| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358221
Identifier: 119358221
GI number: 119358221
Start: 2827757
End: 2828677
Strand: Reverse
Name: 119358221
Synonym: Cpha266_2453
Alternate gene names: NA
Gene position: 2828677-2827757 (Counterclockwise)
Preceding gene: 119358222
Following gene: 119358220
Centisome position: 90.26
GC content: 53.2
Gene sequence:
>921_bases ATGGCCCGAGAGCGCCTCTTGTTGTTTCTGATAATCAGTTTTTTTGTTTCCATCCTGACACCTGCCCGTGCGGAAGGGGA CAAAAAAGCCGACAGCATTACCTTCAGGCTCTCCGCAGACAGCGTCTATGCTGGCGGTCGCGTGCAATGCGTTTTTATGG TGCGCTCATTGAAGGGTCAGCATGCCGAGATTTTGATTGACAGCAGTGCCATCAAGCCTTTTGTTTTTATCGGCAGTAAA AGGTTTTCAGGCTCTTTTTTTCAGGGCGTCAGCCAGGAGCGTCTTGAGCTGGAACTTGCGGCATTCGGCAGTGGCCAGCA GACGATTCCTCCGCTGCCGGTCATGTTCCGGGACAACGCCGGAAACGTTACCGGACGTATCGATCAAACCCCTCCAGTCA GAGTGTTTATCAAGTCGATGACCGATTCGTCAATGCATCAGCTCAGGCCGATAAAGCCGCTTGCTGCGCCCGATTTTCCT TATTTTCTCTTTGTTCCGCTTCTCTTTTTCGTGCTATCCGGAGCAGCGGTGGTATTGCTTTTTCTTTATCTTGTCAGGCG AAAGGTCCATAAAAGCGCAGAATCCGTTGATCCCGGTCAGGTCGCGCACCGCAAACTCAGCAAGCTCACCACTCGGCTGT CAGCGGGGATGACTCCGTCAGCCTGTCATGACGAACTCAGTGCCATTATGCGGGAGTATCTTGAACGCAGGTTTAACATC AGGGCGCTTGAAGCCGTGACGCAGGAGATTGAGCGCGACCTGAAAAAACTCGAAGTTGCCGGACGCGAAAGCATCATCAA TCTGCTCCGGCAGGCAGATCTTGTCAAATTCGCCGACAGTCGGCCCGATCTCGAAGAGAGCCGCCAGTCGATTCACAAGG CCGAACAGCTTATCCGGTCGGTGCGCCATACGAAGCGTTGA
Upstream 100 bases:
>100_bases AAAATCGATACGGTTTTTCTCGATACGGATCGTTCCTTTATCAGCGATCTCAATGCTTTTTTTCGCTATCGTGAGCAGAA AATCTAAACTGAACGGAACA
Downstream 100 bases:
>100_bases GACCGGTTTTATTCCTGACAAACCTGACCGGGTTTTCCGGGAATGCGACTCTTGAACTTGCTCTCCTCCCTGTTATATTT ATCCTCCGGATATGGAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MARERLLLFLIISFFVSILTPARAEGDKKADSITFRLSADSVYAGGRVQCVFMVRSLKGQHAEILIDSSAIKPFVFIGSK RFSGSFFQGVSQERLELELAAFGSGQQTIPPLPVMFRDNAGNVTGRIDQTPPVRVFIKSMTDSSMHQLRPIKPLAAPDFP YFLFVPLLFFVLSGAAVVLLFLYLVRRKVHKSAESVDPGQVAHRKLSKLTTRLSAGMTPSACHDELSAIMREYLERRFNI RALEAVTQEIERDLKKLEVAGRESIINLLRQADLVKFADSRPDLEESRQSIHKAEQLIRSVRHTKR
Sequences:
>Translated_306_residues MARERLLLFLIISFFVSILTPARAEGDKKADSITFRLSADSVYAGGRVQCVFMVRSLKGQHAEILIDSSAIKPFVFIGSK RFSGSFFQGVSQERLELELAAFGSGQQTIPPLPVMFRDNAGNVTGRIDQTPPVRVFIKSMTDSSMHQLRPIKPLAAPDFP YFLFVPLLFFVLSGAAVVLLFLYLVRRKVHKSAESVDPGQVAHRKLSKLTTRLSAGMTPSACHDELSAIMREYLERRFNI RALEAVTQEIERDLKKLEVAGRESIINLLRQADLVKFADSRPDLEESRQSIHKAEQLIRSVRHTKR >Mature_305_residues ARERLLLFLIISFFVSILTPARAEGDKKADSITFRLSADSVYAGGRVQCVFMVRSLKGQHAEILIDSSAIKPFVFIGSKR FSGSFFQGVSQERLELELAAFGSGQQTIPPLPVMFRDNAGNVTGRIDQTPPVRVFIKSMTDSSMHQLRPIKPLAAPDFPY FLFVPLLFFVLSGAAVVLLFLYLVRRKVHKSAESVDPGQVAHRKLSKLTTRLSAGMTPSACHDELSAIMREYLERRFNIR ALEAVTQEIERDLKKLEVAGRESIINLLRQADLVKFADSRPDLEESRQSIHKAEQLIRSVRHTKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34430; Mature: 34298
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARERLLLFLIISFFVSILTPARAEGDKKADSITFRLSADSVYAGGRVQCVFMVRSLKGQ CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCCCEEHHHHHHHHCCC HAEILIDSSAIKPFVFIGSKRFSGSFFQGVSQERLELELAAFGSGQQTIPPLPVMFRDNA CEEEEEECCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCC GNVTGRIDQTPPVRVFIKSMTDSSMHQLRPIKPLAAPDFPYFLFVPLLFFVLSGAAVVLL CCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FLYLVRRKVHKSAESVDPGQVAHRKLSKLTTRLSAGMTPSACHDELSAIMREYLERRFNI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCH RALEAVTQEIERDLKKLEVAGRESIINLLRQADLVKFADSRPDLEESRQSIHKAEQLIRS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VRHTKR HHHCCC >Mature Secondary Structure ARERLLLFLIISFFVSILTPARAEGDKKADSITFRLSADSVYAGGRVQCVFMVRSLKGQ CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCCCEEHHHHHHHHCCC HAEILIDSSAIKPFVFIGSKRFSGSFFQGVSQERLELELAAFGSGQQTIPPLPVMFRDNA CEEEEEECCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCC GNVTGRIDQTPPVRVFIKSMTDSSMHQLRPIKPLAAPDFPYFLFVPLLFFVLSGAAVVLL CCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FLYLVRRKVHKSAESVDPGQVAHRKLSKLTTRLSAGMTPSACHDELSAIMREYLERRFNI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCH RALEAVTQEIERDLKKLEVAGRESIINLLRQADLVKFADSRPDLEESRQSIHKAEQLIRS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VRHTKR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA