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The map label for this gene is 119358230

Identifier: 119358230

GI number: 119358230

Start: 2835668

End: 2837110

Strand: Direct

Name: 119358230

Synonym: Cpha266_2462

Alternate gene names: NA

Gene position: 2835668-2837110 (Clockwise)

Preceding gene: 119358229

Following gene: 119358231

Centisome position: 90.48

GC content: 50.31

Gene sequence:

>1443_bases
ATGATCACAGCCAAAAAAGTTCTACTTGTCTTTCTTCCTACCGACAGCGGCGTTGACGGAGCCCGCTCGCTCTATACGGA
AAAAGAAAAACACCCGCTATCCCAATGGATCGGCAGCTCGATGCGAAACCTGATTAAAAAAAGCCCCTTTTCCATTCCGC
CGTTATCGCTCATGATCCTCGGATCTATTGAGATTCCCGGAGTGGAACAGTTTTTTTGCGACATGCGGTTTGAAGAGTTC
CCTGCCGAAATTCCGTGGGATCTGGTAGGGATCAGTGTTCAGACCGGCATGGCAAGACAGGCCTTCGAGCTTGCTGACAG
ACTTCGCCAAAAAGGAATCACCGTAGCGCTTGGCGGAGCGCATATCACGCTTTTTGCTGATTCCTCACGTCCTCACGCAG
ACATTCTTGTTCACGGAGAAGCCGACGACCTATGGCGACAGGTACTGCTCGACCTGAAAACCGGAACCATGCATGCCGAT
TACCGATCCGACAACTTCCCGGATATGGGCATACCAAGACCGGTAAGCAAAACCATGCTGCTCAAAAACCGCTACTTCAC
CACCAATCTGATCCAGACTGGTCGCGGCTGCCCGTATCAGTGCGATTTCTGCAACGTTCACGTACTTAACGGCCATACCC
TCCGACGAAGGAATATTGCCGATATTGTTGCCGAAGTCAACCGCTTTAAGCTGCACGACAAAAGGATTTTTTTCTTTGTT
GACGATTCGATCAACGCCGATCCTGTTTATGCAAGAGAGCTGTTCCGCCAGCTTATTCCCTGCGGTATCAACTGGTTCGG
ACAGGCTACGACAACTCTCGGCCAGCAGCCAGAACTGCTCGAAACATTTGCGCGATCAGGCTGTCAGGCGCTGCTTGTCG
GCATCGAAAGTATTGAGCCGAAAAGCCGGGAGGCTCACCGAAAAACCCAGAACAGAGCAACTGAACTCTCCTCGGCCATC
AGGAACATCCGTAATGCCGGGATCAGTCTCTATGGCAGCTTTATCTATGGCCTTGACGGCGACACGCTCGATACCCCTTC
AGCCATTCTTGATTTTATCAGTGAAACAAAACTTGATGTTCCCGGTATCAATATTCTCAGACCAATCCCCGGAACGCGCG
TTTTTGAACGACTGAAAGAGGAGGGACGTCTTCTGTTCGACCCTCTTGACATCACCGCATATCGATATACGTTCGGCCAG
GAGATGCTCTACCTGCCAAAAAACATCCCGCTGGATGCGTTTGTCGAAAGCTATGCAACGCTGACCTCAAAGGTCTTTAC
TCTCGGCGCATCATTCAAAAGAGGGTTTGCTGCGCCAAGCGCAAAAACAGGCGTTCTTCTGTTCAATCTTTTTTACACCT
ACCTCTACGGACTCTCTCGACACGACCTTTCCCGACAGATTGAAAAAGGCCAAAAAAAAACCATTTTGCCATACCGGGAA
TAA

Upstream 100 bases:

>100_bases
GACAAGGTAAGGGCTGACGAAATCCGCCTGATGCAGCAGCTTGCAGTTCCTCGATCGCGTCCGGAGCGAACAGGAGCAAC
TAATCAGGACTGGTAGAGGA

Downstream 100 bases:

>100_bases
TTTTTAAAATTAAAGCCGTTTTTTTTTATTATTAGCTCAACACTCACACTCACAACCTGTATCACGGAGATAACTATGAA
ACGTTTCCTGCCTCTTCTGA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MITAKKVLLVFLPTDSGVDGARSLYTEKEKHPLSQWIGSSMRNLIKKSPFSIPPLSLMILGSIEIPGVEQFFCDMRFEEF
PAEIPWDLVGISVQTGMARQAFELADRLRQKGITVALGGAHITLFADSSRPHADILVHGEADDLWRQVLLDLKTGTMHAD
YRSDNFPDMGIPRPVSKTMLLKNRYFTTNLIQTGRGCPYQCDFCNVHVLNGHTLRRRNIADIVAEVNRFKLHDKRIFFFV
DDSINADPVYARELFRQLIPCGINWFGQATTTLGQQPELLETFARSGCQALLVGIESIEPKSREAHRKTQNRATELSSAI
RNIRNAGISLYGSFIYGLDGDTLDTPSAILDFISETKLDVPGINILRPIPGTRVFERLKEEGRLLFDPLDITAYRYTFGQ
EMLYLPKNIPLDAFVESYATLTSKVFTLGASFKRGFAAPSAKTGVLLFNLFYTYLYGLSRHDLSRQIEKGQKKTILPYRE

Sequences:

>Translated_480_residues
MITAKKVLLVFLPTDSGVDGARSLYTEKEKHPLSQWIGSSMRNLIKKSPFSIPPLSLMILGSIEIPGVEQFFCDMRFEEF
PAEIPWDLVGISVQTGMARQAFELADRLRQKGITVALGGAHITLFADSSRPHADILVHGEADDLWRQVLLDLKTGTMHAD
YRSDNFPDMGIPRPVSKTMLLKNRYFTTNLIQTGRGCPYQCDFCNVHVLNGHTLRRRNIADIVAEVNRFKLHDKRIFFFV
DDSINADPVYARELFRQLIPCGINWFGQATTTLGQQPELLETFARSGCQALLVGIESIEPKSREAHRKTQNRATELSSAI
RNIRNAGISLYGSFIYGLDGDTLDTPSAILDFISETKLDVPGINILRPIPGTRVFERLKEEGRLLFDPLDITAYRYTFGQ
EMLYLPKNIPLDAFVESYATLTSKVFTLGASFKRGFAAPSAKTGVLLFNLFYTYLYGLSRHDLSRQIEKGQKKTILPYRE
>Mature_480_residues
MITAKKVLLVFLPTDSGVDGARSLYTEKEKHPLSQWIGSSMRNLIKKSPFSIPPLSLMILGSIEIPGVEQFFCDMRFEEF
PAEIPWDLVGISVQTGMARQAFELADRLRQKGITVALGGAHITLFADSSRPHADILVHGEADDLWRQVLLDLKTGTMHAD
YRSDNFPDMGIPRPVSKTMLLKNRYFTTNLIQTGRGCPYQCDFCNVHVLNGHTLRRRNIADIVAEVNRFKLHDKRIFFFV
DDSINADPVYARELFRQLIPCGINWFGQATTTLGQQPELLETFARSGCQALLVGIESIEPKSREAHRKTQNRATELSSAI
RNIRNAGISLYGSFIYGLDGDTLDTPSAILDFISETKLDVPGINILRPIPGTRVFERLKEEGRLLFDPLDITAYRYTFGQ
EMLYLPKNIPLDAFVESYATLTSKVFTLGASFKRGFAAPSAKTGVLLFNLFYTYLYGLSRHDLSRQIEKGQKKTILPYRE

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 54143; Mature: 54143

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAKKVLLVFLPTDSGVDGARSLYTEKEKHPLSQWIGSSMRNLIKKSPFSIPPLSLMIL
CCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
GSIEIPGVEQFFCDMRFEEFPAEIPWDLVGISVQTGMARQAFELADRLRQKGITVALGGA
ECCCCCCHHHHHHHCCHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCE
HITLFADSSRPHADILVHGEADDLWRQVLLDLKTGTMHADYRSDNFPDMGIPRPVSKTML
EEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHHHH
LKNRYFTTNLIQTGRGCPYQCDFCNVHVLNGHTLRRRNIADIVAEVNRFKLHDKRIFFFV
HHCCCHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHEEECCEEEEEE
DDSINADPVYARELFRQLIPCGINWFGQATTTLGQQPELLETFARSGCQALLVGIESIEP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHCCHHEEEHHHHCCCC
KSREAHRKTQNRATELSSAIRNIRNAGISLYGSFIYGLDGDTLDTPSAILDFISETKLDV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
PGINILRPIPGTRVFERLKEEGRLLFDPLDITAYRYTFGQEMLYLPKNIPLDAFVESYAT
CCCCEECCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCEEEECCCCCCHHHHHHHHHH
LTSKVFTLGASFKRGFAAPSAKTGVLLFNLFYTYLYGLSRHDLSRQIEKGQKKTILPYRE
HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MITAKKVLLVFLPTDSGVDGARSLYTEKEKHPLSQWIGSSMRNLIKKSPFSIPPLSLMIL
CCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
GSIEIPGVEQFFCDMRFEEFPAEIPWDLVGISVQTGMARQAFELADRLRQKGITVALGGA
ECCCCCCHHHHHHHCCHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCE
HITLFADSSRPHADILVHGEADDLWRQVLLDLKTGTMHADYRSDNFPDMGIPRPVSKTML
EEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHHHH
LKNRYFTTNLIQTGRGCPYQCDFCNVHVLNGHTLRRRNIADIVAEVNRFKLHDKRIFFFV
HHCCCHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHEEECCEEEEEE
DDSINADPVYARELFRQLIPCGINWFGQATTTLGQQPELLETFARSGCQALLVGIESIEP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHCCHHEEEHHHHCCCC
KSREAHRKTQNRATELSSAIRNIRNAGISLYGSFIYGLDGDTLDTPSAILDFISETKLDV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
PGINILRPIPGTRVFERLKEEGRLLFDPLDITAYRYTFGQEMLYLPKNIPLDAFVESYAT
CCCCEECCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCEEEECCCCCCHHHHHHHHHH
LTSKVFTLGASFKRGFAAPSAKTGVLLFNLFYTYLYGLSRHDLSRQIEKGQKKTILPYRE
HHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]