Click here to switch to the map view.

The map label for this gene is rpmF

Identifier: 119358256

GI number: 119358256

Start: 2856026

End: 2856217

Strand: Direct

Name: rpmF

Synonym: Cpha266_2488

Alternate gene names: 119358256

Gene position: 2856026-2856217 (Clockwise)

Preceding gene: 119358255

Following gene: 119358257

Centisome position: 91.13

GC content: 53.65

Gene sequence:

>192_bases
ATGGCAAATCCAAAAGCCAAAATGTCGAAATCCAGAAGGGATAAACGACGGGCTCAGTTCAATGCACGCACAAAACCGGT
AACAACTGTCAACTGTCCGAACTGCGGCGAACCTACACTGCCACATCGCGCATGCCGGCATTGTGGACACTACCGCGGCA
GAGCGGTGACCGGAAAAACCGCAAACGGCTGA

Upstream 100 bases:

>100_bases
ACGAAAGGCTCGATGACCATGAAAAAAGCTCTTGGCATGAGTCTCTTGAAAAGCTTAAAAACAAGTATCGTTAACCGACA
ATAAAGATCAGAGAAGAACC

Downstream 100 bases:

>100_bases
TCAACTTTTAAGTACACCCCATCATGCTGACCATTGCTGTTGACGCCATGGGAGGAGATAATGCCCCTGCCTGTGTGATC
GAGGGAACAGTTCAGGCTTT

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MANPKAKMSKSRRDKRRAQFNARTKPVTTVNCPNCGEPTLPHRACRHCGHYRGRAVTGKTANG

Sequences:

>Translated_63_residues
MANPKAKMSKSRRDKRRAQFNARTKPVTTVNCPNCGEPTLPHRACRHCGHYRGRAVTGKTANG
>Mature_62_residues
ANPKAKMSKSRRDKRRAQFNARTKPVTTVNCPNCGEPTLPHRACRHCGHYRGRAVTGKTANG

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_CHLPD (A1BJ99)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_912900.1
- ProteinModelPortal:   A1BJ99
- SMR:   A1BJ99
- STRING:   A1BJ99
- GeneID:   4568541
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_2488
- NMPDR:   fig|290317.7.peg.2604
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- OMA:   HRACRHC
- ProtClustDB:   PRK12286
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6992; Mature: 6861

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPKAKMSKSRRDKRRAQFNARTKPVTTVNCPNCGEPTLPHRACRHCGHYRGRAVTGKT
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
ANG
CCC
>Mature Secondary Structure 
ANPKAKMSKSRRDKRRAQFNARTKPVTTVNCPNCGEPTLPHRACRHCGHYRGRAVTGKT
CCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
ANG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA