| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358295
Identifier: 119358295
GI number: 119358295
Start: 2891016
End: 2891795
Strand: Reverse
Name: 119358295
Synonym: Cpha266_2527
Alternate gene names: NA
Gene position: 2891795-2891016 (Counterclockwise)
Preceding gene: 119358300
Following gene: 119358294
Centisome position: 92.27
GC content: 42.69
Gene sequence:
>780_bases ATGAGCTTTACTGGCAAAGTGTTTTCCGAACCCATTTCTTCTACTCCCGCAATCGGTGAAACGGTTATCCTATCTGTTCA TACCTCACAAAACAAAATAATATGGCCAAACCGTGCCGCAAAATCACTTACGACTCCATCTGGATGGGGCGCATCATGGG GAGTTATCTTTGTCGGTGCTGGTATAACGGATCCTGCAGCTTATAGTACAGAACCGGATGTGGCGATAAGTTTTGGTATG GGATTAGGGAATCCGGTTACCAATCTTGGTATTCAGCTCAGTCCTACAATCTGGGATGTCAGCAAATTCGATAATTTTTC CTTAAGCTGCAAAGTCCATCGTTATCTGGGGAAAGCTACTTCGCTTGCTATTGGCGGTGAAAATCTTTTTGCCGACAAGA AAAAAACGGATACGGGTGAAAGTTATTACATCGTTATCAGTCACGCTTTTCAGAATGTTCATTCACATAATCCTGATGTA TCCGCATTACATGCAAGCTTTGGTATTGGTTCAGGGCGATTTGATGAGAAAAGCCCTCTTGACATACAGTCAGGTAAAGG GCGATATGGTACCTATGTGTTTGGTTCACTCGCTTATGAGATTTTCCCGTCAGCAAATATAGTGATCGATTGGAATGGTT TAAATCTGAGTGCGGGAGTTGCCTTATCTCCGTTTCAGAAGATTCCTGTCGGCATGACTCTTGGTGTAGCCGATATAACA AACTACTCTGGTGACAGGTTACGTTTTATTGCATCAGTTGGTTATGCCTATCAATTTTAA
Upstream 100 bases:
>100_bases ATTTTTTATCAGGATTTTTATAAGAATCGTAAAACTCAATTCTTGTGAAAAAACCGTGTGCAAAATACGTCGCTCATGTA GTATCGCGCTGTGTTTTTTC
Downstream 100 bases:
>100_bases CAGGTGATCAATATGAACACCTTGAAAAAAATATTTTCCGTTTTTCTATTGTTTTCGTTTCTGCTGGAGCTTATCCCTGT ATCAGCATATGCGGATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSFTGKVFSEPISSTPAIGETVILSVHTSQNKIIWPNRAAKSLTTPSGWGASWGVIFVGAGITDPAAYSTEPDVAISFGM GLGNPVTNLGIQLSPTIWDVSKFDNFSLSCKVHRYLGKATSLAIGGENLFADKKKTDTGESYYIVISHAFQNVHSHNPDV SALHASFGIGSGRFDEKSPLDIQSGKGRYGTYVFGSLAYEIFPSANIVIDWNGLNLSAGVALSPFQKIPVGMTLGVADIT NYSGDRLRFIASVGYAYQF
Sequences:
>Translated_259_residues MSFTGKVFSEPISSTPAIGETVILSVHTSQNKIIWPNRAAKSLTTPSGWGASWGVIFVGAGITDPAAYSTEPDVAISFGM GLGNPVTNLGIQLSPTIWDVSKFDNFSLSCKVHRYLGKATSLAIGGENLFADKKKTDTGESYYIVISHAFQNVHSHNPDV SALHASFGIGSGRFDEKSPLDIQSGKGRYGTYVFGSLAYEIFPSANIVIDWNGLNLSAGVALSPFQKIPVGMTLGVADIT NYSGDRLRFIASVGYAYQF >Mature_258_residues SFTGKVFSEPISSTPAIGETVILSVHTSQNKIIWPNRAAKSLTTPSGWGASWGVIFVGAGITDPAAYSTEPDVAISFGMG LGNPVTNLGIQLSPTIWDVSKFDNFSLSCKVHRYLGKATSLAIGGENLFADKKKTDTGESYYIVISHAFQNVHSHNPDVS ALHASFGIGSGRFDEKSPLDIQSGKGRYGTYVFGSLAYEIFPSANIVIDWNGLNLSAGVALSPFQKIPVGMTLGVADITN YSGDRLRFIASVGYAYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27673; Mature: 27542
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTGKVFSEPISSTPAIGETVILSVHTSQNKIIWPNRAAKSLTTPSGWGASWGVIFVGA CCCCCCHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCHHCCCCCCCCCCCCEEEEEEC GITDPAAYSTEPDVAISFGMGLGNPVTNLGIQLSPTIWDVSKFDNFSLSCKVHRYLGKAT CCCCCCCCCCCCCEEEEECCCCCCCHHHCCEEECCCEEECCCCCCEEEEEEEEHHHCCCE SLAIGGENLFADKKKTDTGESYYIVISHAFQNVHSHNPDVSALHASFGIGSGRFDEKSPL EEEECCCCEECCCCCCCCCCEEEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC DIQSGKGRYGTYVFGSLAYEIFPSANIVIDWNGLNLSAGVALSPFQKIPVGMTLGVADIT CCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCEEECCCEECCHHHCCCCEEECHHHHC NYSGDRLRFIASVGYAYQF CCCCCEEEEEEECCEEECC >Mature Secondary Structure SFTGKVFSEPISSTPAIGETVILSVHTSQNKIIWPNRAAKSLTTPSGWGASWGVIFVGA CCCCCHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCHHCCCCCCCCCCCCEEEEEEC GITDPAAYSTEPDVAISFGMGLGNPVTNLGIQLSPTIWDVSKFDNFSLSCKVHRYLGKAT CCCCCCCCCCCCCEEEEECCCCCCCHHHCCEEECCCEEECCCCCCEEEEEEEEHHHCCCE SLAIGGENLFADKKKTDTGESYYIVISHAFQNVHSHNPDVSALHASFGIGSGRFDEKSPL EEEECCCCEECCCCCCCCCCEEEEEEEEHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC DIQSGKGRYGTYVFGSLAYEIFPSANIVIDWNGLNLSAGVALSPFQKIPVGMTLGVADIT CCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCEEECCCEECCHHHCCCCEEECHHHHC NYSGDRLRFIASVGYAYQF CCCCCEEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA