| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358208
Identifier: 119358208
GI number: 119358208
Start: 2815923
End: 2816486
Strand: Reverse
Name: 119358208
Synonym: Cpha266_2440
Alternate gene names: NA
Gene position: 2816486-2815923 (Counterclockwise)
Preceding gene: 119358209
Following gene: 119358207
Centisome position: 89.87
GC content: 52.48
Gene sequence:
>564_bases ATGAACAGTGTGTTCAGAACCCGGATCGATGATGCGTATTGCACGGATCCGGCTAACCGTCTTCGCTGGCAGAAAACGCT TGCTTTTTTACAGGCTTCACCCGTCGCGCTTCCGAAGGCTGTTGCCGGTCTTGACCTTGGCGGGCGTACTCCTCTGACCG ATGTGCTTGAAAAGTTTTTCGATTGTCCGTTTCATGCAACAGCTATTGATCTCGATGTCGAGCCGCTTGAAGGTGCTTAC GGTGTGGTTACGGCTTTCGAAGTGCTTGAGCATCTGTTTAATCCGCTGCATGCACTTTTGCAGGTGCGGAGGGTGCTTGC CGGTCAGGATGCAAGGCTGTTTGTATCGATGCCTTTGGCAAAACCGGCCATGCTGGCCAGTCTGGATCATTTTCACGAGA TGAGCGGAGATGCCGCCTTGTCGCTCTTTACACGAGCAGGATTCCGTGTGGTGCGCAGCGACGCGTTCCGGATCCGTAAG TGGCCGTTTTATCTCACCGGGTTGAAACCTGTTTTGAGAGCCTTCTATGAAAAGGTGGTGATTTATGAGCTGGAAATCTG CTGA
Upstream 100 bases:
>100_bases TGTTTCTTCTTTTTATGCCGTTTCGTCTTGCCGCAAGTATGCTCGATGTACTGTTTTTGAGGGGTTTGACTATGGTTTCT TTCCGGCGGGGAGGCCACTC
Downstream 100 bases:
>100_bases CAACAGTGCTGCCGAGAGCGTAGATCTTGTCTGGTTTTCAGAGGTCCAATGGGATTTTCTTTCAACCAGAAAACAGCGAC TGCTGCAGCGCTTTTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNSVFRTRIDDAYCTDPANRLRWQKTLAFLQASPVALPKAVAGLDLGGRTPLTDVLEKFFDCPFHATAIDLDVEPLEGAY GVVTAFEVLEHLFNPLHALLQVRRVLAGQDARLFVSMPLAKPAMLASLDHFHEMSGDAALSLFTRAGFRVVRSDAFRIRK WPFYLTGLKPVLRAFYEKVVIYELEIC
Sequences:
>Translated_187_residues MNSVFRTRIDDAYCTDPANRLRWQKTLAFLQASPVALPKAVAGLDLGGRTPLTDVLEKFFDCPFHATAIDLDVEPLEGAY GVVTAFEVLEHLFNPLHALLQVRRVLAGQDARLFVSMPLAKPAMLASLDHFHEMSGDAALSLFTRAGFRVVRSDAFRIRK WPFYLTGLKPVLRAFYEKVVIYELEIC >Mature_187_residues MNSVFRTRIDDAYCTDPANRLRWQKTLAFLQASPVALPKAVAGLDLGGRTPLTDVLEKFFDCPFHATAIDLDVEPLEGAY GVVTAFEVLEHLFNPLHALLQVRRVLAGQDARLFVSMPLAKPAMLASLDHFHEMSGDAALSLFTRAGFRVVRSDAFRIRK WPFYLTGLKPVLRAFYEKVVIYELEIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21028; Mature: 21028
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVFRTRIDDAYCTDPANRLRWQKTLAFLQASPVALPKAVAGLDLGGRTPLTDVLEKFF CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHH DCPFHATAIDLDVEPLEGAYGVVTAFEVLEHLFNPLHALLQVRRVLAGQDARLFVSMPLA CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC KPAMLASLDHFHEMSGDAALSLFTRAGFRVVRSDAFRIRKWPFYLTGLKPVLRAFYEKVV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IYELEIC HEEEECC >Mature Secondary Structure MNSVFRTRIDDAYCTDPANRLRWQKTLAFLQASPVALPKAVAGLDLGGRTPLTDVLEKFF CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHH DCPFHATAIDLDVEPLEGAYGVVTAFEVLEHLFNPLHALLQVRRVLAGQDARLFVSMPLA CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC KPAMLASLDHFHEMSGDAALSLFTRAGFRVVRSDAFRIRKWPFYLTGLKPVLRAFYEKVV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH IYELEIC HEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA