated_243_residues
MNKPIRFLFLLLCLMLFAESPVYAKSFKSIMLQAEEQLDKGDYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDA
IEDFSIAIELDPNAAEAYYNRAAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDP
KSAIAYKHRGYAKHEMKDYQGAIEDYTSALTFDAKLADVYWNRALAKSQVEDNEGAIKDYKKAAKLGNISAQNWLKENLG
EEE
>Mature_243_residues
MNKPIRFLFLLLCLMLFAESPVYAKSFKSIMLQAEEQLDKGDYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDA
IEDFSIAIELDPNAAEAYYNRAAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDP
KSAIAYKHRGYAKHEMKDYQGAIEDYTSALTFDAKLADVYWNRALAKSQVEDNEGAIKDYKKAAKLGNISAQNWLKENLG
EEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI310131789, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI310110582, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI310123097, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI32307150, Length=188, Percent_Identity=27.1276595744681, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI32307148, Length=188, Percent_Identity=27.1276595744681, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI170784867, Length=201, Percent_Identity=25.8706467661692, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=196, Percent_Identity=28.0612244897959, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=177, Percent_Identity=27.683615819209, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 27429; Mature: 27429

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPIRFLFLLLCLMLFAESPVYAKSFKSIMLQAEEQLDKGDYKSAITFFTKAIELDPQS
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
IEAYNSRGSAKAKSGDYPDAIEDFSIAIELDPNAAEAYYNRAAAKASIEDHKGAREDRKM
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHCCCCHHHHH
AMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDPKSAIAYKHRGYAKHEMKDYQ
HHEECCCEEEEECCCHHHHHHHHCCCCCHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHH
GAIEDYTSALTFDAKLADVYWNRALAKSQVEDNEGAIKDYKKAAKLGNISAQNWLKENLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC
EEE
CCC
>Mature Secondary Structure
MNKPIRFLFLLLCLMLFAESPVYAKSFKSIMLQAEEQLDKGDYKSAITFFTKAIELDPQS
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
IEAYNSRGSAKAKSGDYPDAIEDFSIAIELDPNAAEAYYNRAAAKASIEDHKGAREDRKM
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHCCCCHHHHH
AMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDPKSAIAYKHRGYAKHEMKDYQ
HHEECCCEEEEECCCHHHHHHHHCCCCCHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHH
GAIEDYTSALTFDAKLADVYWNRALAKSQVEDNEGAIKDYKKAAKLGNISAQNWLKENLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC
EEE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]