| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358239
Identifier: 119358239
GI number: 119358239
Start: 2844092
End: 2844607
Strand: Reverse
Name: 119358239
Synonym: Cpha266_2471
Alternate gene names: NA
Gene position: 2844607-2844092 (Counterclockwise)
Preceding gene: 119358240
Following gene: 119358238
Centisome position: 90.77
GC content: 45.35
Gene sequence:
>516_bases ATGCTGCTGATTAACCGCTTTATCTCGCTTATCGAAGATCATGCGGAATCCCTGTCCATGAAATGGGTTCAGGATGTCCG CACAAATCATCTCACCGAAGGGTATTCTGTATATACCAGAGATGCACTTCACGATATCGTTTATACCCGTATCAGAAAAC TGGGTGAATGGATTGAGAAAAACGAAGGACGCGACCGTCTTATCGCACAGCATTTTTGCGAGATTGGCGCGGTTCGCGCA ACGTCGGGCATCAAGGCAAGTGAAATGGTCTATTCGCTGATGCTTGAACGCGATCTTCTCTGGCATTACATCCTTGACGA AGGCATTGTGACTGAAGGTGTCGATCTGAACAGGGCGATCGAATTTTCAAATCGCTTGAATTATTTTTACGAAAAAGCGA TTTACTTCGCTCTGGTCGGGCATGAAAAAGAGCAGAGTTGTACTCCCGATATGAAGGAAGAGGGCTTTTTTGACAAGATA TTCGAGGGATTCAAACACTGGCTGATTGTTGAGTAG
Upstream 100 bases:
>100_bases TTTCTCCAGCGGCAGGAATCATTCGGTTTTATTTGAATAGTTCGATAAGGAGCTTTAGCTTTTTAGTGTGGCTGATTTTC CTTGTTTAAATTTATTTACC
Downstream 100 bases:
>100_bases TGATTGCAGCGCCGAAAGTTACCGAAGAGGTCGCCTTGTGGCTACTTTTTACGGGATGCTGACATTCTGTTTTTTGTTGT TGCGAGCGGTTTGAGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MLLINRFISLIEDHAESLSMKWVQDVRTNHLTEGYSVYTRDALHDIVYTRIRKLGEWIEKNEGRDRLIAQHFCEIGAVRA TSGIKASEMVYSLMLERDLLWHYILDEGIVTEGVDLNRAIEFSNRLNYFYEKAIYFALVGHEKEQSCTPDMKEEGFFDKI FEGFKHWLIVE
Sequences:
>Translated_171_residues MLLINRFISLIEDHAESLSMKWVQDVRTNHLTEGYSVYTRDALHDIVYTRIRKLGEWIEKNEGRDRLIAQHFCEIGAVRA TSGIKASEMVYSLMLERDLLWHYILDEGIVTEGVDLNRAIEFSNRLNYFYEKAIYFALVGHEKEQSCTPDMKEEGFFDKI FEGFKHWLIVE >Mature_171_residues MLLINRFISLIEDHAESLSMKWVQDVRTNHLTEGYSVYTRDALHDIVYTRIRKLGEWIEKNEGRDRLIAQHFCEIGAVRA TSGIKASEMVYSLMLERDLLWHYILDEGIVTEGVDLNRAIEFSNRLNYFYEKAIYFALVGHEKEQSCTPDMKEEGFFDKI FEGFKHWLIVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20171; Mature: 20171
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLINRFISLIEDHAESLSMKWVQDVRTNHLTEGYSVYTRDALHDIVYTRIRKLGEWIEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NEGRDRLIAQHFCEIGAVRATSGIKASEMVYSLMLERDLLWHYILDEGIVTEGVDLNRAI CCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH EFSNRLNYFYEKAIYFALVGHEKEQSCTPDMKEEGFFDKIFEGFKHWLIVE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHEECC >Mature Secondary Structure MLLINRFISLIEDHAESLSMKWVQDVRTNHLTEGYSVYTRDALHDIVYTRIRKLGEWIEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NEGRDRLIAQHFCEIGAVRATSGIKASEMVYSLMLERDLLWHYILDEGIVTEGVDLNRAI CCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH EFSNRLNYFYEKAIYFALVGHEKEQSCTPDMKEEGFFDKIFEGFKHWLIVE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA