| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is pepQ [H]
Identifier: 119358286
GI number: 119358286
Start: 2882755
End: 2883927
Strand: Direct
Name: pepQ [H]
Synonym: Cpha266_2518
Alternate gene names: 119358286
Gene position: 2882755-2883927 (Clockwise)
Preceding gene: 119358285
Following gene: 119358287
Centisome position: 91.99
GC content: 52.09
Gene sequence:
>1173_bases ATGCTGACTATAACAGAATCGGAACACCGCATATCGCACATGCAGAGGCGACTTCAAGAGAGTGGAATCTCAGGCGCGCT CTTCATGTTCCCCATTGATATCTACTATTTCAGCGGCACCCGCCAGAACGCTGCGCTCTGGATGCCTGCGGAAGGAGTAC CCATACTCTTCGTGCGAAAAAGCCTCACCCGAGCAAGAGCGGAAAGCCCTCTCGTCGACATCCGGCCCTTTCCCTCCGGC AAAGAGTTCCCGACACTGTTCAGCGATGAAATCATAACCATCGGCATGACCTTTGACGTCATTCCGGTACAGCAGTTCAA CTACTACACAAAAGTTCTTCCAGGCCGGAAATTCGTCGATATCTCACCAATTATCCGTGAGATCCGATCCGTTAAATCGA ACGCAGAACTCGAAAAGCTTCGCTCGGGAGCAGAAAAGCTCTGCTCTGTATTCAGCGAAGTGCCGCAGTTCCTGAAAGCA GGGATGCGGGAGCTTGACCTGGCAGCAGAGTTCGAATACCGGCTTCGAAAAGCCGGTCATGAAGGCTATGTCCGCATGAG AGCCTTCAATCAGGAACTTGCCGGCGGCCTGGCAGTCTCAAAAGGGGGAACTGCTCACGGGTGCTTTGACGGCGCCGTAA CCGGAAAAGGGCTTTCATGCGCATCACCGCAAGGGGCCTCCCTTGAAATAATCCCTGAAAACGAACCCATTCTGCTTGAT TACGCAGGAGTTTTCGGCGGTTATATTTCCGACATGACCCGGATTTTCGTAATCGGCTCGCTTGACACCCGTTTGCAGGA AGCGTTCGATGTTGCCATCAGCATTCAGTCCGCCATACAACAGGCTATGATACCCGGAGCCATTGCCGAAAATCTATACC TCCTCGCCCTGCAAATGGCTGAAAAGGCCGGATTAGACTCCTGCTTTATGGGGCTGCCTGGAGAACAGTCAAAATTCGTC GGCCATGGCGTTGGCCTCGAACTTGACGAGTTCCCGATACTTGCAAAAGGTTTCAACATGCCGCTTCAGGCAGGTCAGAC CATCGCCGTCGAACCCAAGTTCGTCATACCCGGCAAAGGAGTCATCGGCATTGAAAACACCTTTATTGTCAGCGGGCATG GCGGATTAAAAGTCACCGATATCCCTGATGAAATAGTATTCATAAAACCATGA
Upstream 100 bases:
>100_bases GAAGAGGGCATCAAAAGCGGCGGCTATGAAGGCAAGCTGAAAGCCAGGGACCTCGCAGAAATCGTTGCTGAACGATTAAA CAACCCATAACAAACAACTT
Downstream 100 bases:
>100_bases AGCAGCAATTTTACATAAAAACAGGCATGGCGGCTGCATTATTGATCATGCTGCAAACGTTTTACAAAACCCATGAAACT ACTCGTCTGTATCAAACAGA
Product: peptidase M24
Products: NA
Alternate protein names: X-Pro dipeptidase; Imidodipeptidase; Proline dipeptidase; Prolidase [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MLTITESEHRISHMQRRLQESGISGALFMFPIDIYYFSGTRQNAALWMPAEGVPILFVRKSLTRARAESPLVDIRPFPSG KEFPTLFSDEIITIGMTFDVIPVQQFNYYTKVLPGRKFVDISPIIREIRSVKSNAELEKLRSGAEKLCSVFSEVPQFLKA GMRELDLAAEFEYRLRKAGHEGYVRMRAFNQELAGGLAVSKGGTAHGCFDGAVTGKGLSCASPQGASLEIIPENEPILLD YAGVFGGYISDMTRIFVIGSLDTRLQEAFDVAISIQSAIQQAMIPGAIAENLYLLALQMAEKAGLDSCFMGLPGEQSKFV GHGVGLELDEFPILAKGFNMPLQAGQTIAVEPKFVIPGKGVIGIENTFIVSGHGGLKVTDIPDEIVFIKP
Sequences:
