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The map label for this gene is etfB [H]

Identifier: 119358287

GI number: 119358287

Start: 2884000

End: 2884776

Strand: Direct

Name: etfB [H]

Synonym: Cpha266_2519

Alternate gene names: 119358287

Gene position: 2884000-2884776 (Clockwise)

Preceding gene: 119358286

Following gene: 119358288

Centisome position: 92.03

GC content: 50.45

Gene sequence:

>777_bases
ATGAAACTACTCGTCTGTATCAAACAGATCCCGGATATGGAGTCTCAATTCAAACCCGATGAAAACGGATCATGGTTTGA
AGAGTCCGGACTTGTCTACCGAATGAACGAATATGACGACTACGCCGTCGAAGAGGCCGTTCGCCTCAAGGAGCAACTTG
GAAACAATACTGATCTGACCGTACTCTCAATCGGCCCTGATCGGGTAGTTGAGATCATTAAAAAAGCCCTTGCCATCGGA
TGCGACCGAGGCGTCCATATCCATGAACCGGCAGCCGCCCATAAAGATCCCTGGCAGATTGCTTCGCTCATAGCCGGTTT
CGCAAAAGAACGACAGTATGACCTGATCTTCACCGGCATACAGTCCCAGGATCGGGGTTCAGCCCAGGTAGGGGTCATGG
TTGCCGAACAATTAGGCTACTCCTGTGTCACAACGCTTGTCGGATTTGCCTGCCATGAGGGTCTTATCACCGGCTTGCGC
GAACTTGAGGGTGGCCGAAAAGGAGTCGTCAAGCTCAGAACTCCGGCTCTTGTCACCTGTCAGTCAGGGCTCAATAAACC
CAGATACCCTACCCTGCTGAATATCCTGAAAGCAAAAAAGAAAGAGATCCTCACCATCCCGGCAGGCGATCTGCCCGAAA
CGACATCGCTGACCACGACAACCCGTATCTATAAACCTGAAAAAAAAGGAACCGGCCTGATTCTCGAAGGCGAAACAGCG
AGTCTGGTAAATCAGGTAATCGACCTGTTGAGAAAAAACACGACACTTGTTCGATAA

Upstream 100 bases:

>100_bases
TGATGAAATAGTATTCATAAAACCATGAAGCAGCAATTTTACATAAAAACAGGCATGGCGGCTGCATTATTGATCATGCT
GCAAACGTTTTACAAAACCC

Downstream 100 bases:

>100_bases
TAAAACACCGCCATGAAAACATTACTTATCGCCGAAAGCAGAGAAGGCCGGCTTCTCGATACAACTTATGAGCTCTTCGG
AGCGGCAGCAAAACTGAAAG

Product: electron transfer flavoprotein beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKLLVCIKQIPDMESQFKPDENGSWFEESGLVYRMNEYDDYAVEEAVRLKEQLGNNTDLTVLSIGPDRVVEIIKKALAIG
CDRGVHIHEPAAAHKDPWQIASLIAGFAKERQYDLIFTGIQSQDRGSAQVGVMVAEQLGYSCVTTLVGFACHEGLITGLR
ELEGGRKGVVKLRTPALVTCQSGLNKPRYPTLLNILKAKKKEILTIPAGDLPETTSLTTTTRIYKPEKKGTGLILEGETA
SLVNQVIDLLRKNTTLVR

Sequences:

>Translated_258_residues
MKLLVCIKQIPDMESQFKPDENGSWFEESGLVYRMNEYDDYAVEEAVRLKEQLGNNTDLTVLSIGPDRVVEIIKKALAIG
CDRGVHIHEPAAAHKDPWQIASLIAGFAKERQYDLIFTGIQSQDRGSAQVGVMVAEQLGYSCVTTLVGFACHEGLITGLR
ELEGGRKGVVKLRTPALVTCQSGLNKPRYPTLLNILKAKKKEILTIPAGDLPETTSLTTTTRIYKPEKKGTGLILEGETA
SLVNQVIDLLRKNTTLVR
>Mature_258_residues
MKLLVCIKQIPDMESQFKPDENGSWFEESGLVYRMNEYDDYAVEEAVRLKEQLGNNTDLTVLSIGPDRVVEIIKKALAIG
CDRGVHIHEPAAAHKDPWQIASLIAGFAKERQYDLIFTGIQSQDRGSAQVGVMVAEQLGYSCVTTLVGFACHEGLITGLR
ELEGGRKGVVKLRTPALVTCQSGLNKPRYPTLLNILKAKKKEILTIPAGDLPETTSLTTTTRIYKPEKKGTGLILEGETA
SLVNQVIDLLRKNTTLVR

Specific function: The electron transfer flavoprotein of this bacterium serves as an electron acceptor specifically for trimethylamine dehydrogenase. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=241, Percent_Identity=35.2697095435685, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI62420877, Length=224, Percent_Identity=36.1607142857143, Blast_Score=118, Evalue=4e-27,
Organism=Escherichia coli, GI87082158, Length=261, Percent_Identity=24.5210727969349, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081682, Length=257, Percent_Identity=26.4591439688716, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=234, Percent_Identity=32.4786324786325, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6321646, Length=218, Percent_Identity=30.7339449541284, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24651147, Length=219, Percent_Identity=36.0730593607306, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24651145, Length=219, Percent_Identity=36.0730593607306, Blast_Score=114, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28436; Mature: 28436

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLVCIKQIPDMESQFKPDENGSWFEESGLVYRMNEYDDYAVEEAVRLKEQLGNNTDLT
CHHEEEEHHCCCCHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEE
VLSIGPDRVVEIIKKALAIGCDRGVHIHEPAAAHKDPWQIASLIAGFAKERQYDLIFTGI
EEECCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
QSQDRGSAQVGVMVAEQLGYSCVTTLVGFACHEGLITGLRELEGGRKGVVKLRTPALVTC
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEE
QSGLNKPRYPTLLNILKAKKKEILTIPAGDLPETTSLTTTTRIYKPEKKGTGLILEGETA
HHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECCHH
SLVNQVIDLLRKNTTLVR
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLLVCIKQIPDMESQFKPDENGSWFEESGLVYRMNEYDDYAVEEAVRLKEQLGNNTDLT
CHHEEEEHHCCCCHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEE
VLSIGPDRVVEIIKKALAIGCDRGVHIHEPAAAHKDPWQIASLIAGFAKERQYDLIFTGI
EEECCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
QSQDRGSAQVGVMVAEQLGYSCVTTLVGFACHEGLITGLRELEGGRKGVVKLRTPALVTC
CCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEE
QSGLNKPRYPTLLNILKAKKKEILTIPAGDLPETTSLTTTTRIYKPEKKGTGLILEGETA
HHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECCHH
SLVNQVIDLLRKNTTLVR
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798207; 12567183 [H]