>Translated_390_residues MLTITESEHRISHMQRRLQESGISGALFMFPIDIYYFSGTRQNAALWMPAEGVPILFVRKSLTRARAESPLVDIRPFPSG KEFPTLFSDEIITIGMTFDVIPVQQFNYYTKVLPGRKFVDISPIIREIRSVKSNAELEKLRSGAEKLCSVFSEVPQFLKA GMRELDLAAEFEYRLRKAGHEGYVRMRAFNQELAGGLAVSKGGTAHGCFDGAVTGKGLSCASPQGASLEIIPENEPILLD YAGVFGGYISDMTRIFVIGSLDTRLQEAFDVAISIQSAIQQAMIPGAIAENLYLLALQMAEKAGLDSCFMGLPGEQSKFV GHGVGLELDEFPILAKGFNMPLQAGQTIAVEPKFVIPGKGVIGIENTFIVSGHGGLKVTDIPDEIVFIKP >Mature_390_residues MLTITESEHRISHMQRRLQESGISGALFMFPIDIYYFSGTRQNAALWMPAEGVPILFVRKSLTRARAESPLVDIRPFPSG KEFPTLFSDEIITIGMTFDVIPVQQFNYYTKVLPGRKFVDISPIIREIRSVKSNAELEKLRSGAEKLCSVFSEVPQFLKA GMRELDLAAEFEYRLRKAGHEGYVRMRAFNQELAGGLAVSKGGTAHGCFDGAVTGKGLSCASPQGASLEIIPENEPILLD YAGVFGGYISDMTRIFVIGSLDTRLQEAFDVAISIQSAIQQAMIPGAIAENLYLLALQMAEKAGLDSCFMGLPGEQSKFV GHGVGLELDEFPILAKGFNMPLQAGQTIAVEPKFVIPGKGVIGIENTFIVSGHGGLKVTDIPDEIVFIKP
Specific function: Splits dipeptides with a prolyl in the C-terminal position and a nonpolar amino acid at the N-terminal position [H]
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family. Archaeal-type prolidase subfamily [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=288, Percent_Identity=25.3472222222222, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1788728, Length=277, Percent_Identity=25.6317689530686, Blast_Score=89, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.13.9 [H]
Molecular weight: Translated: 42588; Mature: 42588
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTITESEHRISHMQRRLQESGISGALFMFPIDIYYFSGTRQNAALWMPAEGVPILFVRK CEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCCEEEEEHH SLTRARAESPLVDIRPFPSGKEFPTLFSDEIITIGMTFDVIPVQQFNYYTKVLPGRKFVD HHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHCHHHHCCCCCCEEE ISPIIREIRSVKSNAELEKLRSGAEKLCSVFSEVPQFLKAGMRELDLAAEFEYRLRKAGH HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGYVRMRAFNQELAGGLAVSKGGTAHGCFDGAVTGKGLSCASPQGASLEIIPENEPILLD CCEEEEEEHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE YAGVFGGYISDMTRIFVIGSLDTRLQEAFDVAISIQSAIQQAMIPGAIAENLYLLALQMA EHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EKAGLDSCFMGLPGEQSKFVGHGVGLELDEFPILAKGFNMPLQAGQTIAVEPKFVIPGKG HHCCCCHHHCCCCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCEEEECCEEEECCCC VIGIENTFIVSGHGGLKVTDIPDEIVFIKP EEEECCEEEEECCCCEEEEECCCCEEEECC >Mature Secondary Structure MLTITESEHRISHMQRRLQESGISGALFMFPIDIYYFSGTRQNAALWMPAEGVPILFVRK CEEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCEEEECCCCCEEEEEHH SLTRARAESPLVDIRPFPSGKEFPTLFSDEIITIGMTFDVIPVQQFNYYTKVLPGRKFVD HHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHCHHHHCCCCCCEEE ISPIIREIRSVKSNAELEKLRSGAEKLCSVFSEVPQFLKAGMRELDLAAEFEYRLRKAGH HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGYVRMRAFNQELAGGLAVSKGGTAHGCFDGAVTGKGLSCASPQGASLEIIPENEPILLD CCEEEEEEHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE YAGVFGGYISDMTRIFVIGSLDTRLQEAFDVAISIQSAIQQAMIPGAIAENLYLLALQMA EHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EKAGLDSCFMGLPGEQSKFVGHGVGLELDEFPILAKGFNMPLQAGQTIAVEPKFVIPGKG HHCCCCHHHCCCCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCEEEECCEEEECCCC VIGIENTFIVSGHGGLKVTDIPDEIVFIKP EEEECCEEEEECCCCEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9733678; 11223522; 11210522 [H]